RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 A0A087WUV0 522 aaPredicted RBP6.39□□□□□ -1.39
HERPUD1-206ENST00000563343 A0A1W2PPM1 405 aa6.39□□□□□ -1.39
HERPUD1-206ENST00000563343 C22orf46C9J442 243 aa6.39□□□□□ -1.39
HERPUD1-206ENST00000563343 XPNPEP2O43895 674 aa6.39□□□□□ -1.39
HERPUD1-206ENST00000563343 ICMTO60725 284 aa6.39□□□□□ -1.39
HERPUD1-206ENST00000563343 GLRA3O75311 464 aa6.39□□□□□ -1.39
HERPUD1-206ENST00000563343 CPSF4O95639 269 aaKnown RBP6.39□□□□□ -1.39
HERPUD1-206ENST00000563343 CHEK2O96017 543 aa6.39□□□□□ -1.39
HERPUD1-206ENST00000563343 BGLAPP02818 100 aa6.39□□□□□ -1.39
HERPUD1-206ENST00000563343 RPS2P15880 293 aaKnown RBP6.39□□□□□ -1.39
HERPUD1-206ENST00000563343 ECHS1P30084 290 aa6.39□□□□□ -1.39
HERPUD1-206ENST00000563343 CRHR1P34998 444 aa6.39□□□□□ -1.39
HERPUD1-206ENST00000563343 CSNK1A1P48729 337 aa6.39□□□□□ -1.39
HERPUD1-206ENST00000563343 EFNB2P52799 333 aa6.39□□□□□ -1.39
HERPUD1-206ENST00000563343 PCBP3P57721 371 aaKnown RBP6.39□□□□□ -1.39
HERPUD1-206ENST00000563343 HOXC5Q00444 222 aa6.39□□□□□ -1.39
HERPUD1-206ENST00000563343 BST1Q10588 318 aa6.39□□□□□ -1.39
HERPUD1-206ENST00000563343 CASP8Q14790 479 aa6.39□□□□□ -1.39
HERPUD1-206ENST00000563343 LCE2AQ5TA79 106 aaPredicted RBP6.39□□□□□ -1.39
HERPUD1-206ENST00000563343 SLC35E4Q6ICL7 350 aa6.39□□□□□ -1.39
HERPUD1-206ENST00000563343 TMEM53Q6P2H8 277 aa6.39□□□□□ -1.39
HERPUD1-206ENST00000563343 ZNF841Q6ZN19 808 aa6.39□□□□□ -1.39
HERPUD1-206ENST00000563343 PEX5LQ8IYB4 626 aa6.39□□□□□ -1.39
HERPUD1-206ENST00000563343 MUC20Q8N307 709 aaPredicted RBP6.39□□□□□ -1.39
HERPUD1-206ENST00000563343 MIER2Q8N344 545 aa6.39□□□□□ -1.39
HERPUD1-206ENST00000563343 FNDC5Q8NAU1 212 aa6.39□□□□□ -1.39
HERPUD1-206ENST00000563343 OR4K5Q8NGD3 323 aa6.39□□□□□ -1.39
HERPUD1-206ENST00000563343 ITLN1Q8WWA0 313 aa6.39□□□□□ -1.39
HERPUD1-206ENST00000563343 SLC38A4Q969I6 547 aa6.39□□□□□ -1.39
HERPUD1-206ENST00000563343 NEIL1Q96FI4 390 aaPredicted RBP6.39□□□□□ -1.39
HERPUD1-206ENST00000563343 TMEM246Q9BRR3 403 aa6.39□□□□□ -1.39
HERPUD1-206ENST00000563343 SLC35A5Q9BS91 424 aa6.39□□□□□ -1.39
HERPUD1-206ENST00000563343 NANOGQ9H9S0 305 aa6.39□□□□□ -1.39
HERPUD1-206ENST00000563343 C12orf10Q9HB07 376 aa6.39□□□□□ -1.39
HERPUD1-206ENST00000563343 GLTPQ9NZD2 209 aa6.39□□□□□ -1.39
HERPUD1-206ENST00000563343 FBLN5Q9UBX5 448 aa6.39□□□□□ -1.39
HERPUD1-206ENST00000563343 MIOXQ9UGB7 285 aa6.39□□□□□ -1.39
HERPUD1-206ENST00000563343 FOXJ3Q9UPW0 622 aa6.39□□□□□ -1.39
HERPUD1-206ENST00000563343 ZNF443Q9Y2A4 671 aaPredicted RBP6.39□□□□□ -1.39
HERPUD1-206ENST00000563343 TRAV36DV7A0A075B6V5 113 aa6.38□□□□□ -1.39
HERPUD1-206ENST00000563343 IGHV1-69DA0A0B4J2H0 117 aa6.38□□□□□ -1.39
HERPUD1-206ENST00000563343 A0A0U1RQK1 487 aa6.38□□□□□ -1.39
HERPUD1-206ENST00000563343 PRSS51A0A1B0GVH4 220 aa6.38□□□□□ -1.39
HERPUD1-206ENST00000563343 IQCMA0A1B0GVH7 501 aa6.38□□□□□ -1.39
HERPUD1-206ENST00000563343 EXOC1LA0A1B0GW35 172 aa6.38□□□□□ -1.39
HERPUD1-206ENST00000563343 WI2-2373I1.2A0A1W2PRP0 233 aa6.38□□□□□ -1.39
HERPUD1-206ENST00000563343 ZNF726A6NNF4 738 aa6.38□□□□□ -1.39
HERPUD1-206ENST00000563343 ADARB2-AS1A8MUL3 147 aa6.38□□□□□ -1.39
HERPUD1-206ENST00000563343 LRRN3E7EW58 273 aa6.38□□□□□ -1.39
HERPUD1-206ENST00000563343 H3BSA7 217 aa6.38□□□□□ -1.39
HERPUD1-206ENST00000563343 P2RY10O00398 339 aa6.38□□□□□ -1.39
HERPUD1-206ENST00000563343 ZNF205O95201 554 aa6.38□□□□□ -1.39
HERPUD1-206ENST00000563343 FSTL3O95633 263 aa6.38□□□□□ -1.39
HERPUD1-206ENST00000563343 PTHP01270 115 aa6.38□□□□□ -1.39
HERPUD1-206ENST00000563343 IGHV1-69P01742 117 aa6.38□□□□□ -1.39
HERPUD1-206ENST00000563343 CPA3P15088 417 aa6.38□□□□□ -1.39
HERPUD1-206ENST00000563343 NCF2P19878 526 aaPredicted RBP6.38□□□□□ -1.39
HERPUD1-206ENST00000563343 MVDP53602 400 aa6.38□□□□□ -1.39
HERPUD1-206ENST00000563343 PUDPQ08623 228 aa6.38□□□□□ -1.39
HERPUD1-206ENST00000563343 PSG7Q13046 419 aa6.38□□□□□ -1.39
HERPUD1-206ENST00000563343 PCLAFQ15004 111 aa6.38□□□□□ -1.39
HERPUD1-206ENST00000563343 ZNF404Q494X3 552 aa6.38□□□□□ -1.39
HERPUD1-206ENST00000563343 NRN1LQ496H8 165 aa6.38□□□□□ -1.39
HERPUD1-206ENST00000563343 LIN52Q52LA3 116 aa6.38□□□□□ -1.39
HERPUD1-206ENST00000563343 MTX3Q5HYI7 312 aa6.38□□□□□ -1.39
HERPUD1-206ENST00000563343 WDR25Q64LD2 544 aaPredicted RBP6.38□□□□□ -1.39
HERPUD1-206ENST00000563343 DHRS7BQ6IAN0 325 aaPredicted RBP6.38□□□□□ -1.39
HERPUD1-206ENST00000563343 SLC27A4Q6P1M0 643 aa6.38□□□□□ -1.39
HERPUD1-206ENST00000563343 C5orf46Q6UWT4 87 aa6.38□□□□□ -1.39
HERPUD1-206ENST00000563343 Q6ZTK2 550 aa6.38□□□□□ -1.39
HERPUD1-206ENST00000563343 NET1Q7Z628 596 aaPredicted RBP6.38□□□□□ -1.39
HERPUD1-206ENST00000563343 PXKQ7Z7A4 578 aa6.38□□□□□ -1.39
HERPUD1-206ENST00000563343 DPPA2Q7Z7J5 298 aa6.38□□□□□ -1.39
HERPUD1-206ENST00000563343 C10orf107Q8IVU9 208 aa6.38□□□□□ -1.39
HERPUD1-206ENST00000563343 C11orf44Q8N8P7 122 aa6.38□□□□□ -1.39
HERPUD1-206ENST00000563343 SCAIQ8N9R8 606 aa6.38□□□□□ -1.39
HERPUD1-206ENST00000563343 RBM15BQ8NDT2 890 aaKnown RBP6.38□□□□□ -1.39
HERPUD1-206ENST00000563343 OR6S1Q8NH40 331 aa6.38□□□□□ -1.39
HERPUD1-206ENST00000563343 GATAD2BQ8WXI9 593 aa6.38□□□□□ -1.39
HERPUD1-206ENST00000563343 MOGAT1Q96PD6 335 aa6.38□□□□□ -1.39
HERPUD1-206ENST00000563343 B9D2Q9BPU9 175 aa6.38□□□□□ -1.39
HERPUD1-206ENST00000563343 RHOXF2Q9BQY4 288 aa6.38□□□□□ -1.39
HERPUD1-206ENST00000563343 PCGF1Q9BSM1 259 aa6.38□□□□□ -1.39
HERPUD1-206ENST00000563343 SIRPDQ9H106 197 aa6.38□□□□□ -1.39
HERPUD1-206ENST00000563343 RNF121Q9H920 327 aa6.38□□□□□ -1.39
HERPUD1-206ENST00000563343 GCM1Q9NP62 436 aa6.38□□□□□ -1.39
HERPUD1-206ENST00000563343 ASIC5Q9NY37 505 aa6.38□□□□□ -1.39
HERPUD1-206ENST00000563343 MRPL39Q9NYK5 338 aaKnown RBP6.38□□□□□ -1.39
HERPUD1-206ENST00000563343 SIGLEC9Q9Y336 463 aa6.38□□□□□ -1.39
HERPUD1-206ENST00000563343 MEGF11A6BM72 1044 aa6.37□□□□□ -1.39
HERPUD1-206ENST00000563343 ZNF879B4DU55 563 aa6.37□□□□□ -1.39
HERPUD1-206ENST00000563343 PLPP3O14495 311 aa6.37□□□□□ -1.39
HERPUD1-206ENST00000563343 CYB5R3P00387 301 aaPredicted RBP6.37□□□□□ -1.39
HERPUD1-206ENST00000563343 ABHD2P08910 425 aa6.37□□□□□ -1.39
HERPUD1-206ENST00000563343 NR2F1P10589 423 aa6.37□□□□□ -1.39
HERPUD1-206ENST00000563343 NQO1P15559 274 aaKnown RBP6.37□□□□□ -1.39
HERPUD1-206ENST00000563343 TNFRSF1AP19438 455 aa6.37□□□□□ -1.39
HERPUD1-206ENST00000563343 CCNOP22674 350 aa6.37□□□□□ -1.39
HERPUD1-206ENST00000563343 AHCYP23526 432 aa6.37□□□□□ -1.39
HERPUD1-206ENST00000563343 SLC6A2P23975 617 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms