RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 TEX13CA0A0J9YWL9 993 aa11.22□□□□□ -0.61
CTDSPL2-209ENST00000560620 ERCC1P07992 297 aaPredicted RBP11.22□□□□□ -0.61
CTDSPL2-209ENST00000560620 T-ENOLP0DO92 83 aa11.22□□□□□ -0.61
CTDSPL2-209ENST00000560620 CCL2P13500 99 aa11.22□□□□□ -0.61
CTDSPL2-209ENST00000560620 ACANP16112 2415 aa11.22□□□□□ -0.61
CTDSPL2-209ENST00000560620 CCNOP22674 350 aa11.22□□□□□ -0.61
CTDSPL2-209ENST00000560620 NR4A1P22736 598 aa11.22□□□□□ -0.61
CTDSPL2-209ENST00000560620 APLNRP35414 380 aa11.22□□□□□ -0.61
CTDSPL2-209ENST00000560620 IFNGR2P38484 337 aa11.22□□□□□ -0.61
CTDSPL2-209ENST00000560620 OMPP47874 163 aa11.22□□□□□ -0.61
CTDSPL2-209ENST00000560620 MRPS34P82930 218 aaKnown RBP11.22□□□□□ -0.61
CTDSPL2-209ENST00000560620 FHL1Q13642 323 aa11.22□□□□□ -0.61
CTDSPL2-209ENST00000560620 TRIM25Q14258 630 aaKnown RBP11.22□□□□□ -0.61
CTDSPL2-209ENST00000560620 CARTPTQ16568 116 aa11.22□□□□□ -0.61
CTDSPL2-209ENST00000560620 SWI5Q1ZZU3 235 aa11.22□□□□□ -0.61
CTDSPL2-209ENST00000560620 TBC1D28Q2M2D7 210 aa11.22□□□□□ -0.61
CTDSPL2-209ENST00000560620 NRN1LQ496H8 165 aa11.22□□□□□ -0.61
CTDSPL2-209ENST00000560620 MTX3Q5HYI7 312 aa11.22□□□□□ -0.61
CTDSPL2-209ENST00000560620 SVOPLQ8N434 492 aa11.22□□□□□ -0.61
CTDSPL2-209ENST00000560620 MAPK1IP1LQ8NDC0 245 aa11.22□□□□□ -0.61
CTDSPL2-209ENST00000560620 ICA1LQ8NDH6 482 aa11.22□□□□□ -0.61
CTDSPL2-209ENST00000560620 ZNF519Q8TB69 540 aa11.22□□□□□ -0.61
CTDSPL2-209ENST00000560620 FANK1Q8TC84 345 aa11.22□□□□□ -0.61
CTDSPL2-209ENST00000560620 DHRS1Q96LJ7 313 aa11.22□□□□□ -0.61
CTDSPL2-209ENST00000560620 Q96M85 177 aa11.22□□□□□ -0.61
CTDSPL2-209ENST00000560620 THTPAQ9BU02 230 aa11.22□□□□□ -0.61
CTDSPL2-209ENST00000560620 LRMDAQ9H2I8 198 aa11.22□□□□□ -0.61
CTDSPL2-209ENST00000560620 OR51B6Q9H340 312 aa11.22□□□□□ -0.61
CTDSPL2-209ENST00000560620 MUC13Q9H3R2 512 aa11.22□□□□□ -0.61
CTDSPL2-209ENST00000560620 C1orf198Q9H425 327 aa11.22□□□□□ -0.61
CTDSPL2-209ENST00000560620 ZNF442Q9H7R0 627 aa11.22□□□□□ -0.61
CTDSPL2-209ENST00000560620 SIGLEC7Q9Y286 467 aa11.22□□□□□ -0.61
CTDSPL2-209ENST00000560620 CMAHPQ9Y471 501 aa11.22□□□□□ -0.61
CTDSPL2-209ENST00000560620 IER3IP1Q9Y5U9 82 aa11.22□□□□□ -0.61
CTDSPL2-209ENST00000560620 ZNF469Q96JG9 3925 aaPredicted RBP11.21□□□□□ -0.61
CTDSPL2-209ENST00000560620 TNFRSF11BO00300 401 aa11.21□□□□□ -0.61
CTDSPL2-209ENST00000560620 SOCS2O14508 198 aa11.21□□□□□ -0.61
CTDSPL2-209ENST00000560620 GYG2O15488 501 aa11.21□□□□□ -0.61
CTDSPL2-209ENST00000560620 GPRIN2O60269 458 aa11.21□□□□□ -0.61
CTDSPL2-209ENST00000560620 MGRN1O60291 552 aa11.21□□□□□ -0.61
CTDSPL2-209ENST00000560620 LY6HO94772 140 aa11.21□□□□□ -0.61
CTDSPL2-209ENST00000560620 FAM157BP0CG42 384 aa11.21□□□□□ -0.61
CTDSPL2-209ENST00000560620 ZNF35P13682 527 aa11.21□□□□□ -0.61
CTDSPL2-209ENST00000560620 ZNF26P17031 533 aaPredicted RBP11.21□□□□□ -0.61
CTDSPL2-209ENST00000560620 NOS3P29474 1203 aa11.21□□□□□ -0.61
CTDSPL2-209ENST00000560620 SDHAP31040 664 aa11.21□□□□□ -0.61
CTDSPL2-209ENST00000560620 LIMS1P48059 325 aa11.21□□□□□ -0.61
CTDSPL2-209ENST00000560620 RPS6KA3P51812 740 aa11.21□□□□□ -0.61
CTDSPL2-209ENST00000560620 ZNF133P52736 654 aaPredicted RBP11.21□□□□□ -0.61
CTDSPL2-209ENST00000560620 EFNA4P52798 201 aa11.21□□□□□ -0.61
CTDSPL2-209ENST00000560620 RIPPLY3P57055 190 aa11.21□□□□□ -0.61
CTDSPL2-209ENST00000560620 RPS23P62266 143 aaKnown RBP11.21□□□□□ -0.61
CTDSPL2-209ENST00000560620 KRR1Q13601 381 aaKnown RBP11.21□□□□□ -0.61
CTDSPL2-209ENST00000560620 MST1LQ2TV78 715 aa11.21□□□□□ -0.61
CTDSPL2-209ENST00000560620 IQCCQ4KMZ1 466 aa11.21□□□□□ -0.61
CTDSPL2-209ENST00000560620 FAM98BQ52LJ0 330 aaKnown RBP11.21□□□□□ -0.61
CTDSPL2-209ENST00000560620 SLC25A47Q6Q0C1 308 aa11.21□□□□□ -0.61
CTDSPL2-209ENST00000560620 SMARCD3Q6STE5 483 aa11.21□□□□□ -0.61
CTDSPL2-209ENST00000560620 ZNF525Q8N782 197 aa11.21□□□□□ -0.61
CTDSPL2-209ENST00000560620 OR1J2Q8NGS2 313 aa11.21□□□□□ -0.61
CTDSPL2-209ENST00000560620 FAM168AQ92567 244 aa11.21□□□□□ -0.61
CTDSPL2-209ENST00000560620 RASD2Q96D21 266 aa11.21□□□□□ -0.61
CTDSPL2-209ENST00000560620 CLPTM1LQ96KA5 538 aa11.21□□□□□ -0.61
CTDSPL2-209ENST00000560620 ZNF75AQ96N20 296 aa11.21□□□□□ -0.61
CTDSPL2-209ENST00000560620 REG4Q9BYZ8 158 aa11.21□□□□□ -0.61
CTDSPL2-209ENST00000560620 C1orf21Q9H246 121 aa11.21□□□□□ -0.61
CTDSPL2-209ENST00000560620 TAS2R1Q9NYW7 299 aa11.21□□□□□ -0.61
CTDSPL2-209ENST00000560620 SLC7A8Q9UHI5 535 aa11.21□□□□□ -0.61
CTDSPL2-209ENST00000560620 DUSP13Q9UII6 198 aa11.21□□□□□ -0.61
CTDSPL2-209ENST00000560620 FZR1Q9UM11 496 aa11.21□□□□□ -0.61
CTDSPL2-209ENST00000560620 UGT2A1Q9Y4X1 527 aa11.21□□□□□ -0.61
CTDSPL2-209ENST00000560620 PRSS37A4D1T9 235 aa11.2□□□□□ -0.62
CTDSPL2-209ENST00000560620 PTP4A3O75365 173 aa11.2□□□□□ -0.62
CTDSPL2-209ENST00000560620 KRT36O76013 467 aa11.2□□□□□ -0.62
CTDSPL2-209ENST00000560620 UBOX5O94941 541 aa11.2□□□□□ -0.62
CTDSPL2-209ENST00000560620 LY6G6DO95868 133 aa11.2□□□□□ -0.62
CTDSPL2-209ENST00000560620 F12P00748 615 aaPredicted RBP11.2□□□□□ -0.62
CTDSPL2-209ENST00000560620 LCKP06239 509 aa11.2□□□□□ -0.62
CTDSPL2-209ENST00000560620 ZNF32P17041 273 aa11.2□□□□□ -0.62
CTDSPL2-209ENST00000560620 APEX1P27695 318 aaKnown RBP11.2□□□□□ -0.62
CTDSPL2-209ENST00000560620 LAP3P28838 519 aa11.2□□□□□ -0.62
CTDSPL2-209ENST00000560620 CENPAP49450 140 aa11.2□□□□□ -0.62
CTDSPL2-209ENST00000560620 DSCR9P59020 149 aa11.2□□□□□ -0.62
CTDSPL2-209ENST00000560620 PCBD1P61457 104 aa11.2□□□□□ -0.62
CTDSPL2-209ENST00000560620 EFNB3Q15768 340 aa11.2□□□□□ -0.62
CTDSPL2-209ENST00000560620 MESTQ5EB52 335 aa11.2□□□□□ -0.62
CTDSPL2-209ENST00000560620 PABPC1L2AQ5JQF8 200 aa11.2□□□□□ -0.62
CTDSPL2-209ENST00000560620 GPR139Q6DWJ6 353 aa11.2□□□□□ -0.62
CTDSPL2-209ENST00000560620 LCN8Q6JVE9 175 aa11.2□□□□□ -0.62
CTDSPL2-209ENST00000560620 THSD4Q6ZMP0 1018 aa11.2□□□□□ -0.62
CTDSPL2-209ENST00000560620 DPY19L2P2Q6ZN68 376 aa11.2□□□□□ -0.62
CTDSPL2-209ENST00000560620 ZER1Q7Z7L7 766 aa11.2□□□□□ -0.62
CTDSPL2-209ENST00000560620 JAZF1Q86VZ6 243 aa11.2□□□□□ -0.62
CTDSPL2-209ENST00000560620 ZNF584Q8IVC4 421 aa11.2□□□□□ -0.62
CTDSPL2-209ENST00000560620 ALDH16A1Q8IZ83 802 aa11.2□□□□□ -0.62
CTDSPL2-209ENST00000560620 GNPDA2Q8TDQ7 276 aa11.2□□□□□ -0.62
CTDSPL2-209ENST00000560620 NABP1Q96AH0 204 aa11.2□□□□□ -0.62
CTDSPL2-209ENST00000560620 NMD3Q96D46 503 aaKnown RBP11.2□□□□□ -0.62
CTDSPL2-209ENST00000560620 ASB9Q96DX5 294 aa11.2□□□□□ -0.62
CTDSPL2-209ENST00000560620 FOXN4Q96NZ1 517 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms