RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 PABPC1L2AQ5JQF8 200 aa7.3□□□□□ -1.24
CAPN3-213ENST00000565173 AVPI1Q5T686 147 aa7.3□□□□□ -1.24
CAPN3-213ENST00000565173 NANOGP8Q6NSW7 305 aa7.3□□□□□ -1.24
CAPN3-213ENST00000565173 ACSM5Q6NUN0 579 aa7.3□□□□□ -1.24
CAPN3-213ENST00000565173 TMEM154Q6P9G4 183 aa7.3□□□□□ -1.24
CAPN3-213ENST00000565173 USP43Q70EL4 1123 aa7.3□□□□□ -1.24
CAPN3-213ENST00000565173 NANOGNBQ7Z5D8 188 aa7.3□□□□□ -1.24
CAPN3-213ENST00000565173 ZNF101Q8IZC7 436 aa7.3□□□□□ -1.24
CAPN3-213ENST00000565173 RBM15BQ8NDT2 890 aaKnown RBP7.3□□□□□ -1.24
CAPN3-213ENST00000565173 NOXO1Q8NFA2 376 aa7.3□□□□□ -1.24
CAPN3-213ENST00000565173 OR1J2Q8NGS2 313 aa7.3□□□□□ -1.24
CAPN3-213ENST00000565173 OR1J1Q8NGS3 322 aa7.3□□□□□ -1.24
CAPN3-213ENST00000565173 MOSPD2Q8NHP6 518 aa7.3□□□□□ -1.24
CAPN3-213ENST00000565173 TMEM255BQ8WV15 326 aa7.3□□□□□ -1.24
CAPN3-213ENST00000565173 HDAC2Q92769 488 aaKnown RBP7.3□□□□□ -1.24
CAPN3-213ENST00000565173 MARS2Q96GW9 593 aaKnown RBP7.3□□□□□ -1.24
CAPN3-213ENST00000565173 POM121L2Q96KW2 1035 aa7.3□□□□□ -1.24
CAPN3-213ENST00000565173 MAGEB18Q96M61 343 aa7.3□□□□□ -1.24
CAPN3-213ENST00000565173 TMPRSS13Q9BYE2 586 aa7.3□□□□□ -1.24
CAPN3-213ENST00000565173 ZNF665Q9H7R5 613 aa7.3□□□□□ -1.24
CAPN3-213ENST00000565173 SIAEQ9HAT2 523 aa7.3□□□□□ -1.24
CAPN3-213ENST00000565173 CDH20Q9HBT6 801 aa7.3□□□□□ -1.24
CAPN3-213ENST00000565173 GPR160Q9UJ42 338 aa7.3□□□□□ -1.24
CAPN3-213ENST00000565173 RIMS3Q9UJD0 308 aa7.3□□□□□ -1.24
CAPN3-213ENST00000565173 KLHL21Q9UJP4 597 aa7.3□□□□□ -1.24
CAPN3-213ENST00000565173 SH3GLB1Q9Y371 365 aa7.3□□□□□ -1.24
CAPN3-213ENST00000565173 GRIP1Q9Y3R0 1128 aa7.3□□□□□ -1.24
CAPN3-213ENST00000565173 LOC105371242A0A075B767 164 aa7.29□□□□□ -1.24
CAPN3-213ENST00000565173 IGHV1-69-2A0A0G2JMI3 117 aa7.29□□□□□ -1.24
CAPN3-213ENST00000565173 IQCMA0A1B0GVH7 501 aa7.29□□□□□ -1.24
CAPN3-213ENST00000565173 NPIPB13A6NJU9 1138 aa7.29□□□□□ -1.24
CAPN3-213ENST00000565173 NPIPB4C9JG80 1138 aa7.29□□□□□ -1.24
CAPN3-213ENST00000565173 FXYD1O00168 92 aa7.29□□□□□ -1.24
CAPN3-213ENST00000565173 SHOX2O60902 331 aaPredicted RBP7.29□□□□□ -1.24
CAPN3-213ENST00000565173 OR5F1O95221 314 aa7.29□□□□□ -1.24
CAPN3-213ENST00000565173 IGHV1-46P01743 117 aa7.29□□□□□ -1.24
CAPN3-213ENST00000565173 IGHV2-5P01817 119 aa7.29□□□□□ -1.24
CAPN3-213ENST00000565173 ANPEPP15144 967 aa7.29□□□□□ -1.24
CAPN3-213ENST00000565173 ZNF32P17041 273 aa7.29□□□□□ -1.24
CAPN3-213ENST00000565173 STOMP27105 288 aa7.29□□□□□ -1.24
CAPN3-213ENST00000565173 MPV17P39210 176 aa7.29□□□□□ -1.24
CAPN3-213ENST00000565173 OR1E2P47887 323 aa7.29□□□□□ -1.24
CAPN3-213ENST00000565173 DAP3P51398 398 aaKnown RBP7.29□□□□□ -1.24
CAPN3-213ENST00000565173 ZNF84P51523 738 aa7.29□□□□□ -1.24
CAPN3-213ENST00000565173 HILS1P60008 231 aa7.29□□□□□ -1.24
CAPN3-213ENST00000565173 PSG4Q00888 419 aa7.29□□□□□ -1.24
CAPN3-213ENST00000565173 PLP2Q04941 152 aa7.29□□□□□ -1.24
CAPN3-213ENST00000565173 FMODQ06828 376 aa7.29□□□□□ -1.24
CAPN3-213ENST00000565173 PIN1Q13526 163 aaPredicted RBP7.29□□□□□ -1.24
CAPN3-213ENST00000565173 TSTQ16762 297 aaKnown RBP7.29□□□□□ -1.24
CAPN3-213ENST00000565173 RABL3Q5HYI8 236 aa7.29□□□□□ -1.24
CAPN3-213ENST00000565173 THEM4Q5T1C6 240 aa7.29□□□□□ -1.24
CAPN3-213ENST00000565173 INTS11Q5TA45 600 aaKnown RBP7.29□□□□□ -1.24
CAPN3-213ENST00000565173 FAM27BQ5VT28 67 aa7.29□□□□□ -1.24
CAPN3-213ENST00000565173 MBNL2Q5VZF2 373 aaKnown RBP7.29□□□□□ -1.24
CAPN3-213ENST00000565173 METTL21CQ5VZV1 264 aa7.29□□□□□ -1.24
CAPN3-213ENST00000565173 SLC25A47Q6Q0C1 308 aa7.29□□□□□ -1.24
CAPN3-213ENST00000565173 C12orf54Q6X4T0 127 aa7.29□□□□□ -1.24
CAPN3-213ENST00000565173 THSD4Q6ZMP0 1018 aa7.29□□□□□ -1.24
CAPN3-213ENST00000565173 USP51Q70EK9 711 aa7.29□□□□□ -1.24
CAPN3-213ENST00000565173 SLC26A7Q8TE54 656 aa7.29□□□□□ -1.24
CAPN3-213ENST00000565173 SNX33Q8WV41 574 aa7.29□□□□□ -1.24
CAPN3-213ENST00000565173 TMEM239Q8WW34 195 aa7.29□□□□□ -1.24
CAPN3-213ENST00000565173 RASSF5Q8WWW0 418 aa7.29□□□□□ -1.24
CAPN3-213ENST00000565173 SGTBQ96EQ0 304 aa7.29□□□□□ -1.24
CAPN3-213ENST00000565173 PLA2G12AQ9BZM1 189 aa7.29□□□□□ -1.24
CAPN3-213ENST00000565173 POLR2J2Q9GZM3 115 aaKnown RBP7.29□□□□□ -1.24
CAPN3-213ENST00000565173 POLR2J3Q9H1A7 115 aaKnown RBP7.29□□□□□ -1.24
CAPN3-213ENST00000565173 LRMDAQ9H2I8 198 aa7.29□□□□□ -1.24
CAPN3-213ENST00000565173 SMURF2Q9HAU4 748 aa7.29□□□□□ -1.24
CAPN3-213ENST00000565173 INIPQ9NRY2 104 aa7.29□□□□□ -1.24
CAPN3-213ENST00000565173 OPN4Q9UHM6 478 aa7.29□□□□□ -1.24
CAPN3-213ENST00000565173 PCDHB10Q9UN67 800 aa7.29□□□□□ -1.24
CAPN3-213ENST00000565173 WIPI2Q9Y4P8 454 aa7.29□□□□□ -1.24
CAPN3-213ENST00000565173 TMEM89A2RUT3 159 aa7.28□□□□□ -1.24
CAPN3-213ENST00000565173 MCIDASD6RGH6 385 aa7.28□□□□□ -1.24
CAPN3-213ENST00000565173 ICMTO60725 284 aa7.28□□□□□ -1.24
CAPN3-213ENST00000565173 EDF1O60869 148 aaKnown RBP7.28□□□□□ -1.24
CAPN3-213ENST00000565173 RGS9O75916 674 aaPredicted RBP7.28□□□□□ -1.24
CAPN3-213ENST00000565173 UBOX5O94941 541 aa7.28□□□□□ -1.24
CAPN3-213ENST00000565173 MPZL1O95297 269 aa7.28□□□□□ -1.24
CAPN3-213ENST00000565173 MAKP20794 623 aa7.28□□□□□ -1.24
CAPN3-213ENST00000565173 EPHA1P21709 976 aa7.28□□□□□ -1.24
CAPN3-213ENST00000565173 APLNRP35414 380 aa7.28□□□□□ -1.24
CAPN3-213ENST00000565173 ZNF81P51508 661 aa7.28□□□□□ -1.24
CAPN3-213ENST00000565173 TAS2R41P59536 307 aa7.28□□□□□ -1.24
CAPN3-213ENST00000565173 ERVK-25P63136 954 aa7.28□□□□□ -1.24
CAPN3-213ENST00000565173 GUCY1A3Q02108 690 aa7.28□□□□□ -1.24
CAPN3-213ENST00000565173 TEKQ02763 1124 aa7.28□□□□□ -1.24
CAPN3-213ENST00000565173 HSF2Q03933 536 aa7.28□□□□□ -1.24
CAPN3-213ENST00000565173 GLO1Q04760 184 aa7.28□□□□□ -1.24
CAPN3-213ENST00000565173 HNRNPA0Q13151 305 aaKnown RBP7.28□□□□□ -1.24
CAPN3-213ENST00000565173 FHL1Q13642 323 aa7.28□□□□□ -1.24
CAPN3-213ENST00000565173 CYLC2Q14093 348 aaPredicted RBP7.28□□□□□ -1.24
CAPN3-213ENST00000565173 MOGQ16653 247 aa7.28□□□□□ -1.24
CAPN3-213ENST00000565173 SPRNQ5BIV9 151 aa7.28□□□□□ -1.24
CAPN3-213ENST00000565173 FAM209AQ5JX71 171 aa7.28□□□□□ -1.24
CAPN3-213ENST00000565173 SPATA46Q5T0L3 261 aa7.28□□□□□ -1.24
CAPN3-213ENST00000565173 C1QL2Q7Z5L3 287 aa7.28□□□□□ -1.24
CAPN3-213ENST00000565173 PEG10Q86TG7 708 aaKnown RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms