RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 RSPO3Q9BXY4 272 aaPredicted RBP4.77□□□□□ -1.65
CAPN3-217ENST00000567817 ACTR6Q9GZN1 396 aa4.77□□□□□ -1.65
CAPN3-217ENST00000567817 CHRNA10Q9GZZ6 450 aa4.77□□□□□ -1.65
CAPN3-217ENST00000567817 SLC25A18Q9H1K4 315 aa4.77□□□□□ -1.65
CAPN3-217ENST00000567817 TPK1Q9H3S4 243 aa4.77□□□□□ -1.65
CAPN3-217ENST00000567817 SLA2Q9H6Q3 261 aa4.77□□□□□ -1.65
CAPN3-217ENST00000567817 PPP1R3EQ9H7J1 279 aa4.77□□□□□ -1.65
CAPN3-217ENST00000567817 RNF121Q9H920 327 aa4.77□□□□□ -1.65
CAPN3-217ENST00000567817 UCK1Q9HA47 277 aa4.77□□□□□ -1.65
CAPN3-217ENST00000567817 Q9N2J8 555 aa4.77□□□□□ -1.65
CAPN3-217ENST00000567817 MKKSQ9NPJ1 570 aaPredicted RBP4.77□□□□□ -1.65
CAPN3-217ENST00000567817 HINT3Q9NQE9 182 aaKnown RBP4.77□□□□□ -1.65
CAPN3-217ENST00000567817 DDX28Q9NUL7 540 aaKnown RBP4.77□□□□□ -1.65
CAPN3-217ENST00000567817 EMC3Q9P0I2 261 aa4.77□□□□□ -1.65
CAPN3-217ENST00000567817 ZNF624Q9P2J8 865 aaPredicted RBP4.77□□□□□ -1.65
CAPN3-217ENST00000567817 PRODH2Q9UF12 536 aa4.77□□□□□ -1.65
CAPN3-217ENST00000567817 EPHA6Q9UF33 1036 aa4.77□□□□□ -1.65
CAPN3-217ENST00000567817 STEAP1Q9UHE8 339 aa4.77□□□□□ -1.65
CAPN3-217ENST00000567817 TEKT2Q9UIF3 430 aa4.77□□□□□ -1.65
CAPN3-217ENST00000567817 MRTO4Q9UKD2 239 aaKnown RBP4.77□□□□□ -1.65
CAPN3-217ENST00000567817 SLC7A7Q9UM01 511 aa4.77□□□□□ -1.65
CAPN3-217ENST00000567817 GPR52Q9Y2T5 361 aa4.77□□□□□ -1.65
CAPN3-217ENST00000567817 ITPR2Q14571 2701 aa4.77□□□□□ -1.65
CAPN3-217ENST00000567817 RELNP78509 3460 aa4.77□□□□□ -1.65
CAPN3-217ENST00000567817 KNL1Q8NG31 2342 aa4.77□□□□□ -1.65
CAPN3-217ENST00000567817 TRAV1-2A0A0B4J238 106 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 FAM240BA0A1B0GVZ2 78 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 OR5K3A6NET4 321 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 C12orf71A8MTZ7 269 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 B4DXG7 233 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 C10orf142B7Z368 130 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 C4orf51C9J302 202 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 H0YGG7 62 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 IMPA2O14732 288 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 ARPC3O15145 178 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 LYRM1O43325 122 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 GPRIN2O60269 458 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 PRAMEF2O60811 474 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 CTNSO60931 367 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 PTP4A3O75365 173 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 UBL3O95164 117 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 NDUFB2O95178 105 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 GP1BAP07359 652 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 SBK2P0C263 348 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 SAGP10523 405 aaPredicted RBP4.76□□□□□ -1.65
CAPN3-217ENST00000567817 PNMTP11086 282 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 PRG2P13727 222 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 NPR2P20594 1047 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 EPHA8P29322 1005 aaPredicted RBP4.76□□□□□ -1.65
CAPN3-217ENST00000567817 MAT2AP31153 395 aaKnown RBP4.76□□□□□ -1.65
CAPN3-217ENST00000567817 GABRA3P34903 492 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 RFX2P48378 723 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 RFX3P48380 749 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 CENPAP49450 140 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 CLDN20P56880 219 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 PRPS1P60891 318 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 ARF3P61204 181 aaPredicted RBP4.76□□□□□ -1.65
CAPN3-217ENST00000567817 MRPS10P82664 201 aaKnown RBP4.76□□□□□ -1.65
CAPN3-217ENST00000567817 FOXD4Q12950 439 aaPredicted RBP4.76□□□□□ -1.65
CAPN3-217ENST00000567817 RUNX2Q13950 521 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 IL18Q14116 193 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 SERTAD2Q14140 314 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 FAM53BQ14153 422 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 GPR18Q14330 331 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 CDK10Q15131 360 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 LTB4RQ15722 352 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 ZNF141Q15928 474 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 SLC22A10Q63ZE4 541 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 TMEM53Q6P2H8 277 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 PLBD1Q6P4A8 553 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 PAQR6Q6TCH4 344 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 ZNF813Q6ZN06 617 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 NANOGNBQ7Z5D8 188 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 OAFQ86UD1 273 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 LHFPL3Q86UP9 236 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 PLCZ1Q86YW0 608 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 KLBQ86Z14 1044 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 CPOQ8IVL8 374 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 CA13Q8N1Q1 262 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 ARL14Q8N4G2 192 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 EXD3Q8N9H8 876 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 OR7G1Q8NGA0 311 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 OR4F15Q8NGB8 312 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 OR6C4Q8NGE1 309 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 OR51G2Q8NGK0 314 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 OR5W2Q8NH69 310 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 OR10G6Q8NH81 332 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 ZCCHC10Q8TBK6 192 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 SAP25Q8TEE9 199 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 TMEM255BQ8WV15 326 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 SLC7A6Q92536 515 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 UCN3Q969E3 161 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 RFT1Q96AA3 541 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 RBM18Q96H35 190 aaKnown RBP4.76□□□□□ -1.65
CAPN3-217ENST00000567817 BMFQ96LC9 184 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 SAMD8Q96LT4 415 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 FCRL4Q96PJ5 515 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 HIST1H2AAQ96QV6 131 aa4.76□□□□□ -1.65
CAPN3-217ENST00000567817 CNN2Q99439 309 aaKnown RBP4.76□□□□□ -1.65
CAPN3-217ENST00000567817 ATF6BQ99941 703 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms