RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 ADCK1Q86TW2 530 aa13.67□□□□□ -0.22
USB1-208ENST00000563207 IGFN1Q86VF2 1251 aa13.67□□□□□ -0.22
USB1-208ENST00000563207 C17orf78Q8N4C9 275 aa13.67□□□□□ -0.22
USB1-208ENST00000563207 SAMD8Q96LT4 415 aa13.67□□□□□ -0.22
USB1-208ENST00000563207 ZNF570Q96NI8 536 aa13.67□□□□□ -0.22
USB1-208ENST00000563207 ALKBH3Q96Q83 286 aaPredicted RBP13.67□□□□□ -0.22
USB1-208ENST00000563207 TSPAN32Q96QS1 320 aa13.67□□□□□ -0.22
USB1-208ENST00000563207 RBP7Q96R05 134 aa13.67□□□□□ -0.22
USB1-208ENST00000563207 KCNK17Q96T54 332 aa13.67□□□□□ -0.22
USB1-208ENST00000563207 NIPSNAP1Q9BPW8 284 aa13.67□□□□□ -0.22
USB1-208ENST00000563207 TRAF4Q9BUZ4 470 aaPredicted RBP13.67□□□□□ -0.22
USB1-208ENST00000563207 ULBP2Q9BZM5 246 aa13.67□□□□□ -0.22
USB1-208ENST00000563207 GABARAPL1Q9H0R8 117 aa13.67□□□□□ -0.22
USB1-208ENST00000563207 SMURF2Q9HAU4 748 aa13.67□□□□□ -0.22
USB1-208ENST00000563207 CRLF2Q9HC73 371 aa13.67□□□□□ -0.22
USB1-208ENST00000563207 GPR35Q9HC97 309 aa13.67□□□□□ -0.22
USB1-208ENST00000563207 NGBQ9NPG2 151 aa13.67□□□□□ -0.22
USB1-208ENST00000563207 KIF17Q9P2E2 1029 aa13.67□□□□□ -0.22
USB1-208ENST00000563207 ENOPH1Q9UHY7 261 aa13.67□□□□□ -0.22
USB1-208ENST00000563207 BAIAP2Q9UQB8 552 aa13.67□□□□□ -0.22
USB1-208ENST00000563207 FAM171A2A8MVW0 826 aa13.66□□□□□ -0.22
USB1-208ENST00000563207 ZNF99A8MXY4 864 aaPredicted RBP13.66□□□□□ -0.22
USB1-208ENST00000563207 E7EQL1 145 aa13.66□□□□□ -0.22
USB1-208ENST00000563207 M0R3G1 203 aa13.66□□□□□ -0.22
USB1-208ENST00000563207 LGALS3BPQ08380 585 aa13.66□□□□□ -0.22
USB1-208ENST00000563207 TOP3AQ13472 1001 aaPredicted RBP13.66□□□□□ -0.22
USB1-208ENST00000563207 GABRA6Q16445 453 aa13.66□□□□□ -0.22
USB1-208ENST00000563207 ZNF627Q7L945 461 aa13.66□□□□□ -0.22
USB1-208ENST00000563207 CCDC36Q8IYA8 594 aa13.66□□□□□ -0.22
USB1-208ENST00000563207 PIAS4Q8N2W9 510 aaPredicted RBP13.66□□□□□ -0.22
USB1-208ENST00000563207 WDR31Q8NA23 367 aa13.66□□□□□ -0.22
USB1-208ENST00000563207 NOXO1Q8NFA2 376 aa13.66□□□□□ -0.22
USB1-208ENST00000563207 MAGEE2Q8TD90 523 aaPredicted RBP13.66□□□□□ -0.22
USB1-208ENST00000563207 ERMAPQ96PL5 475 aaPredicted RBP13.66□□□□□ -0.22
USB1-208ENST00000563207 SNX18Q96RF0 628 aa13.66□□□□□ -0.22
USB1-208ENST00000563207 PKP2Q99959 881 aa13.66□□□□□ -0.22
USB1-208ENST00000563207 IFT27Q9BW83 186 aa13.66□□□□□ -0.22
USB1-208ENST00000563207 OBP2BQ9NPH6 170 aa13.66□□□□□ -0.22
USB1-208ENST00000563207 POFUT2Q9Y2G5 429 aa13.66□□□□□ -0.22
USB1-208ENST00000563207 ADAM18Q9Y3Q7 739 aa13.66□□□□□ -0.22
USB1-208ENST00000563207 IER3IP1Q9Y5U9 82 aa13.66□□□□□ -0.22
USB1-208ENST00000563207 SLC25A15Q9Y619 301 aa13.66□□□□□ -0.22
USB1-208ENST00000563207 OSMP13725 252 aa13.65□□□□□ -0.22
USB1-208ENST00000563207 PRKACGP22612 351 aa13.65□□□□□ -0.22
USB1-208ENST00000563207 NOS3P29474 1203 aa13.65□□□□□ -0.22
USB1-208ENST00000563207 CDH11P55287 796 aa13.65□□□□□ -0.22
USB1-208ENST00000563207 RUNX1T1Q06455 604 aa13.65□□□□□ -0.22
USB1-208ENST00000563207 CEACAM16Q2WEN9 425 aa13.65□□□□□ -0.22
USB1-208ENST00000563207 NRN1LQ496H8 165 aa13.65□□□□□ -0.22
USB1-208ENST00000563207 C10orf128Q5T292 105 aa13.65□□□□□ -0.22
USB1-208ENST00000563207 ANKRD16Q6P6B7 361 aa13.65□□□□□ -0.22
USB1-208ENST00000563207 LRFN4Q6PJG9 635 aa13.65□□□□□ -0.22
USB1-208ENST00000563207 KLHL17Q6TDP4 642 aa13.65□□□□□ -0.22
USB1-208ENST00000563207 LINGO2Q7L985 606 aa13.65□□□□□ -0.22
USB1-208ENST00000563207 HS3ST5Q8IZT8 346 aa13.65□□□□□ -0.22
USB1-208ENST00000563207 PQLC1Q8N2U9 271 aa13.65□□□□□ -0.22
USB1-208ENST00000563207 PARP8Q8N3A8 854 aa13.65□□□□□ -0.22
USB1-208ENST00000563207 OR2T33Q8NG76 320 aa13.65□□□□□ -0.22
USB1-208ENST00000563207 TEX47Q8TBZ9 253 aa13.65□□□□□ -0.22
USB1-208ENST00000563207 HDAC2Q92769 488 aaKnown RBP13.65□□□□□ -0.22
USB1-208ENST00000563207 MUCL1Q96DR8 90 aa13.65□□□□□ -0.22
USB1-208ENST00000563207 Q96M85 177 aa13.65□□□□□ -0.22
USB1-208ENST00000563207 SEMA6AQ9H2E6 1030 aa13.65□□□□□ -0.22
USB1-208ENST00000563207 EGLN3Q9H6Z9 239 aa13.65□□□□□ -0.22
USB1-208ENST00000563207 MOV10Q9HCE1 1003 aaKnown RBP13.65□□□□□ -0.22
USB1-208ENST00000563207 PAPOLBQ9NRJ5 636 aaKnown RBP13.65□□□□□ -0.22
USB1-208ENST00000563207 TBC1D23Q9NUY8 699 aa13.65□□□□□ -0.22
USB1-208ENST00000563207 REV1Q9UBZ9 1251 aa13.65□□□□□ -0.22
USB1-208ENST00000563207 IL20RAQ9UHF4 553 aa13.65□□□□□ -0.22
USB1-208ENST00000563207 OAZ3Q9UMX2 235 aa13.65□□□□□ -0.22
USB1-208ENST00000563207 CUBNO60494 3623 aa13.64□□□□□ -0.23
USB1-208ENST00000563207 TEX13CA0A0J9YWL9 993 aa13.64□□□□□ -0.23
USB1-208ENST00000563207 PRSS37A4D1T9 235 aa13.64□□□□□ -0.23
USB1-208ENST00000563207 ANKRD65E5RJM6 399 aa13.64□□□□□ -0.23
USB1-208ENST00000563207 H3BN98 237 aa13.64□□□□□ -0.23
USB1-208ENST00000563207 M0R1B8 84 aa13.64□□□□□ -0.23
USB1-208ENST00000563207 BHLHE40O14503 412 aa13.64□□□□□ -0.23
USB1-208ENST00000563207 DHHO43323 396 aa13.64□□□□□ -0.23
USB1-208ENST00000563207 PPP1R3DO95685 299 aa13.64□□□□□ -0.23
USB1-208ENST00000563207 TP53P04637 393 aaPredicted RBP13.64□□□□□ -0.23
USB1-208ENST00000563207 QDPRP09417 244 aa13.64□□□□□ -0.23
USB1-208ENST00000563207 DAPP51397 102 aa13.64□□□□□ -0.23
USB1-208ENST00000563207 ZNF84P51523 738 aa13.64□□□□□ -0.23
USB1-208ENST00000563207 ESRRGP62508 458 aa13.64□□□□□ -0.23
USB1-208ENST00000563207 CD47Q08722 323 aa13.64□□□□□ -0.23
USB1-208ENST00000563207 KRR1Q13601 381 aaKnown RBP13.64□□□□□ -0.23
USB1-208ENST00000563207 PHYHD1Q5SRE7 291 aa13.64□□□□□ -0.23
USB1-208ENST00000563207 KDM4DQ6B0I6 523 aa13.64□□□□□ -0.23
USB1-208ENST00000563207 DNM1P46Q6ZS02 220 aa13.64□□□□□ -0.23
USB1-208ENST00000563207 WDFY1Q8IWB7 410 aa13.64□□□□□ -0.23
USB1-208ENST00000563207 LNX2Q8N448 690 aa13.64□□□□□ -0.23
USB1-208ENST00000563207 SYT14Q8NB59 555 aa13.64□□□□□ -0.23
USB1-208ENST00000563207 ICA1LQ8NDH6 482 aa13.64□□□□□ -0.23
USB1-208ENST00000563207 OR1K1Q8NGR3 316 aa13.64□□□□□ -0.23
USB1-208ENST00000563207 MCHR2Q969V1 340 aa13.64□□□□□ -0.23
USB1-208ENST00000563207 NMD3Q96D46 503 aaKnown RBP13.64□□□□□ -0.23
USB1-208ENST00000563207 RBM4BQ9BQ04 359 aaKnown RBP13.64□□□□□ -0.23
USB1-208ENST00000563207 RBM4Q9BWF3 364 aaKnown RBP13.64□□□□□ -0.23
USB1-208ENST00000563207 TSSK6Q9BXA6 273 aa13.64□□□□□ -0.23
USB1-208ENST00000563207 TEX12Q9BXU0 123 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms