RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 FAM157BP0CG42 384 aa14.72□□□□□ -0.05
VPS9D1-203ENST00000563798 NAT2P11245 290 aa14.72□□□□□ -0.05
VPS9D1-203ENST00000563798 CCL2P13500 99 aa14.72□□□□□ -0.05
VPS9D1-203ENST00000563798 MYBPC1Q00872 1141 aa14.72□□□□□ -0.05
VPS9D1-203ENST00000563798 LAPTM4AQ15012 233 aa14.72□□□□□ -0.05
VPS9D1-203ENST00000563798 ANKDD1AQ495B1 522 aa14.72□□□□□ -0.05
VPS9D1-203ENST00000563798 SLC25A47Q6Q0C1 308 aa14.72□□□□□ -0.05
VPS9D1-203ENST00000563798 MICU2Q8IYU8 434 aa14.72□□□□□ -0.05
VPS9D1-203ENST00000563798 RFLNBQ8N5W9 214 aa14.72□□□□□ -0.05
VPS9D1-203ENST00000563798 CPEB3Q8NE35 698 aaKnown RBP14.72□□□□□ -0.05
VPS9D1-203ENST00000563798 CLDND2Q8NHS1 167 aa14.72□□□□□ -0.05
VPS9D1-203ENST00000563798 FNDC8Q8TC99 324 aa14.72□□□□□ -0.05
VPS9D1-203ENST00000563798 C11orf40Q8WZ69 217 aa14.72□□□□□ -0.05
VPS9D1-203ENST00000563798 HDAC2Q92769 488 aaKnown RBP14.72□□□□□ -0.05
VPS9D1-203ENST00000563798 ALG12Q9BV10 488 aa14.72□□□□□ -0.05
VPS9D1-203ENST00000563798 HINT3Q9NQE9 182 aaKnown RBP14.72□□□□□ -0.05
VPS9D1-203ENST00000563798 ZNF275Q9NSD4 429 aaPredicted RBP14.72□□□□□ -0.05
VPS9D1-203ENST00000563798 TAAR3PQ9P1P4 343 aa14.72□□□□□ -0.05
VPS9D1-203ENST00000563798 ELOVL7A1L3X0 281 aa14.71□□□□□ -0.05
VPS9D1-203ENST00000563798 ICMTO60725 284 aa14.71□□□□□ -0.05
VPS9D1-203ENST00000563798 IGHV3-13P01766 116 aa14.71□□□□□ -0.05
VPS9D1-203ENST00000563798 MOGQ16653 247 aa14.71□□□□□ -0.05
VPS9D1-203ENST00000563798 NKPD1Q17RQ9 610 aa14.71□□□□□ -0.05
VPS9D1-203ENST00000563798 ALG10Q5BKT4 473 aa14.71□□□□□ -0.05
VPS9D1-203ENST00000563798 PABPC1L2AQ5JQF8 200 aa14.71□□□□□ -0.05
VPS9D1-203ENST00000563798 FAM27BQ5VT28 67 aa14.71□□□□□ -0.05
VPS9D1-203ENST00000563798 FOXL2NBQ6ZUU3 175 aa14.71□□□□□ -0.05
VPS9D1-203ENST00000563798 C1orf174Q8IYL3 243 aa14.71□□□□□ -0.05
VPS9D1-203ENST00000563798 LRRC75AQ8NAA5 344 aa14.71□□□□□ -0.05
VPS9D1-203ENST00000563798 BPIFA2Q96DR5 249 aa14.71□□□□□ -0.05
VPS9D1-203ENST00000563798 C19orf24Q9BVV8 132 aa14.71□□□□□ -0.05
VPS9D1-203ENST00000563798 KCNN2Q9H2S1 579 aa14.71□□□□□ -0.05
VPS9D1-203ENST00000563798 CCDC134Q9H6E4 229 aa14.71□□□□□ -0.05
VPS9D1-203ENST00000563798 IGKV1D-43A0A0B4J1Z2 117 aa14.7□□□□□ -0.06
VPS9D1-203ENST00000563798 SLC2A10O95528 541 aa14.7□□□□□ -0.06
VPS9D1-203ENST00000563798 LCKP06239 509 aa14.7□□□□□ -0.06
VPS9D1-203ENST00000563798 SAGP10523 405 aaPredicted RBP14.7□□□□□ -0.06
VPS9D1-203ENST00000563798 IFNA8P32881 189 aa14.7□□□□□ -0.06
VPS9D1-203ENST00000563798 APLNRP35414 380 aa14.7□□□□□ -0.06
VPS9D1-203ENST00000563798 MAGEB1P43366 347 aa14.7□□□□□ -0.06
VPS9D1-203ENST00000563798 RPL27P61353 136 aaKnown RBP14.7□□□□□ -0.06
VPS9D1-203ENST00000563798 ERVS71-1P61550 626 aa14.7□□□□□ -0.06
VPS9D1-203ENST00000563798 LMO4P61968 165 aa14.7□□□□□ -0.06
VPS9D1-203ENST00000563798 FHL1Q13642 323 aa14.7□□□□□ -0.06
VPS9D1-203ENST00000563798 CCNIQ14094 377 aa14.7□□□□□ -0.06
VPS9D1-203ENST00000563798 LRRC23Q53EV4 343 aaPredicted RBP14.7□□□□□ -0.06
VPS9D1-203ENST00000563798 THEM4Q5T1C6 240 aa14.7□□□□□ -0.06
VPS9D1-203ENST00000563798 LIPNQ5VXI9 398 aa14.7□□□□□ -0.06
VPS9D1-203ENST00000563798 FAM205BPQ63HN1 556 aa14.7□□□□□ -0.06
VPS9D1-203ENST00000563798 ARPINQ7Z6K5 226 aa14.7□□□□□ -0.06
VPS9D1-203ENST00000563798 GLCCI1Q86VQ1 547 aa14.7□□□□□ -0.06
VPS9D1-203ENST00000563798 OFCC1Q8IZS5 231 aa14.7□□□□□ -0.06
VPS9D1-203ENST00000563798 LRRC18Q8N456 261 aa14.7□□□□□ -0.06
VPS9D1-203ENST00000563798 FAM156AQ8NDB6 213 aa14.7□□□□□ -0.06
VPS9D1-203ENST00000563798 LZICQ8WZA0 190 aa14.7□□□□□ -0.06
VPS9D1-203ENST00000563798 POM121L2Q96KW2 1035 aa14.7□□□□□ -0.06
VPS9D1-203ENST00000563798 TSPAN32Q96QS1 320 aa14.7□□□□□ -0.06
VPS9D1-203ENST00000563798 MAN2C1Q9NTJ4 1040 aa14.7□□□□□ -0.06
VPS9D1-203ENST00000563798 CMTM6Q9NX76 183 aa14.7□□□□□ -0.06
VPS9D1-203ENST00000563798 CAPN7Q9Y6W3 813 aa14.7□□□□□ -0.06
VPS9D1-203ENST00000563798 WNT9BO14905 357 aa14.69□□□□□ -0.06
VPS9D1-203ENST00000563798 PIP5K1CO60331 668 aa14.69□□□□□ -0.06
VPS9D1-203ENST00000563798 IFI30P13284 250 aa14.69□□□□□ -0.06
VPS9D1-203ENST00000563798 ZNF32P17041 273 aa14.69□□□□□ -0.06
VPS9D1-203ENST00000563798 STOMP27105 288 aa14.69□□□□□ -0.06
VPS9D1-203ENST00000563798 CDAP32320 146 aa14.69□□□□□ -0.06
VPS9D1-203ENST00000563798 CRYBB2P43320 205 aa14.69□□□□□ -0.06
VPS9D1-203ENST00000563798 HSF2Q03933 536 aa14.69□□□□□ -0.06
VPS9D1-203ENST00000563798 PRKCDQ05655 676 aa14.69□□□□□ -0.06
VPS9D1-203ENST00000563798 FMODQ06828 376 aa14.69□□□□□ -0.06
VPS9D1-203ENST00000563798 TMEM154Q6P9G4 183 aa14.69□□□□□ -0.06
VPS9D1-203ENST00000563798 RNF113BQ8IZP6 322 aaKnown RBP14.69□□□□□ -0.06
VPS9D1-203ENST00000563798 RP9Q8TA86 221 aaKnown RBP14.69□□□□□ -0.06
VPS9D1-203ENST00000563798 SNX33Q8WV41 574 aa14.69□□□□□ -0.06
VPS9D1-203ENST00000563798 TPD52L3Q96J77 140 aa14.69□□□□□ -0.06
VPS9D1-203ENST00000563798 RBP7Q96R05 134 aa14.69□□□□□ -0.06
VPS9D1-203ENST00000563798 CCNB1IP1Q9NPC3 277 aa14.69□□□□□ -0.06
VPS9D1-203ENST00000563798 LOC100509620A0A075B734 347 aa14.68□□□□□ -0.06
VPS9D1-203ENST00000563798 FAM157AC9JC47 383 aa14.68□□□□□ -0.06
VPS9D1-203ENST00000563798 FFAR1O14842 300 aa14.68□□□□□ -0.06
VPS9D1-203ENST00000563798 MSMBP08118 114 aa14.68□□□□□ -0.06
VPS9D1-203ENST00000563798 CST2P09228 141 aa14.68□□□□□ -0.06
VPS9D1-203ENST00000563798 GAAP10253 952 aa14.68□□□□□ -0.06
VPS9D1-203ENST00000563798 MAKP20794 623 aa14.68□□□□□ -0.06
VPS9D1-203ENST00000563798 FUT4P22083 530 aa14.68□□□□□ -0.06
VPS9D1-203ENST00000563798 WNT5AP41221 380 aa14.68□□□□□ -0.06
VPS9D1-203ENST00000563798 PSG4Q00888 419 aa14.68□□□□□ -0.06
VPS9D1-203ENST00000563798 TEKQ02763 1124 aa14.68□□□□□ -0.06
VPS9D1-203ENST00000563798 CD47Q08722 323 aa14.68□□□□□ -0.06
VPS9D1-203ENST00000563798 UNQ6126/PRO20091Q6UXV3 157 aa14.68□□□□□ -0.06
VPS9D1-203ENST00000563798 SLC15A3Q8IY34 581 aa14.68□□□□□ -0.06
VPS9D1-203ENST00000563798 OR1J1Q8NGS3 322 aa14.68□□□□□ -0.06
VPS9D1-203ENST00000563798 TMEM186Q96B77 213 aa14.68□□□□□ -0.06
VPS9D1-203ENST00000563798 RCN3Q96D15 328 aa14.68□□□□□ -0.06
VPS9D1-203ENST00000563798 MARS2Q96GW9 593 aaKnown RBP14.68□□□□□ -0.06
VPS9D1-203ENST00000563798 WACQ9BTA9 647 aa14.68□□□□□ -0.06
VPS9D1-203ENST00000563798 A6NIZ1 184 aa14.67□□□□□ -0.06
VPS9D1-203ENST00000563798 H3BSA7 217 aa14.67□□□□□ -0.06
VPS9D1-203ENST00000563798 PPIHO43447 177 aaKnown RBP14.67□□□□□ -0.06
VPS9D1-203ENST00000563798 TCF21O43680 179 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms