RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 PRSS37A4D1T9 235 aa2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 PSMB11A5LHX3 300 aa2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 M0R3G1 203 aa2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 KMOO15229 486 aa2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 HDAC3O15379 428 aa2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 EMC8O43402 210 aa2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 TRAF3IP2O43734 574 aaPredicted RBP2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 EIF4E2O60573 245 aaKnown RBP2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 NPIPB7O75200 414 aa2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 FCN3O75636 299 aa2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 FLOT1O75955 427 aa2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 ACTL6AO96019 429 aa2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 MBP02144 154 aa2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 IFNW1P05000 195 aa2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 ZNF19P17023 458 aa2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 CMA1P23946 247 aa2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 OR1E1P30953 314 aa2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 OTX1P32242 354 aaPredicted RBP2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 MAS1LP35410 378 aa2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 AQP2P41181 271 aa2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 TFPI2P48307 235 aa2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 MRPL19P49406 292 aaKnown RBP2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 SSR4P51571 173 aa2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 RND2P52198 227 aa2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 NCBP2P52298 156 aaKnown RBP eCLIP2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 FGF8P55075 233 aaPredicted RBP2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 RPS21P63220 83 aaKnown RBP2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 TWF1Q12792 350 aa2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 TMED1Q13445 227 aa2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 GGTLC2Q14390 218 aa2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 PSMD5Q16401 504 aa2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 C6orf89Q6UWU4 347 aa2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 OAFQ86UD1 273 aa2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 ZNF547Q8IVP9 402 aa2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 DCAF4L2Q8NA75 395 aa2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 LRRC75AQ8NAA5 344 aa2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 OR2L5Q8NG80 312 aa2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 OR52K1Q8NGK4 314 aa2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 FRAT1Q92837 279 aaPredicted RBP2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 APH1AQ96BI3 265 aa2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 TMEM101Q96IK0 257 aa2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 SERPINB12Q96P63 405 aa2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 XPO6Q96QU8 1125 aaKnown RBP2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 KCTD14Q9BQ13 255 aaPredicted RBP2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 PIGUQ9H490 435 aa2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 NXF3Q9H4D5 531 aaKnown RBP2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 RGCCQ9H4X1 137 aa2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 FANCEQ9HB96 536 aa2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 EML4Q9HC35 981 aaKnown RBP2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 EXD2Q9NVH0 621 aa2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 XCL2Q9UBD3 114 aa2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 DDX19BQ9UMR2 479 aa2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 TRAPPC4Q9Y296 219 aa2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 CHTOPQ9Y3Y2 248 aaKnown RBP2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 CDH10Q9Y6N8 788 aa2.27□□□□□ -2.05
SHCBP1-202ENST00000563219 ZNF646O15015 1829 aaPredicted RBP2.26□□□□□ -2.05
SHCBP1-202ENST00000563219 PLEKHG2Q9H7P9 1386 aa2.26□□□□□ -2.05
SHCBP1-202ENST00000563219 TRBV9A0A0B4J1U6 114 aa2.26□□□□□ -2.05
SHCBP1-202ENST00000563219 KBTBD11-OT1A0A1B0GTJ5 212 aa2.26□□□□□ -2.05
SHCBP1-202ENST00000563219 GJE1A6NN92 205 aa2.26□□□□□ -2.05
SHCBP1-202ENST00000563219 PLPP1O14494 284 aa2.26□□□□□ -2.05
SHCBP1-202ENST00000563219 NUPL2O15504 423 aaKnown RBP2.26□□□□□ -2.05
SHCBP1-202ENST00000563219 FAM189A1O60320 539 aa2.26□□□□□ -2.05
SHCBP1-202ENST00000563219 FKBP6O75344 327 aa2.26□□□□□ -2.05
SHCBP1-202ENST00000563219 RDH16O75452 317 aa2.26□□□□□ -2.05
SHCBP1-202ENST00000563219 UTS2O95399 124 aa2.26□□□□□ -2.05
SHCBP1-202ENST00000563219 TGM6O95932 706 aa2.26□□□□□ -2.05
SHCBP1-202ENST00000563219 CD160O95971 181 aa2.26□□□□□ -2.05
SHCBP1-202ENST00000563219 CSTAP01040 98 aa2.26□□□□□ -2.05
SHCBP1-202ENST00000563219 HPNP05981 417 aa2.26□□□□□ -2.05
SHCBP1-202ENST00000563219 EIF4EP06730 217 aaKnown RBP2.26□□□□□ -2.05
SHCBP1-202ENST00000563219 GGT1P19440 569 aa2.26□□□□□ -2.05
SHCBP1-202ENST00000563219 AK4P27144 223 aaPredicted RBP2.26□□□□□ -2.05
SHCBP1-202ENST00000563219 HTR1EP28566 365 aa2.26□□□□□ -2.05
SHCBP1-202ENST00000563219 SERPINB5P36952 375 aa2.26□□□□□ -2.05
SHCBP1-202ENST00000563219 NUP62P37198 522 aaPredicted RBP2.26□□□□□ -2.05
SHCBP1-202ENST00000563219 NBL1P41271 181 aa2.26□□□□□ -2.05
SHCBP1-202ENST00000563219 CCR8P51685 355 aa2.26□□□□□ -2.05
SHCBP1-202ENST00000563219 UGT2B15P54855 530 aa2.26□□□□□ -2.05
SHCBP1-202ENST00000563219 PSMD4P55036 377 aaKnown RBP2.26□□□□□ -2.05
SHCBP1-202ENST00000563219 STXBP1P61764 594 aaKnown RBP2.26□□□□□ -2.05
SHCBP1-202ENST00000563219 RPS15AP62244 130 aaKnown RBP2.26□□□□□ -2.05
SHCBP1-202ENST00000563219 ORC2Q13416 577 aaPredicted RBP2.26□□□□□ -2.05
SHCBP1-202ENST00000563219 TRAM2Q15035 370 aa2.26□□□□□ -2.05
SHCBP1-202ENST00000563219 PSG5Q15238 335 aa2.26□□□□□ -2.05
SHCBP1-202ENST00000563219 SF3A2Q15428 464 aaKnown RBP2.26□□□□□ -2.05
SHCBP1-202ENST00000563219 GUCA2BQ16661 112 aa2.26□□□□□ -2.05
SHCBP1-202ENST00000563219 RFX4Q33E94 735 aa2.26□□□□□ -2.05
SHCBP1-202ENST00000563219 PIGGQ5H8A4 983 aa2.26□□□□□ -2.05
SHCBP1-202ENST00000563219 EOGTQ5NDL2 527 aa2.26□□□□□ -2.05
SHCBP1-202ENST00000563219 GPR107Q5VW38 600 aa2.26□□□□□ -2.05
SHCBP1-202ENST00000563219 SPECC1LQ69YQ0 1117 aa2.26□□□□□ -2.05
SHCBP1-202ENST00000563219 TTC23LQ6PF05 361 aa2.26□□□□□ -2.05
SHCBP1-202ENST00000563219 IL34Q6ZMJ4 242 aa2.26□□□□□ -2.05
SHCBP1-202ENST00000563219 ACP7Q6ZNF0 438 aa2.26□□□□□ -2.05
SHCBP1-202ENST00000563219 VTCN1Q7Z7D3 282 aa2.26□□□□□ -2.05
SHCBP1-202ENST00000563219 TRAM1L1Q8N609 369 aa2.26□□□□□ -2.05
SHCBP1-202ENST00000563219 PROKR2Q8NFJ6 384 aa2.26□□□□□ -2.05
SHCBP1-202ENST00000563219 OR4F15Q8NGB8 312 aa2.26□□□□□ -2.05
SHCBP1-202ENST00000563219 OR56A4Q8NGH8 313 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms