RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 DUSP7Q16829 419 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 ZNF630Q2M218 657 aaPredicted RBP4.01□□□□□ -1.77
SMG1-206ENST00000562668 CTU2Q2VPK5 515 aaKnown RBP4.01□□□□□ -1.77
SMG1-206ENST00000562668 PLPPR5Q32ZL2 321 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 GLYR1Q49A26 553 aaPredicted RBP4.01□□□□□ -1.77
SMG1-206ENST00000562668 GPAT3Q53EU6 434 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 KRTCAP3Q53RY4 240 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 MRPL2Q5T653 305 aaKnown RBP4.01□□□□□ -1.77
SMG1-206ENST00000562668 ATAD3BQ5T9A4 648 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 SERTAD4-AS1Q5TG53 156 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 REEP3Q6NUK4 255 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 DHRS4L2Q6PKH6 230 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 GFRALQ6UXV0 394 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 TRPM8Q7Z2W7 1104 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 TSEN54Q7Z6J9 526 aaKnown RBP4.01□□□□□ -1.77
SMG1-206ENST00000562668 YRDCQ86U90 279 aaKnown RBP4.01□□□□□ -1.77
SMG1-206ENST00000562668 SLC22A16Q86VW1 577 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 DOLPP1Q86YN1 238 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 LACC1Q8IV20 430 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 MISPQ8IVT2 679 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 GTPBP8Q8N3Z3 284 aaPredicted RBP4.01□□□□□ -1.77
SMG1-206ENST00000562668 RPRMLQ8N4K4 120 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 MARVELD2Q8N4S9 558 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 PCYOX1LQ8NBM8 494 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 RBM15BQ8NDT2 890 aaKnown RBP4.01□□□□□ -1.77
SMG1-206ENST00000562668 DMBX1Q8NFW5 382 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 OR5M1Q8NGP8 315 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 OR52P1PQ8NH57 321 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 NEIL3Q8TAT5 605 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 PHF10Q8WUB8 498 aaKnown RBP4.01□□□□□ -1.77
SMG1-206ENST00000562668 SLC35B4Q969S0 331 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 CMTM5Q96DZ9 223 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 ARHGDIGQ99819 225 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 HOPXQ9BPY8 73 aaPredicted RBP4.01□□□□□ -1.77
SMG1-206ENST00000562668 THUMPD3Q9BV44 507 aaKnown RBP4.01□□□□□ -1.77
SMG1-206ENST00000562668 UGT2B28Q9BY64 529 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 TBL1XR1Q9BZK7 514 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 LAT2Q9GZY6 243 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 SDHAF3Q9NRP4 125 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 AGPAT4Q9NRZ5 378 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 MED17Q9NVC6 651 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 GID8Q9NWU2 228 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 TAS2R1Q9NYW7 299 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 CALML5Q9NZT1 146 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 SEC14L3Q9UDX4 400 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 POU2F3Q9UKI9 436 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 ZNF443Q9Y2A4 671 aaPredicted RBP4.01□□□□□ -1.77
SMG1-206ENST00000562668 SLC6A5Q9Y345 797 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 ZNF337Q9Y3M9 751 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 FAM215AQ9Y5M1 114 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 FLNCQ14315 2725 aa4.01□□□□□ -1.77
SMG1-206ENST00000562668 PRRC2CQ9Y520 2896 aaKnown RBP4□□□□□ -1.77
SMG1-206ENST00000562668 PHF3Q92576 2039 aaKnown RBP4□□□□□ -1.77
SMG1-206ENST00000562668 MED12Q93074 2177 aa4□□□□□ -1.77
SMG1-206ENST00000562668 GTF3C1Q12789 2109 aa4□□□□□ -1.77
SMG1-206ENST00000562668 SPTA1P02549 2419 aa4□□□□□ -1.77
SMG1-206ENST00000562668 A0A087WZY1 265 aa4□□□□□ -1.77
SMG1-206ENST00000562668 TNFSF12-TNFSF13A0A0A6YY99 330 aa4□□□□□ -1.77
SMG1-206ENST00000562668 C15orf38-AP3S2A0A0A6YYH1 394 aa4□□□□□ -1.77
SMG1-206ENST00000562668 TRGV5A0A0B4J1U4 118 aa4□□□□□ -1.77
SMG1-206ENST00000562668 KRTAP9-6A8MVA2 160 aa4□□□□□ -1.77
SMG1-206ENST00000562668 H0YC42 278 aa4□□□□□ -1.77
SMG1-206ENST00000562668 M0QX08 132 aa4□□□□□ -1.77
SMG1-206ENST00000562668 TFECO14948 347 aaPredicted RBP4□□□□□ -1.77
SMG1-206ENST00000562668 HCRTR2O43614 444 aa4□□□□□ -1.77
SMG1-206ENST00000562668 SLC19A2O60779 497 aa4□□□□□ -1.77
SMG1-206ENST00000562668 PEX14O75381 377 aa4□□□□□ -1.77
SMG1-206ENST00000562668 PDE9AO76083 593 aa4□□□□□ -1.77
SMG1-206ENST00000562668 TOXO94900 526 aa4□□□□□ -1.77
SMG1-206ENST00000562668 LGI1O95970 557 aa4□□□□□ -1.77
SMG1-206ENST00000562668 ACTL6AO96019 429 aa4□□□□□ -1.77
SMG1-206ENST00000562668 CSTAP01040 98 aa4□□□□□ -1.77
SMG1-206ENST00000562668 OPN1SWP03999 348 aa4□□□□□ -1.77
SMG1-206ENST00000562668 SEMG1P04279 462 aa4□□□□□ -1.77
SMG1-206ENST00000562668 UBTFL6P0CB48 400 aaPredicted RBP4□□□□□ -1.77
SMG1-206ENST00000562668 GKN3PP0CG01 181 aa4□□□□□ -1.77
SMG1-206ENST00000562668 UBL4AP11441 157 aa4□□□□□ -1.77
SMG1-206ENST00000562668 HSD17B1P14061 328 aa4□□□□□ -1.77
SMG1-206ENST00000562668 CPN1P15169 458 aa4□□□□□ -1.77
SMG1-206ENST00000562668 ZNF708P17019 499 aa4□□□□□ -1.77
SMG1-206ENST00000562668 ZNF17P17021 662 aa4□□□□□ -1.77
SMG1-206ENST00000562668 GGT1P19440 569 aa4□□□□□ -1.77
SMG1-206ENST00000562668 EDN2P20800 178 aa4□□□□□ -1.77
SMG1-206ENST00000562668 ATP6V1C1P21283 382 aa4□□□□□ -1.77
SMG1-206ENST00000562668 CALB2P22676 271 aa4□□□□□ -1.77
SMG1-206ENST00000562668 CHMP24386 653 aa4□□□□□ -1.77
SMG1-206ENST00000562668 HTR2AP28223 471 aa4□□□□□ -1.77
SMG1-206ENST00000562668 SHC1P29353 583 aa4□□□□□ -1.77
SMG1-206ENST00000562668 AQP1P29972 269 aa4□□□□□ -1.77
SMG1-206ENST00000562668 CA7P43166 264 aa4□□□□□ -1.77
SMG1-206ENST00000562668 STARP49675 285 aa4□□□□□ -1.77
SMG1-206ENST00000562668 SUCLG1P53597 346 aaKnown RBP4□□□□□ -1.77
SMG1-206ENST00000562668 TPD52P55327 224 aaPredicted RBP4□□□□□ -1.77
SMG1-206ENST00000562668 CLDN20P56880 219 aa4□□□□□ -1.77
SMG1-206ENST00000562668 PLGLB1Q02325 96 aa4□□□□□ -1.77
SMG1-206ENST00000562668 EPS8Q12929 822 aa4□□□□□ -1.77
SMG1-206ENST00000562668 FOXF1Q12946 379 aa4□□□□□ -1.77
SMG1-206ENST00000562668 BNIP1Q12981 228 aa4□□□□□ -1.77
SMG1-206ENST00000562668 GANABQ14697 944 aaKnown RBP4□□□□□ -1.77
SMG1-206ENST00000562668 SLC10A1Q14973 349 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms