RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 PET100P0DJ07 73 aa6.91□□□□□ -1.3
ATXN3-250ENST00000568290 GABRA1P14867 456 aa6.91□□□□□ -1.3
ATXN3-250ENST00000568290 PVRP15151 417 aa6.91□□□□□ -1.3
ATXN3-250ENST00000568290 MGMTP16455 207 aa6.91□□□□□ -1.3
ATXN3-250ENST00000568290 FBLP22087 321 aaKnown RBP6.91□□□□□ -1.3
ATXN3-250ENST00000568290 MPZP25189 248 aa6.91□□□□□ -1.3
ATXN3-250ENST00000568290 CD1CP29017 333 aa6.91□□□□□ -1.3
ATXN3-250ENST00000568290 CCKBRP32239 447 aa6.91□□□□□ -1.3
ATXN3-250ENST00000568290 POU3F4P49335 361 aa6.91□□□□□ -1.3
ATXN3-250ENST00000568290 CSNK1EP49674 416 aaKnown RBP6.91□□□□□ -1.3
ATXN3-250ENST00000568290 STARP49675 285 aa6.91□□□□□ -1.3
ATXN3-250ENST00000568290 SLC37A1P57057 533 aa6.91□□□□□ -1.3
ATXN3-250ENST00000568290 HSD11B2P80365 405 aa6.91□□□□□ -1.3
ATXN3-250ENST00000568290 AANATQ16613 207 aa6.91□□□□□ -1.3
ATXN3-250ENST00000568290 LINC00303Q3SY05 128 aa6.91□□□□□ -1.3
ATXN3-250ENST00000568290 RNASE12Q5GAN4 147 aaKnown RBP6.91□□□□□ -1.3
ATXN3-250ENST00000568290 FNDC7Q5VTL7 733 aa6.91□□□□□ -1.3
ATXN3-250ENST00000568290 UQCC3Q6UW78 93 aa6.91□□□□□ -1.3
ATXN3-250ENST00000568290 GSG1LQ6UXU4 331 aa6.91□□□□□ -1.3
ATXN3-250ENST00000568290 UTS2BQ765I0 119 aa6.91□□□□□ -1.3
ATXN3-250ENST00000568290 PRSS45Q7RTY3 260 aa6.91□□□□□ -1.3
ATXN3-250ENST00000568290 DGLUCYQ7Z3D6 616 aa6.91□□□□□ -1.3
ATXN3-250ENST00000568290 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.91□□□□□ -1.3
ATXN3-250ENST00000568290 LRRTM1Q86UE6 522 aa6.91□□□□□ -1.3
ATXN3-250ENST00000568290 C12orf45Q8N5I9 185 aaPredicted RBP6.91□□□□□ -1.3
ATXN3-250ENST00000568290 EXD3Q8N9H8 876 aa6.91□□□□□ -1.3
ATXN3-250ENST00000568290 LRRC75AQ8NAA5 344 aa6.91□□□□□ -1.3
ATXN3-250ENST00000568290 INO80EQ8NBZ0 244 aaPredicted RBP6.91□□□□□ -1.3
ATXN3-250ENST00000568290 TMEM52Q8NDY8 209 aa6.91□□□□□ -1.3
ATXN3-250ENST00000568290 OR2AK2Q8NG84 335 aa6.91□□□□□ -1.3
ATXN3-250ENST00000568290 OR51L1Q8NGJ5 315 aa6.91□□□□□ -1.3
ATXN3-250ENST00000568290 OR5L2Q8NGL0 311 aa6.91□□□□□ -1.3
ATXN3-250ENST00000568290 OR13C5Q8NGS8 318 aa6.91□□□□□ -1.3
ATXN3-250ENST00000568290 OR6K3Q8NGY3 331 aa6.91□□□□□ -1.3
ATXN3-250ENST00000568290 OR4C3Q8NH37 302 aa6.91□□□□□ -1.3
ATXN3-250ENST00000568290 CCL4L1Q8NHW4 92 aa6.91□□□□□ -1.3
ATXN3-250ENST00000568290 FAM46BQ96A09 425 aa6.91□□□□□ -1.3
ATXN3-250ENST00000568290 ARSGQ96EG1 525 aa6.91□□□□□ -1.3
ATXN3-250ENST00000568290 MAP6Q96JE9 813 aa6.91□□□□□ -1.3
ATXN3-250ENST00000568290 SFXN2Q96NB2 322 aa6.91□□□□□ -1.3
ATXN3-250ENST00000568290 RBP7Q96R05 134 aa6.91□□□□□ -1.3
ATXN3-250ENST00000568290 ARL6Q9H0F7 186 aa6.91□□□□□ -1.3
ATXN3-250ENST00000568290 ATG5Q9H1Y0 275 aa6.91□□□□□ -1.3
ATXN3-250ENST00000568290 SLC6A15Q9H2J7 730 aa6.91□□□□□ -1.3
ATXN3-250ENST00000568290 AUNIPQ9H7T9 357 aa6.91□□□□□ -1.3
ATXN3-250ENST00000568290 PNO1Q9NRX1 252 aaKnown RBP6.91□□□□□ -1.3
ATXN3-250ENST00000568290 GPR27Q9NS67 375 aa6.91□□□□□ -1.3
ATXN3-250ENST00000568290 CUTCQ9NTM9 273 aa6.91□□□□□ -1.3
ATXN3-250ENST00000568290 SLCO1C1Q9NYB5 712 aa6.91□□□□□ -1.3
ATXN3-250ENST00000568290 FRRS1LQ9P0K9 344 aa6.91□□□□□ -1.3
ATXN3-250ENST00000568290 FBXL4Q9UKA2 621 aa6.91□□□□□ -1.3
ATXN3-250ENST00000568290 ZNF346Q9UL40 294 aaKnown RBP6.91□□□□□ -1.3
ATXN3-250ENST00000568290 NPIPA1Q9UND3 350 aa6.91□□□□□ -1.3
ATXN3-250ENST00000568290 PPIEQ9UNP9 301 aaKnown RBP6.91□□□□□ -1.3
ATXN3-250ENST00000568290 B9D1Q9UPM9 204 aa6.91□□□□□ -1.3
ATXN3-250ENST00000568290 R4GMQ9 66 aa6.91□□□□□ -1.3
ATXN3-250ENST00000568290 TRAV18A0A075B6X5 111 aa6.9□□□□□ -1.3
ATXN3-250ENST00000568290 TMEM82A0PJX8 343 aa6.9□□□□□ -1.3
ATXN3-250ENST00000568290 OR2M5A3KFT3 312 aa6.9□□□□□ -1.3
ATXN3-250ENST00000568290 SMLR1H3BR10 107 aa6.9□□□□□ -1.3
ATXN3-250ENST00000568290 GNB5O14775 395 aa6.9□□□□□ -1.3
ATXN3-250ENST00000568290 TOX3O15405 576 aaPredicted RBP6.9□□□□□ -1.3
ATXN3-250ENST00000568290 PIN1P1O15428 100 aa6.9□□□□□ -1.3
ATXN3-250ENST00000568290 EFSO43281 561 aa6.9□□□□□ -1.3
ATXN3-250ENST00000568290 ZNF208O43345 1280 aa6.9□□□□□ -1.3
ATXN3-250ENST00000568290 ABHD16AO95870 558 aa6.9□□□□□ -1.3
ATXN3-250ENST00000568290 BGLAPP02818 100 aa6.9□□□□□ -1.3
ATXN3-250ENST00000568290 TFPIP10646 304 aa6.9□□□□□ -1.3
ATXN3-250ENST00000568290 SLC25A4P12235 298 aa6.9□□□□□ -1.3
ATXN3-250ENST00000568290 NME1P15531 152 aaKnown RBP6.9□□□□□ -1.3
ATXN3-250ENST00000568290 GABRG2P18507 467 aa6.9□□□□□ -1.3
ATXN3-250ENST00000568290 CXCL3P19876 107 aa6.9□□□□□ -1.3
ATXN3-250ENST00000568290 CD27P26842 260 aa6.9□□□□□ -1.3
ATXN3-250ENST00000568290 HSD11B1P28845 292 aa6.9□□□□□ -1.3
ATXN3-250ENST00000568290 CD38P28907 300 aa6.9□□□□□ -1.3
ATXN3-250ENST00000568290 PTGS2P35354 604 aa6.9□□□□□ -1.3
ATXN3-250ENST00000568290 SOX2P48431 317 aa6.9□□□□□ -1.3
ATXN3-250ENST00000568290 C17orf67Q0P5P2 114 aa6.9□□□□□ -1.3
ATXN3-250ENST00000568290 FZD2Q14332 565 aa6.9□□□□□ -1.3
ATXN3-250ENST00000568290 PPA1Q15181 289 aa6.9□□□□□ -1.3
ATXN3-250ENST00000568290 MEP1BQ16820 701 aa6.9□□□□□ -1.3
ATXN3-250ENST00000568290 RNASE10Q5GAN6 216 aaKnown RBP6.9□□□□□ -1.3
ATXN3-250ENST00000568290 NHLRC3Q5JS37 347 aa6.9□□□□□ -1.3
ATXN3-250ENST00000568290 C1orf140Q5VVS0 124 aa6.9□□□□□ -1.3
ATXN3-250ENST00000568290 SEZ6L2Q6UXD5 910 aa6.9□□□□□ -1.3
ATXN3-250ENST00000568290 TMUB2Q71RG4 321 aa6.9□□□□□ -1.3
ATXN3-250ENST00000568290 PGAP1Q75T13 922 aa6.9□□□□□ -1.3
ATXN3-250ENST00000568290 NDUFAF7Q7L592 441 aa6.9□□□□□ -1.3
ATXN3-250ENST00000568290 CHMP1BQ7LBR1 199 aa6.9□□□□□ -1.3
ATXN3-250ENST00000568290 PRSS41Q7RTY9 318 aa6.9□□□□□ -1.3
ATXN3-250ENST00000568290 DPY19L4Q7Z388 723 aa6.9□□□□□ -1.3
ATXN3-250ENST00000568290 PRSS42Q7Z5A4 293 aa6.9□□□□□ -1.3
ATXN3-250ENST00000568290 ZAR1Q86SH2 424 aa6.9□□□□□ -1.3
ATXN3-250ENST00000568290 GPAT4Q86UL3 456 aa6.9□□□□□ -1.3
ATXN3-250ENST00000568290 SERPINA12Q8IW75 414 aa6.9□□□□□ -1.3
ATXN3-250ENST00000568290 GABRG1Q8N1C3 465 aa6.9□□□□□ -1.3
ATXN3-250ENST00000568290 BEST3Q8N1M1 668 aa6.9□□□□□ -1.3
ATXN3-250ENST00000568290 STPG2Q8N412 459 aa6.9□□□□□ -1.3
ATXN3-250ENST00000568290 ARL14Q8N4G2 192 aa6.9□□□□□ -1.3
ATXN3-250ENST00000568290 ARHGEF39Q8N4T4 335 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms