RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 EPYCQ99645 322 aa12.53□□□□□ -0.4
USB1-214ENST00000568848 MCHR1Q99705 422 aa12.53□□□□□ -0.4
USB1-214ENST00000568848 EBF4Q9BQW3 602 aa12.53□□□□□ -0.4
USB1-214ENST00000568848 RMND5AQ9H871 391 aa12.53□□□□□ -0.4
USB1-214ENST00000568848 NTN4Q9HB63 628 aa12.53□□□□□ -0.4
USB1-214ENST00000568848 SDR39U1Q9NRG7 319 aaPredicted RBP12.53□□□□□ -0.4
USB1-214ENST00000568848 NKIRAS2Q9NYR9 191 aa12.53□□□□□ -0.4
USB1-214ENST00000568848 SELENONQ9NZV5 590 aa12.53□□□□□ -0.4
USB1-214ENST00000568848 ZIM2Q9NZV7 527 aa12.53□□□□□ -0.4
USB1-214ENST00000568848 TESQ9UGI8 421 aaKnown RBP12.53□□□□□ -0.4
USB1-214ENST00000568848 NUP50Q9UKX7 468 aa12.53□□□□□ -0.4
USB1-214ENST00000568848 MFN2O95140 757 aa12.52□□□□□ -0.41
USB1-214ENST00000568848 IGHV3-13P01766 116 aa12.52□□□□□ -0.41
USB1-214ENST00000568848 IGHV2-70P01814 119 aa12.52□□□□□ -0.41
USB1-214ENST00000568848 ETS2P15036 469 aa12.52□□□□□ -0.41
USB1-214ENST00000568848 H2AFXP16104 143 aaPredicted RBP12.52□□□□□ -0.41
USB1-214ENST00000568848 ZNF32P17041 273 aa12.52□□□□□ -0.41
USB1-214ENST00000568848 IDH3AP50213 366 aa12.52□□□□□ -0.41
USB1-214ENST00000568848 ERVK-25P63136 954 aa12.52□□□□□ -0.41
USB1-214ENST00000568848 TEKQ02763 1124 aa12.52□□□□□ -0.41
USB1-214ENST00000568848 HSF2Q03933 536 aa12.52□□□□□ -0.41
USB1-214ENST00000568848 SCARB2Q14108 478 aa12.52□□□□□ -0.41
USB1-214ENST00000568848 OTPQ5XKR4 325 aa12.52□□□□□ -0.41
USB1-214ENST00000568848 SPATC1Q76KD6 591 aa12.52□□□□□ -0.41
USB1-214ENST00000568848 HDXQ7Z353 690 aa12.52□□□□□ -0.41
USB1-214ENST00000568848 OR6S1Q8NH40 331 aa12.52□□□□□ -0.41
USB1-214ENST00000568848 ABHD4Q8TB40 342 aa12.52□□□□□ -0.41
USB1-214ENST00000568848 ST7LQ8TDW4 575 aa12.52□□□□□ -0.41
USB1-214ENST00000568848 NSMAFQ92636 917 aa12.52□□□□□ -0.41
USB1-214ENST00000568848 MARS2Q96GW9 593 aaKnown RBP12.52□□□□□ -0.41
USB1-214ENST00000568848 VAPAQ9P0L0 249 aa12.52□□□□□ -0.41
USB1-214ENST00000568848 TRIM33Q9UPN9 1127 aa12.52□□□□□ -0.41
USB1-214ENST00000568848 ANGPT4Q9Y264 503 aa12.52□□□□□ -0.41
USB1-214ENST00000568848 UGT2A1Q9Y4X1 527 aa12.52□□□□□ -0.41
USB1-214ENST00000568848 AUP1Q9Y679 476 aa12.52□□□□□ -0.41
USB1-214ENST00000568848 IGHV3-64DA0A0J9YX35 117 aa12.51□□□□□ -0.41
USB1-214ENST00000568848 C5orf49A4QMS7 147 aa12.51□□□□□ -0.41
USB1-214ENST00000568848 MGRN1O60291 552 aa12.51□□□□□ -0.41
USB1-214ENST00000568848 SNAP29O95721 258 aa12.51□□□□□ -0.41
USB1-214ENST00000568848 RNASE1P07998 156 aaKnown RBP12.51□□□□□ -0.41
USB1-214ENST00000568848 THRBP10828 461 aa12.51□□□□□ -0.41
USB1-214ENST00000568848 UMPSP11172 480 aa12.51□□□□□ -0.41
USB1-214ENST00000568848 FUT1P19526 365 aa12.51□□□□□ -0.41
USB1-214ENST00000568848 APLNRP35414 380 aa12.51□□□□□ -0.41
USB1-214ENST00000568848 ERFP50548 548 aa12.51□□□□□ -0.41
USB1-214ENST00000568848 CLRN1P58418 232 aa12.51□□□□□ -0.41
USB1-214ENST00000568848 KRTAP10-3P60369 221 aa12.51□□□□□ -0.41
USB1-214ENST00000568848 SELPLGQ14242 412 aa12.51□□□□□ -0.41
USB1-214ENST00000568848 ZMYND11Q15326 602 aa12.51□□□□□ -0.41
USB1-214ENST00000568848 DUSP7Q16829 419 aa12.51□□□□□ -0.41
USB1-214ENST00000568848 SLC36A2Q495M3 483 aa12.51□□□□□ -0.41
USB1-214ENST00000568848 ENTPD8Q5MY95 495 aa12.51□□□□□ -0.41
USB1-214ENST00000568848 REEP3Q6NUK4 255 aa12.51□□□□□ -0.41
USB1-214ENST00000568848 FUNDC1Q8IVP5 155 aa12.51□□□□□ -0.41
USB1-214ENST00000568848 TEX29Q8N6K0 151 aa12.51□□□□□ -0.41
USB1-214ENST00000568848 KIR3DL3Q8N743 410 aa12.51□□□□□ -0.41
USB1-214ENST00000568848 NOXO1Q8NFA2 376 aa12.51□□□□□ -0.41
USB1-214ENST00000568848 OR6T1Q8NGN1 323 aa12.51□□□□□ -0.41
USB1-214ENST00000568848 KLF14Q8TD94 323 aaPredicted RBP12.51□□□□□ -0.41
USB1-214ENST00000568848 DYDC1Q8WWB3 177 aa12.51□□□□□ -0.41
USB1-214ENST00000568848 SLC35B4Q969S0 331 aa12.51□□□□□ -0.41
USB1-214ENST00000568848 THOC1Q96FV9 657 aaKnown RBP12.51□□□□□ -0.41
USB1-214ENST00000568848 SLC25A44Q96H78 314 aaPredicted RBP12.51□□□□□ -0.41
USB1-214ENST00000568848 TMEM43Q9BTV4 400 aa12.51□□□□□ -0.41
USB1-214ENST00000568848 BCL2L14Q9BZR8 327 aa12.51□□□□□ -0.41
USB1-214ENST00000568848 DENND2DQ9H6A0 471 aaPredicted RBP12.51□□□□□ -0.41
USB1-214ENST00000568848 PLEK2Q9NYT0 353 aa12.51□□□□□ -0.41
USB1-214ENST00000568848 GPR160Q9UJ42 338 aa12.51□□□□□ -0.41
USB1-214ENST00000568848 NPTNQ9Y639 398 aa12.51□□□□□ -0.41
USB1-214ENST00000568848 IQCMA0A1B0GVH7 501 aa12.5□□□□□ -0.41
USB1-214ENST00000568848 SLC22A23A1A5C7 686 aa12.5□□□□□ -0.41
USB1-214ENST00000568848 POLR3GO15318 223 aaPredicted RBP12.5□□□□□ -0.41
USB1-214ENST00000568848 TRMUO75648 421 aaKnown RBP12.5□□□□□ -0.41
USB1-214ENST00000568848 SASH3O75995 380 aa12.5□□□□□ -0.41
USB1-214ENST00000568848 FARS2O95363 451 aaKnown RBP12.5□□□□□ -0.41
USB1-214ENST00000568848 ZNF12P17014 697 aa12.5□□□□□ -0.41
USB1-214ENST00000568848 STOMP27105 288 aa12.5□□□□□ -0.41
USB1-214ENST00000568848 ATP4BP51164 291 aa12.5□□□□□ -0.41
USB1-214ENST00000568848 FADDQ13158 208 aa12.5□□□□□ -0.41
USB1-214ENST00000568848 RUNDC3AQ59EK9 446 aa12.5□□□□□ -0.41
USB1-214ENST00000568848 LINC00114Q6XXX2 140 aa12.5□□□□□ -0.41
USB1-214ENST00000568848 RANBP3LQ86VV4 465 aaPredicted RBP12.5□□□□□ -0.41
USB1-214ENST00000568848 SNX32Q86XE0 403 aa12.5□□□□□ -0.41
USB1-214ENST00000568848 ARMC8Q8IUR7 673 aa12.5□□□□□ -0.41
USB1-214ENST00000568848 GOLGA6L1Q8N7Z2 621 aa12.5□□□□□ -0.41
USB1-214ENST00000568848 MOSPD2Q8NHP6 518 aa12.5□□□□□ -0.41
USB1-214ENST00000568848 PFN4Q8NHR9 129 aa12.5□□□□□ -0.41
USB1-214ENST00000568848 NABP1Q96AH0 204 aa12.5□□□□□ -0.41
USB1-214ENST00000568848 POM121L2Q96KW2 1035 aa12.5□□□□□ -0.41
USB1-214ENST00000568848 ARHGDIGQ99819 225 aa12.5□□□□□ -0.41
USB1-214ENST00000568848 RAD21L1Q9H4I0 556 aa12.5□□□□□ -0.41
USB1-214ENST00000568848 INTS9Q9NV88 658 aaKnown RBP12.5□□□□□ -0.41
USB1-214ENST00000568848 ARGLU1Q9NWB6 273 aaPredicted RBP12.5□□□□□ -0.41
USB1-214ENST00000568848 FBXL3Q9UKT7 428 aa12.5□□□□□ -0.41
USB1-214ENST00000568848 SLC7A7Q9UM01 511 aa12.5□□□□□ -0.41
USB1-214ENST00000568848 INSIG2Q9Y5U4 225 aa12.5□□□□□ -0.41
USB1-214ENST00000568848 A0A0G2JK05 382 aa12.49□□□□□ -0.41
USB1-214ENST00000568848 HMGB1P1B2RPK0 211 aaPredicted RBP12.49□□□□□ -0.41
USB1-214ENST00000568848 BLOC1S5-TXNDC5H3BN57 136 aa12.49□□□□□ -0.41
USB1-214ENST00000568848 SHOX2O60902 331 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms