RNA–Protein interactions for RNA: ENST00000568394.1

AC009041.2-204, humanhuman

TSL 1 (best) BASIC

Gene AC009041.2, Length 3,343 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.2-204ENST00000568394 SYT4Q9H2B2 425 aa18.03■□□□□ 0.48
AC009041.2-204ENST00000568394 ZNF736B4DX44 427 aaPredicted RBP18.02■□□□□ 0.48
AC009041.2-204ENST00000568394 SPI1P17947 270 aa18.02■□□□□ 0.48
AC009041.2-204ENST00000568394 ITGA3P26006 1051 aa18.02■□□□□ 0.48
AC009041.2-204ENST00000568394 CASRP41180 1078 aa18.02■□□□□ 0.48
AC009041.2-204ENST00000568394 CEBPGP53567 150 aa18.02■□□□□ 0.48
AC009041.2-204ENST00000568394 RPL13AP3Q6NVV1 102 aa18.02■□□□□ 0.48
AC009041.2-204ENST00000568394 ACOT7LQ6ZUV0 252 aa18.02■□□□□ 0.48
AC009041.2-204ENST00000568394 ZNF619Q8N2I2 560 aa18.02■□□□□ 0.48
AC009041.2-204ENST00000568394 METTL27Q8N6F8 245 aaPredicted RBP18.02■□□□□ 0.48
AC009041.2-204ENST00000568394 SLC27A6Q9Y2P4 619 aa18.02■□□□□ 0.48
AC009041.2-204ENST00000568394 IGKV1-8A0A0C4DH67 115 aa18.02■□□□□ 0.48
AC009041.2-204ENST00000568394 TMEM235A6NFC5 223 aa18.02■□□□□ 0.48
AC009041.2-204ENST00000568394 PRR32B1ATL7 298 aa18.02■□□□□ 0.48
AC009041.2-204ENST00000568394 SNAPC5O75971 98 aa18.02■□□□□ 0.48
AC009041.2-204ENST00000568394 MAP3K8P41279 467 aa18.02■□□□□ 0.48
AC009041.2-204ENST00000568394 C2orf76Q3KRA6 126 aa18.02■□□□□ 0.48
AC009041.2-204ENST00000568394 PARM1Q6UWI2 310 aa18.02■□□□□ 0.48
AC009041.2-204ENST00000568394 EID2Q8N6I1 236 aa18.02■□□□□ 0.48
AC009041.2-204ENST00000568394 OR6S1Q8NH40 331 aa18.02■□□□□ 0.48
AC009041.2-204ENST00000568394 FGF14Q92915 247 aa18.02■□□□□ 0.48
AC009041.2-204ENST00000568394 ZNF223Q9UK11 482 aaPredicted RBP18.02■□□□□ 0.48
AC009041.2-204ENST00000568394 XRCC3O43542 346 aa18.01■□□□□ 0.47
AC009041.2-204ENST00000568394 GPRIN2O60269 458 aa18.01■□□□□ 0.47
AC009041.2-204ENST00000568394 SNRNP200O75643 2136 aaKnown RBP18.01■□□□□ 0.47
AC009041.2-204ENST00000568394 DBIP07108 87 aaKnown RBP18.01■□□□□ 0.47
AC009041.2-204ENST00000568394 S100A10P60903 97 aa18.01■□□□□ 0.47
AC009041.2-204ENST00000568394 DEFB110Q30KQ9 67 aa18.01■□□□□ 0.47
AC009041.2-204ENST00000568394 SLC29A4Q7RTT9 530 aa18.01■□□□□ 0.47
AC009041.2-204ENST00000568394 CSAG2Q9Y5P2 127 aa18.01■□□□□ 0.47
AC009041.2-204ENST00000568394 SPINT1O43278 529 aa18.01■□□□□ 0.47
AC009041.2-204ENST00000568394 TACSTD2P09758 323 aa18.01■□□□□ 0.47
AC009041.2-204ENST00000568394 NR0B1P51843 470 aaKnown RBP18.01■□□□□ 0.47
AC009041.2-204ENST00000568394 IL10RAQ13651 578 aa18.01■□□□□ 0.47
AC009041.2-204ENST00000568394 HNRNPA1L2Q32P51 320 aaKnown RBP18.01■□□□□ 0.47
AC009041.2-204ENST00000568394 GFOD2Q3B7J2 385 aa18.01■□□□□ 0.47
AC009041.2-204ENST00000568394 KCNRGQ8N5I3 272 aa18.01■□□□□ 0.47
AC009041.2-204ENST00000568394 MKKSQ9NPJ1 570 aaPredicted RBP18.01■□□□□ 0.47
AC009041.2-204ENST00000568394 CTAG2O75638 210 aa18.01■□□□□ 0.47
AC009041.2-204ENST00000568394 PMS2P2O95744 297 aa18.01■□□□□ 0.47
AC009041.2-204ENST00000568394 NGFRP08138 427 aa18.01■□□□□ 0.47
AC009041.2-204ENST00000568394 MLC1Q15049 377 aa18.01■□□□□ 0.47
AC009041.2-204ENST00000568394 LY6G6FQ5SQ64 297 aa18.01■□□□□ 0.47
AC009041.2-204ENST00000568394 OR2A1Q8NGT9 310 aa18.01■□□□□ 0.47
AC009041.2-204ENST00000568394 CLCC1Q96S66 551 aa18.01■□□□□ 0.47
AC009041.2-204ENST00000568394 JAM3Q9BX67 310 aa18.01■□□□□ 0.47
AC009041.2-204ENST00000568394 TBX19O60806 448 aa18■□□□□ 0.47
AC009041.2-204ENST00000568394 ZNF432O94892 652 aa18■□□□□ 0.47
AC009041.2-204ENST00000568394 EFEMP2O95967 443 aa18■□□□□ 0.47
AC009041.2-204ENST00000568394 RAB11BQ15907 218 aa18■□□□□ 0.47
AC009041.2-204ENST00000568394 FAM3DQ96BQ1 224 aa18■□□□□ 0.47
AC009041.2-204ENST00000568394 KCNE5Q9UJ90 142 aa18■□□□□ 0.47
AC009041.2-204ENST00000568394 UNC13CQ8NB66 2214 aa18■□□□□ 0.47
AC009041.2-204ENST00000568394 ABCA7Q8IZY2 2146 aa18■□□□□ 0.47
AC009041.2-204ENST00000568394 A0A1W2PPV9 198 aa18■□□□□ 0.47
AC009041.2-204ENST00000568394 A0A1W2PQU0 124 aa18■□□□□ 0.47
AC009041.2-204ENST00000568394 OR2F2O95006 317 aa18■□□□□ 0.47
AC009041.2-204ENST00000568394 NID1P14543 1247 aa18■□□□□ 0.47
AC009041.2-204ENST00000568394 PTAFRP25105 342 aa18■□□□□ 0.47
AC009041.2-204ENST00000568394 GJA4P35212 333 aa18■□□□□ 0.47
AC009041.2-204ENST00000568394 OR2F1Q13607 317 aa18■□□□□ 0.47
AC009041.2-204ENST00000568394 TAF8Q7Z7C8 310 aa18■□□□□ 0.47
AC009041.2-204ENST00000568394 SYS1Q8N2H4 156 aa18■□□□□ 0.47
AC009041.2-204ENST00000568394 FOXRED1Q96CU9 486 aaPredicted RBP18■□□□□ 0.47
AC009041.2-204ENST00000568394 LMLNQ96KR4 655 aa18■□□□□ 0.47
AC009041.2-204ENST00000568394 ELF4Q99607 663 aaPredicted RBP18■□□□□ 0.47
AC009041.2-204ENST00000568394 KLHDC2Q9Y2U9 406 aa18■□□□□ 0.47
AC009041.2-204ENST00000568394 SLC22A7Q9Y694 548 aa18■□□□□ 0.47
AC009041.2-204ENST00000568394 CDC40O60508 579 aaKnown RBP eCLIP18■□□□□ 0.47
AC009041.2-204ENST00000568394 GNRH1P01148 92 aa18■□□□□ 0.47
AC009041.2-204ENST00000568394 IFNA6P05013 189 aa18■□□□□ 0.47
AC009041.2-204ENST00000568394 CALCBP10092 127 aa18■□□□□ 0.47
AC009041.2-204ENST00000568394 TLX1P31314 330 aaPredicted RBP18■□□□□ 0.47
AC009041.2-204ENST00000568394 ID4P47928 161 aa18■□□□□ 0.47
AC009041.2-204ENST00000568394 ILF3Q12906 894 aaKnown RBP eCLIP18■□□□□ 0.47
AC009041.2-204ENST00000568394 ALKBH1Q13686 389 aaKnown RBP18■□□□□ 0.47
AC009041.2-204ENST00000568394 ELAVL3Q14576 367 aaKnown RBP18■□□□□ 0.47
AC009041.2-204ENST00000568394 NCMAPQ5T1S8 102 aa18■□□□□ 0.47
AC009041.2-204ENST00000568394 OR52W1Q6IF63 320 aa18■□□□□ 0.47
AC009041.2-204ENST00000568394 GALNTL5Q7Z4T8 443 aa18■□□□□ 0.47
AC009041.2-204ENST00000568394 RNF113BQ8IZP6 322 aaKnown RBP18■□□□□ 0.47
AC009041.2-204ENST00000568394 OR2L13Q8N349 312 aa18■□□□□ 0.47
AC009041.2-204ENST00000568394 CAMKVQ8NCB2 501 aa18■□□□□ 0.47
AC009041.2-204ENST00000568394 C15orf40Q8WUR7 153 aa18■□□□□ 0.47
AC009041.2-204ENST00000568394 UQCC1Q9NVA1 299 aa18■□□□□ 0.47
AC009041.2-204ENST00000568394 ADAM29Q9UKF5 820 aa18■□□□□ 0.47
AC009041.2-204ENST00000568394 KLF2Q9Y5W3 355 aaPredicted RBP18■□□□□ 0.47
AC009041.2-204ENST00000568394 TPT1P13693 172 aaKnown RBP17.99■□□□□ 0.47
AC009041.2-204ENST00000568394 PI3P19957 117 aa17.99■□□□□ 0.47
AC009041.2-204ENST00000568394 SLC2A5P22732 501 aa17.99■□□□□ 0.47
AC009041.2-204ENST00000568394 ADH6P28332 368 aa17.99■□□□□ 0.47
AC009041.2-204ENST00000568394 DIO1P49895 249 aa17.99■□□□□ 0.47
AC009041.2-204ENST00000568394 EEF1A1P68104 462 aaKnown RBP17.99■□□□□ 0.47
AC009041.2-204ENST00000568394 POMGNT2Q8NAT1 580 aa17.99■□□□□ 0.47
AC009041.2-204ENST00000568394 SMIM3Q9BZL3 60 aa17.99■□□□□ 0.47
AC009041.2-204ENST00000568394 FRRS1LQ9P0K9 344 aa17.99■□□□□ 0.47
AC009041.2-204ENST00000568394 PLXNB3Q9ULL4 1909 aa17.99■□□□□ 0.47
AC009041.2-204ENST00000568394 MEX3AA1L020 520 aaKnown RBP17.99■□□□□ 0.47
AC009041.2-204ENST00000568394 MAPK3P27361 379 aaPredicted RBP17.99■□□□□ 0.47
AC009041.2-204ENST00000568394 RBM34P42696 430 aaKnown RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms