RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 ROPN1BQ9BZX4 212 aaPredicted RBP16.63■□□□□ 0.25
RABGGTA-214ENST00000560163 WDR55Q9H6Y2 383 aaPredicted RBP16.63■□□□□ 0.25
RABGGTA-214ENST00000560163 ROPN1Q9HAT0 212 aaPredicted RBP16.63■□□□□ 0.25
RABGGTA-214ENST00000560163 ZNF446Q9NWS9 450 aa16.63■□□□□ 0.25
RABGGTA-214ENST00000560163 ZDHHC8Q9ULC8 765 aa16.63■□□□□ 0.25
RABGGTA-214ENST00000560163 TRIM33Q9UPN9 1127 aa16.63■□□□□ 0.25
RABGGTA-214ENST00000560163 PLSCR5A0PG75 271 aa16.62■□□□□ 0.25
RABGGTA-214ENST00000560163 SLC22A3O75751 556 aa16.62■□□□□ 0.25
RABGGTA-214ENST00000560163 GPANK1O95872 356 aa16.62■□□□□ 0.25
RABGGTA-214ENST00000560163 HOXB9P17482 250 aaPredicted RBP16.62■□□□□ 0.25
RABGGTA-214ENST00000560163 EPHA3P29320 983 aa16.62■□□□□ 0.25
RABGGTA-214ENST00000560163 APLNRP35414 380 aa16.62■□□□□ 0.25
RABGGTA-214ENST00000560163 ZNF362Q5T0B9 420 aaPredicted RBP16.62■□□□□ 0.25
RABGGTA-214ENST00000560163 SPATA46Q5T0L3 261 aa16.62■□□□□ 0.25
RABGGTA-214ENST00000560163 MSANTD1Q6ZTZ1 278 aa16.62■□□□□ 0.25
RABGGTA-214ENST00000560163 KLHL36Q8N4N3 616 aa16.62■□□□□ 0.25
RABGGTA-214ENST00000560163 SPICQ8N5J4 248 aa16.62■□□□□ 0.25
RABGGTA-214ENST00000560163 C10orf53Q8N6V4 93 aa16.62■□□□□ 0.25
RABGGTA-214ENST00000560163 SLC25A40Q8TBP6 338 aa16.62■□□□□ 0.25
RABGGTA-214ENST00000560163 ITCHQ96J02 903 aa16.62■□□□□ 0.25
RABGGTA-214ENST00000560163 POM121L2Q96KW2 1035 aa16.62■□□□□ 0.25
RABGGTA-214ENST00000560163 DCLRE1CQ96SD1 692 aaKnown RBP16.62■□□□□ 0.25
RABGGTA-214ENST00000560163 TMEM27Q9HBJ8 222 aa16.62■□□□□ 0.25
RABGGTA-214ENST00000560163 CYSLTR2Q9NS75 346 aa16.62■□□□□ 0.25
RABGGTA-214ENST00000560163 LOC100509620A0A075B734 347 aa16.61■□□□□ 0.25
RABGGTA-214ENST00000560163 STOMP27105 288 aa16.61■□□□□ 0.25
RABGGTA-214ENST00000560163 LIPAP38571 399 aa16.61■□□□□ 0.25
RABGGTA-214ENST00000560163 RELBQ01201 579 aa16.61■□□□□ 0.25
RABGGTA-214ENST00000560163 FADDQ13158 208 aa16.61■□□□□ 0.25
RABGGTA-214ENST00000560163 MELKQ14680 651 aa16.61■□□□□ 0.25
RABGGTA-214ENST00000560163 PABPC1L2AQ5JQF8 200 aa16.61■□□□□ 0.25
RABGGTA-214ENST00000560163 SWT1Q5T5J6 900 aaKnown RBP16.61■□□□□ 0.25
RABGGTA-214ENST00000560163 PARP8Q8N3A8 854 aa16.61■□□□□ 0.25
RABGGTA-214ENST00000560163 ZNF283Q8N7M2 679 aa16.61■□□□□ 0.25
RABGGTA-214ENST00000560163 GTF2H4Q92759 462 aa16.61■□□□□ 0.25
RABGGTA-214ENST00000560163 MCHR2Q969V1 340 aa16.61■□□□□ 0.25
RABGGTA-214ENST00000560163 DIRC2Q96SL1 478 aa16.61■□□□□ 0.25
RABGGTA-214ENST00000560163 SEPHS2Q99611 448 aa16.61■□□□□ 0.25
RABGGTA-214ENST00000560163 TMEM109Q9BVC6 243 aa16.61■□□□□ 0.25
RABGGTA-214ENST00000560163 MRPL13Q9BYD1 178 aaKnown RBP16.61■□□□□ 0.25
RABGGTA-214ENST00000560163 OR2J1Q9GZK6 312 aa16.61■□□□□ 0.25
RABGGTA-214ENST00000560163 PAIP1Q9H074 479 aaKnown RBP16.61■□□□□ 0.25
RABGGTA-214ENST00000560163 RMND5AQ9H871 391 aa16.61■□□□□ 0.25
RABGGTA-214ENST00000560163 BEX1Q9HBH7 125 aa16.61■□□□□ 0.25
RABGGTA-214ENST00000560163 TMEM106BQ9NUM4 274 aa16.61■□□□□ 0.25
RABGGTA-214ENST00000560163 SELENONQ9NZV5 590 aa16.61■□□□□ 0.25
RABGGTA-214ENST00000560163 IGHV3OR16-10A0A075B7F0 116 aa16.6■□□□□ 0.25
RABGGTA-214ENST00000560163 MDFIC2A0A1B0GVS7 189 aa16.6■□□□□ 0.25
RABGGTA-214ENST00000560163 FAM181BA6NEQ2 426 aa16.6■□□□□ 0.25
RABGGTA-214ENST00000560163 CLIC1O00299 241 aa16.6■□□□□ 0.25
RABGGTA-214ENST00000560163 HOXA3O43365 443 aaPredicted RBP16.6■□□□□ 0.25
RABGGTA-214ENST00000560163 MGRN1O60291 552 aa16.6■□□□□ 0.25
RABGGTA-214ENST00000560163 BGNP21810 368 aa16.6■□□□□ 0.25
RABGGTA-214ENST00000560163 CCNOP22674 350 aa16.6■□□□□ 0.25
RABGGTA-214ENST00000560163 KRTAP10-3P60369 221 aa16.6■□□□□ 0.25
RABGGTA-214ENST00000560163 ZMYND11Q15326 602 aa16.6■□□□□ 0.25
RABGGTA-214ENST00000560163 C17orf107Q6ZR85 190 aa16.6■□□□□ 0.25
RABGGTA-214ENST00000560163 C10orf111Q8N326 155 aa16.6■□□□□ 0.25
RABGGTA-214ENST00000560163 LRRC18Q8N456 261 aa16.6■□□□□ 0.25
RABGGTA-214ENST00000560163 UPRTQ96BW1 309 aa16.6■□□□□ 0.25
RABGGTA-214ENST00000560163 SIGLEC11Q96RL6 698 aa16.6■□□□□ 0.25
RABGGTA-214ENST00000560163 CCT8L2Q96SF2 557 aa16.6■□□□□ 0.25
RABGGTA-214ENST00000560163 CGGBP1Q9UFW8 167 aaPredicted RBP16.6■□□□□ 0.25
RABGGTA-214ENST00000560163 KMT2CQ8NEZ4 4911 aaKnown RBP16.6■□□□□ 0.25
RABGGTA-214ENST00000560163 C5orf58C9J3I9 102 aa16.59■□□□□ 0.25
RABGGTA-214ENST00000560163 M0QZ24 198 aa16.59■□□□□ 0.25
RABGGTA-214ENST00000560163 ICMTO60725 284 aa16.59■□□□□ 0.25
RABGGTA-214ENST00000560163 OR6A2O95222 327 aa16.59■□□□□ 0.25
RABGGTA-214ENST00000560163 IDO1P14902 403 aa16.59■□□□□ 0.25
RABGGTA-214ENST00000560163 ZNF133P52736 654 aaPredicted RBP16.59■□□□□ 0.25
RABGGTA-214ENST00000560163 STX3Q13277 289 aa16.59■□□□□ 0.25
RABGGTA-214ENST00000560163 CDK5R2Q13319 367 aa16.59■□□□□ 0.25
RABGGTA-214ENST00000560163 ZNF74Q16587 644 aa16.59■□□□□ 0.25
RABGGTA-214ENST00000560163 OLFML2AQ68BL7 652 aa16.59■□□□□ 0.25
RABGGTA-214ENST00000560163 ASPHD2Q6ICH7 369 aa16.59■□□□□ 0.25
RABGGTA-214ENST00000560163 C1orf174Q8IYL3 243 aa16.59■□□□□ 0.25
RABGGTA-214ENST00000560163 OR4F5Q8NH21 305 aa16.59■□□□□ 0.25
RABGGTA-214ENST00000560163 NFKBIDQ8NI38 313 aa16.59■□□□□ 0.25
RABGGTA-214ENST00000560163 DACT3Q96B18 629 aaPredicted RBP16.59■□□□□ 0.25
RABGGTA-214ENST00000560163 ZNF347Q96SE7 839 aa16.59■□□□□ 0.25
RABGGTA-214ENST00000560163 ARHGDIGQ99819 225 aa16.59■□□□□ 0.25
RABGGTA-214ENST00000560163 MSL2Q9HCI7 577 aa16.59■□□□□ 0.25
RABGGTA-214ENST00000560163 SDR39U1Q9NRG7 319 aaPredicted RBP16.59■□□□□ 0.25
RABGGTA-214ENST00000560163 RNF13O43567 381 aa16.58■□□□□ 0.24
RABGGTA-214ENST00000560163 NDUFA7O95182 113 aa16.58■□□□□ 0.24
RABGGTA-214ENST00000560163 RAG2P55895 527 aa16.58■□□□□ 0.24
RABGGTA-214ENST00000560163 RGS8P57771 180 aaPredicted RBP16.58■□□□□ 0.24
RABGGTA-214ENST00000560163 NCALDP61601 193 aa16.58■□□□□ 0.24
RABGGTA-214ENST00000560163 BTG1P62324 171 aa16.58■□□□□ 0.24
RABGGTA-214ENST00000560163 TNFAIP6P98066 277 aaPredicted RBP16.58■□□□□ 0.24
RABGGTA-214ENST00000560163 HSF2Q03933 536 aa16.58■□□□□ 0.24
RABGGTA-214ENST00000560163 FBLN7Q53RD9 439 aa16.58■□□□□ 0.24
RABGGTA-214ENST00000560163 C6orf10Q5SRN2 563 aa16.58■□□□□ 0.24
RABGGTA-214ENST00000560163 REEP3Q6NUK4 255 aa16.58■□□□□ 0.24
RABGGTA-214ENST00000560163 CROCCP2Q86T23 111 aa16.58■□□□□ 0.24
RABGGTA-214ENST00000560163 RBM4BQ9BQ04 359 aaKnown RBP16.58■□□□□ 0.24
RABGGTA-214ENST00000560163 SPATA5L1Q9BVQ7 753 aa16.58■□□□□ 0.24
RABGGTA-214ENST00000560163 RAD21L1Q9H4I0 556 aa16.58■□□□□ 0.24
RABGGTA-214ENST00000560163 SIAEQ9HAT2 523 aa16.58■□□□□ 0.24
RABGGTA-214ENST00000560163 C1RLQ9NZP8 487 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms