RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 ARIH2OSQ8N7S6 290 aa26.54■■□□□ 1.84
CMTM4-204ENST00000563952 SLC30A7Q8NEW0 376 aa26.54■■□□□ 1.84
CMTM4-204ENST00000563952 FNDC8Q8TC99 324 aa26.54■■□□□ 1.84
CMTM4-204ENST00000563952 RSRC1Q96IZ7 334 aaKnown RBP26.54■■□□□ 1.84
CMTM4-204ENST00000563952 CMAHPQ9Y471 501 aa26.54■■□□□ 1.84
CMTM4-204ENST00000563952 FKBP7Q9Y680 259 aa26.54■■□□□ 1.84
CMTM4-204ENST00000563952 F12P00748 615 aaPredicted RBP26.53■■□□□ 1.84
CMTM4-204ENST00000563952 RINLQ6ZS11 566 aa26.53■■□□□ 1.84
CMTM4-204ENST00000563952 NABP1Q96AH0 204 aa26.53■■□□□ 1.84
CMTM4-204ENST00000563952 FUZQ9BT04 418 aa26.53■■□□□ 1.84
CMTM4-204ENST00000563952 CCNB1IP1Q9NPC3 277 aa26.53■■□□□ 1.84
CMTM4-204ENST00000563952 SIGLEC7Q9Y286 467 aa26.53■■□□□ 1.84
CMTM4-204ENST00000563952 NF1P21359 2839 aa26.52■■□□□ 1.84
CMTM4-204ENST00000563952 SH3PXD2BA1X283 911 aa26.52■■□□□ 1.84
CMTM4-204ENST00000563952 UNC119BA6NIH7 251 aa26.52■■□□□ 1.84
CMTM4-204ENST00000563952 NDUFB2O95178 105 aa26.52■■□□□ 1.84
CMTM4-204ENST00000563952 CCL2P13500 99 aa26.52■■□□□ 1.84
CMTM4-204ENST00000563952 CALB2P22676 271 aa26.52■■□□□ 1.84
CMTM4-204ENST00000563952 PLP2Q04941 152 aa26.52■■□□□ 1.84
CMTM4-204ENST00000563952 OR10H5Q8NGA6 315 aa26.52■■□□□ 1.84
CMTM4-204ENST00000563952 FAM168AQ92567 244 aa26.52■■□□□ 1.84
CMTM4-204ENST00000563952 Q96M85 177 aa26.52■■□□□ 1.84
CMTM4-204ENST00000563952 ZNF570Q96NI8 536 aa26.52■■□□□ 1.84
CMTM4-204ENST00000563952 CDH20Q9HBT6 801 aa26.52■■□□□ 1.84
CMTM4-204ENST00000563952 ADAM21Q9UKJ8 722 aa26.52■■□□□ 1.84
CMTM4-204ENST00000563952 CR1P17927 2039 aa26.51■■□□□ 1.83
CMTM4-204ENST00000563952 IQCMA0A1B0GVH7 501 aa26.51■■□□□ 1.83
CMTM4-204ENST00000563952 A0A1W2PPL8 197 aa26.51■■□□□ 1.83
CMTM4-204ENST00000563952 TMEM129A0AVI4 362 aa26.51■■□□□ 1.83
CMTM4-204ENST00000563952 XKRYO14609 159 aa26.51■■□□□ 1.83
CMTM4-204ENST00000563952 MGRN1O60291 552 aa26.51■■□□□ 1.83
CMTM4-204ENST00000563952 PTP4A3O75365 173 aa26.51■■□□□ 1.83
CMTM4-204ENST00000563952 ATP6V1B2P21281 511 aa26.51■■□□□ 1.83
CMTM4-204ENST00000563952 PPOXP50336 477 aa26.51■■□□□ 1.83
CMTM4-204ENST00000563952 HSF2Q03933 536 aa26.51■■□□□ 1.83
CMTM4-204ENST00000563952 ZDHHC21Q8IVQ6 265 aa26.51■■□□□ 1.83
CMTM4-204ENST00000563952 DOK1Q99704 481 aa26.51■■□□□ 1.83
CMTM4-204ENST00000563952 DYNLRB1Q9NP97 96 aa26.51■■□□□ 1.83
CMTM4-204ENST00000563952 IL1RAPQ9NPH3 570 aa26.51■■□□□ 1.83
CMTM4-204ENST00000563952 FAM53CQ9NYF3 392 aa26.51■■□□□ 1.83
CMTM4-204ENST00000563952 IL20RAQ9UHF4 553 aa26.51■■□□□ 1.83
CMTM4-204ENST00000563952 SLC7A8Q9UHI5 535 aa26.51■■□□□ 1.83
CMTM4-204ENST00000563952 PTHP01270 115 aa26.5■■□□□ 1.83
CMTM4-204ENST00000563952 MMP7P09237 267 aaPredicted RBP26.5■■□□□ 1.83
CMTM4-204ENST00000563952 RRM2P31350 389 aa26.5■■□□□ 1.83
CMTM4-204ENST00000563952 GLRXP35754 106 aa26.5■■□□□ 1.83
CMTM4-204ENST00000563952 RPS23P62266 143 aaKnown RBP26.5■■□□□ 1.83
CMTM4-204ENST00000563952 MSMPQ1L6U9 139 aa26.5■■□□□ 1.83
CMTM4-204ENST00000563952 TBC1D28Q2M2D7 210 aa26.5■■□□□ 1.83
CMTM4-204ENST00000563952 MESTQ5EB52 335 aa26.5■■□□□ 1.83
CMTM4-204ENST00000563952 PAQR4Q8N4S7 273 aaPredicted RBP26.5■■□□□ 1.83
CMTM4-204ENST00000563952 MRPL24Q96A35 216 aaKnown RBP26.5■■□□□ 1.83
CMTM4-204ENST00000563952 MRPL37Q9BZE1 423 aaKnown RBP26.5■■□□□ 1.83
CMTM4-204ENST00000563952 C1orf198Q9H425 327 aa26.5■■□□□ 1.83
CMTM4-204ENST00000563952 ACTR3BQ9P1U1 418 aa26.5■■□□□ 1.83
CMTM4-204ENST00000563952 FBXO9Q9UK97 447 aaPredicted RBP26.5■■□□□ 1.83
CMTM4-204ENST00000563952 TEX13CA0A0J9YWL9 993 aa26.49■■□□□ 1.83
CMTM4-204ENST00000563952 FAM157BP0CG42 384 aa26.49■■□□□ 1.83
CMTM4-204ENST00000563952 T-ENOLP0DO92 83 aa26.49■■□□□ 1.83
CMTM4-204ENST00000563952 HOXB4P17483 251 aaPredicted RBP26.49■■□□□ 1.83
CMTM4-204ENST00000563952 GUCA1AP43080 201 aaPredicted RBP26.49■■□□□ 1.83
CMTM4-204ENST00000563952 PABPC1L2AQ5JQF8 200 aa26.49■■□□□ 1.83
CMTM4-204ENST00000563952 THSD4Q6ZMP0 1018 aa26.49■■□□□ 1.83
CMTM4-204ENST00000563952 FAM122BQ7Z309 247 aa26.49■■□□□ 1.83
CMTM4-204ENST00000563952 ARHGAP24Q8N264 748 aa26.49■■□□□ 1.83
CMTM4-204ENST00000563952 RASD2Q96D21 266 aa26.49■■□□□ 1.83
CMTM4-204ENST00000563952 GPA33Q99795 319 aa26.49■■□□□ 1.83
CMTM4-204ENST00000563952 SYT3Q9BQG1 590 aa26.49■■□□□ 1.83
CMTM4-204ENST00000563952 RAB1BQ9H0U4 201 aa26.49■■□□□ 1.83
CMTM4-204ENST00000563952 OR51B6Q9H340 312 aa26.49■■□□□ 1.83
CMTM4-204ENST00000563952 FZR1Q9UM11 496 aa26.49■■□□□ 1.83
CMTM4-204ENST00000563952 CSF3P09919 207 aa26.48■■□□□ 1.83
CMTM4-204ENST00000563952 ZNF32P17041 273 aa26.48■■□□□ 1.83
CMTM4-204ENST00000563952 APEX1P27695 318 aaKnown RBP26.48■■□□□ 1.83
CMTM4-204ENST00000563952 LAP3P28838 519 aa26.48■■□□□ 1.83
CMTM4-204ENST00000563952 KRR1Q13601 381 aaKnown RBP26.48■■□□□ 1.83
CMTM4-204ENST00000563952 CARTPTQ16568 116 aa26.48■■□□□ 1.83
CMTM4-204ENST00000563952 FAM27BQ5VT28 67 aa26.48■■□□□ 1.83
CMTM4-204ENST00000563952 ZCCHC24Q8N2G6 241 aaKnown RBP26.48■■□□□ 1.83
CMTM4-204ENST00000563952 OR1J2Q8NGS2 313 aa26.48■■□□□ 1.83
CMTM4-204ENST00000563952 C10orf105Q8TEF2 133 aa26.48■■□□□ 1.83
CMTM4-204ENST00000563952 POM121Q96HA1 1249 aa26.48■■□□□ 1.83
CMTM4-204ENST00000563952 TMCC3Q9ULS5 477 aa26.48■■□□□ 1.83
CMTM4-204ENST00000563952 ZFHX3Q15911 3703 aa26.48■■□□□ 1.83
CMTM4-204ENST00000563952 ZANQ9Y493 2812 aa26.47■■□□□ 1.83
CMTM4-204ENST00000563952 SLC22A23A1A5C7 686 aa26.47■■□□□ 1.83
CMTM4-204ENST00000563952 OR10H3O60404 316 aa26.47■■□□□ 1.83
CMTM4-204ENST00000563952 APLNRP35414 380 aa26.47■■□□□ 1.83
CMTM4-204ENST00000563952 FXYD6P3P58550 94 aa26.47■■□□□ 1.83
CMTM4-204ENST00000563952 ZER1Q7Z7L7 766 aa26.47■■□□□ 1.83
CMTM4-204ENST00000563952 CPEB3Q8NE35 698 aaKnown RBP26.47■■□□□ 1.83
CMTM4-204ENST00000563952 LRMDAQ9H2I8 198 aa26.47■■□□□ 1.83
CMTM4-204ENST00000563952 NRIP3Q9NQ35 241 aa26.47■■□□□ 1.83
CMTM4-204ENST00000563952 IER3IP1Q9Y5U9 82 aa26.47■■□□□ 1.83
CMTM4-204ENST00000563952 PRSS37A4D1T9 235 aa26.46■■□□□ 1.83
CMTM4-204ENST00000563952 ERCC1P07992 297 aaPredicted RBP26.46■■□□□ 1.83
CMTM4-204ENST00000563952 ADRA2AP08913 450 aa26.46■■□□□ 1.83
CMTM4-204ENST00000563952 SLC25A16P16260 332 aa26.46■■□□□ 1.83
CMTM4-204ENST00000563952 SDHAP31040 664 aa26.46■■□□□ 1.83
CMTM4-204ENST00000563952 PDLIM4P50479 330 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms