RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 TMEM185AQ8NFB2 350 aa12.64□□□□□ -0.39
VPS9D1-202ENST00000561976 C1orf198Q9H425 327 aa12.64□□□□□ -0.39
VPS9D1-202ENST00000561976 ZMAT3Q9HA38 289 aaKnown RBP12.64□□□□□ -0.39
VPS9D1-202ENST00000561976 MYEF2Q9P2K5 600 aaKnown RBP12.64□□□□□ -0.39
VPS9D1-202ENST00000561976 ARHGEF17Q96PE2 2063 aaPredicted RBP12.64□□□□□ -0.39
VPS9D1-202ENST00000561976 OIP5O43482 229 aa12.64□□□□□ -0.39
VPS9D1-202ENST00000561976 FOXS1O43638 330 aa12.64□□□□□ -0.39
VPS9D1-202ENST00000561976 LIPCP11150 499 aa12.64□□□□□ -0.39
VPS9D1-202ENST00000561976 CD34P28906 385 aa12.64□□□□□ -0.39
VPS9D1-202ENST00000561976 BTG2P78543 158 aa12.64□□□□□ -0.39
VPS9D1-202ENST00000561976 DMWDQ09019 674 aa12.64□□□□□ -0.39
VPS9D1-202ENST00000561976 CD226Q15762 336 aa12.64□□□□□ -0.39
VPS9D1-202ENST00000561976 GLT8D1Q68CQ7 371 aa12.64□□□□□ -0.39
VPS9D1-202ENST00000561976 POMZP3Q6PJE2 187 aa12.64□□□□□ -0.39
VPS9D1-202ENST00000561976 ATG4DQ86TL0 474 aaPredicted RBP12.64□□□□□ -0.39
VPS9D1-202ENST00000561976 SFTPA2Q8IWL1 248 aa12.64□□□□□ -0.39
VPS9D1-202ENST00000561976 ZNF563Q8TA94 476 aa12.64□□□□□ -0.39
VPS9D1-202ENST00000561976 PPP1R14AQ96A00 147 aa12.64□□□□□ -0.39
VPS9D1-202ENST00000561976 SEH1LQ96EE3 360 aa12.64□□□□□ -0.39
VPS9D1-202ENST00000561976 KTI12Q96EK9 354 aaPredicted RBP12.64□□□□□ -0.39
VPS9D1-202ENST00000561976 SEC22AQ96IW7 307 aa12.64□□□□□ -0.39
VPS9D1-202ENST00000561976 ZNF75AQ96N20 296 aa12.64□□□□□ -0.39
VPS9D1-202ENST00000561976 VRK1Q99986 396 aaPredicted RBP12.64□□□□□ -0.39
VPS9D1-202ENST00000561976 KXD1Q9BQD3 176 aa12.64□□□□□ -0.39
VPS9D1-202ENST00000561976 SLC25A21Q9BQT8 299 aaPredicted RBP12.64□□□□□ -0.39
VPS9D1-202ENST00000561976 PTDSS2Q9BVG9 487 aa12.64□□□□□ -0.39
VPS9D1-202ENST00000561976 NKX6-2Q9C056 277 aaPredicted RBP12.64□□□□□ -0.39
VPS9D1-202ENST00000561976 SAV1Q9H4B6 383 aaPredicted RBP12.64□□□□□ -0.39
VPS9D1-202ENST00000561976 YBX2Q9Y2T7 364 aaKnown RBP12.64□□□□□ -0.39
VPS9D1-202ENST00000561976 LINC01553A4QN01 128 aa12.63□□□□□ -0.39
VPS9D1-202ENST00000561976 CCSO14618 274 aa12.63□□□□□ -0.39
VPS9D1-202ENST00000561976 APBB3O95704 486 aa12.63□□□□□ -0.39
VPS9D1-202ENST00000561976 CYB5AP00167 134 aa12.63□□□□□ -0.39
VPS9D1-202ENST00000561976 GDI1P31150 447 aa12.63□□□□□ -0.39
VPS9D1-202ENST00000561976 SSBP1Q04837 148 aaKnown RBP12.63□□□□□ -0.39
VPS9D1-202ENST00000561976 CBLN3Q6UW01 205 aa12.63□□□□□ -0.39
VPS9D1-202ENST00000561976 OR1J4Q8NGS1 313 aa12.63□□□□□ -0.39
VPS9D1-202ENST00000561976 MNTQ99583 582 aa12.63□□□□□ -0.39
VPS9D1-202ENST00000561976 DNTTIP1Q9H147 329 aa12.63□□□□□ -0.39
VPS9D1-202ENST00000561976 WDR13Q9H1Z4 485 aa12.63□□□□□ -0.39
VPS9D1-202ENST00000561976 OR10A5Q9H207 317 aa12.63□□□□□ -0.39
VPS9D1-202ENST00000561976 FAM60AQ9NP50 221 aa12.63□□□□□ -0.39
VPS9D1-202ENST00000561976 PRTFDC1Q9NRG1 225 aa12.63□□□□□ -0.39
VPS9D1-202ENST00000561976 HPF1Q9NWY4 346 aa12.63□□□□□ -0.39
VPS9D1-202ENST00000561976 CPNE7Q9UBL6 633 aa12.63□□□□□ -0.39
VPS9D1-202ENST00000561976 ZMAT5Q9UDW3 170 aaKnown RBP12.63□□□□□ -0.39
VPS9D1-202ENST00000561976 DHDHQ9UQ10 334 aa12.63□□□□□ -0.39
VPS9D1-202ENST00000561976 C11orf98E9PRG8 122 aa12.63□□□□□ -0.39
VPS9D1-202ENST00000561976 POU2F2P09086 479 aa12.63□□□□□ -0.39
VPS9D1-202ENST00000561976 ASAH2BP0C7U1 165 aa12.63□□□□□ -0.39
VPS9D1-202ENST00000561976 RNH1P13489 461 aaKnown RBP12.63□□□□□ -0.39
VPS9D1-202ENST00000561976 CNR1P21554 472 aa12.63□□□□□ -0.39
VPS9D1-202ENST00000561976 PDSS1Q5T2R2 415 aa12.63□□□□□ -0.39
VPS9D1-202ENST00000561976 PARGQ86W56 976 aa12.63□□□□□ -0.39
VPS9D1-202ENST00000561976 KCNRGQ8N5I3 272 aa12.63□□□□□ -0.39
VPS9D1-202ENST00000561976 TMEM229BQ8NBD8 167 aa12.63□□□□□ -0.39
VPS9D1-202ENST00000561976 THRSPQ92748 146 aa12.63□□□□□ -0.39
VPS9D1-202ENST00000561976 OBP2AQ9NY56 170 aa12.63□□□□□ -0.39
VPS9D1-202ENST00000561976 CKLFQ9UBR5 152 aa12.63□□□□□ -0.39
VPS9D1-202ENST00000561976 MRPS33Q9Y291 106 aaKnown RBP12.63□□□□□ -0.39
VPS9D1-202ENST00000561976 FAM25EA8MYX2 175 aa12.62□□□□□ -0.39
VPS9D1-202ENST00000561976 ZNF736B4DX44 427 aaPredicted RBP12.62□□□□□ -0.39
VPS9D1-202ENST00000561976 PHYHO14832 338 aa12.62□□□□□ -0.39
VPS9D1-202ENST00000561976 NDUFA2O43678 99 aa12.62□□□□□ -0.39
VPS9D1-202ENST00000561976 EIF4E2O60573 245 aaKnown RBP12.62□□□□□ -0.39
VPS9D1-202ENST00000561976 ALOX12BO75342 701 aa12.62□□□□□ -0.39
VPS9D1-202ENST00000561976 OR6A2O95222 327 aa12.62□□□□□ -0.39
VPS9D1-202ENST00000561976 TXNDC12O95881 172 aa12.62□□□□□ -0.39
VPS9D1-202ENST00000561976 HLA-AP01891 365 aaKnown RBP12.62□□□□□ -0.39
VPS9D1-202ENST00000561976 EGR4Q05215 589 aa12.62□□□□□ -0.39
VPS9D1-202ENST00000561976 DHRS2Q13268 280 aa12.62□□□□□ -0.39
VPS9D1-202ENST00000561976 NR0B2Q15466 257 aa12.62□□□□□ -0.39
VPS9D1-202ENST00000561976 KLHL26Q53HC5 615 aa12.62□□□□□ -0.39
VPS9D1-202ENST00000561976 EMC4Q5J8M3 183 aa12.62□□□□□ -0.39
VPS9D1-202ENST00000561976 GLYATL3Q5SZD4 288 aa12.62□□□□□ -0.39
VPS9D1-202ENST00000561976 ATPAF1Q5TC12 328 aaPredicted RBP12.62□□□□□ -0.39
VPS9D1-202ENST00000561976 EEF1A1P5Q5VTE0 462 aa12.62□□□□□ -0.39
VPS9D1-202ENST00000561976 JMJD6Q6NYC1 403 aaPredicted RBP12.62□□□□□ -0.39
VPS9D1-202ENST00000561976 BPIFB2Q8N4F0 458 aa12.62□□□□□ -0.39
VPS9D1-202ENST00000561976 OR5M8Q8NGP6 311 aa12.62□□□□□ -0.39
VPS9D1-202ENST00000561976 OTOSQ8NHW6 89 aa12.62□□□□□ -0.39
VPS9D1-202ENST00000561976 BMFQ96LC9 184 aa12.62□□□□□ -0.39
VPS9D1-202ENST00000561976 SFXN1Q9H9B4 322 aa12.62□□□□□ -0.39
VPS9D1-202ENST00000561976 SLC17A5Q9NRA2 495 aa12.62□□□□□ -0.39
VPS9D1-202ENST00000561976 GDE1Q9NZC3 331 aa12.62□□□□□ -0.39
VPS9D1-202ENST00000561976 LOC100509620A0A075B734 347 aa12.62□□□□□ -0.39
VPS9D1-202ENST00000561976 XKRYO14609 159 aa12.62□□□□□ -0.39
VPS9D1-202ENST00000561976 ZNF28P17035 718 aa12.62□□□□□ -0.39
VPS9D1-202ENST00000561976 MAOAP21397 527 aa12.62□□□□□ -0.39
VPS9D1-202ENST00000561976 HTR2CP28335 458 aa12.62□□□□□ -0.39
VPS9D1-202ENST00000561976 DLSTP36957 453 aa12.62□□□□□ -0.39
VPS9D1-202ENST00000561976 NKPD1Q17RQ9 610 aa12.62□□□□□ -0.39
VPS9D1-202ENST00000561976 TMEM196Q5HYL7 178 aa12.62□□□□□ -0.39
VPS9D1-202ENST00000561976 C11orf87Q6NUJ2 197 aa12.62□□□□□ -0.39
VPS9D1-202ENST00000561976 MOB3CQ70IA8 216 aa12.62□□□□□ -0.39
VPS9D1-202ENST00000561976 MED25Q71SY5 747 aa12.62□□□□□ -0.39
VPS9D1-202ENST00000561976 NDUFAF7Q7L592 441 aa12.62□□□□□ -0.39
VPS9D1-202ENST00000561976 CCDC36Q8IYA8 594 aa12.62□□□□□ -0.39
VPS9D1-202ENST00000561976 SLC25A28Q96A46 364 aa12.62□□□□□ -0.39
VPS9D1-202ENST00000561976 ZBTB8AQ96BR9 441 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms