RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 ANKRD34BA5PLL1 514 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 RIIAD1A6NNX1 92 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 H0YJX3 145 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 SLC1A7O00341 560 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 SLC16A6O15403 523 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 SELENOFO60613 162 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 SLC16A7O60669 478 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 EIF1BO60739 113 aaKnown RBP4.6□□□□□ -1.67
SPG11-220ENST00000559933 MPZL1O95297 269 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 TXNDC12O95881 172 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 BCL10O95999 233 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 IGHMP01871 453 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 RPSAP08865 295 aaKnown RBP4.6□□□□□ -1.67
SPG11-220ENST00000559933 PGA4P0DJD7 388 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 PGA3P0DJD8 388 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 ACADSP16219 412 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 ZNF43P17038 809 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 GNLYP22749 145 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 ACVR2AP27037 513 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 AGTR1P30556 359 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 CD79BP40259 229 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 NAA10P41227 235 aaPredicted RBP4.6□□□□□ -1.67
SPG11-220ENST00000559933 HSPA13P48723 471 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 CENPAP49450 140 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 CLK1P49759 484 aaKnown RBP4.6□□□□□ -1.67
SPG11-220ENST00000559933 RPS6KA3P51812 740 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 MAP2K6P52564 334 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 HCCSP53701 268 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 SLC16A1P53985 500 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 CDH15P55291 814 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 CLRN1P58418 232 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 CDC42P60953 191 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 ISL1P61371 349 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 RPS7P62081 194 aaKnown RBP4.6□□□□□ -1.67
SPG11-220ENST00000559933 EFNB1P98172 346 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 TLE1Q04724 770 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 ZNF91Q05481 1191 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 ZP4Q12836 540 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 ITGADQ13349 1161 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 MFSD13AQ14CX5 517 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 BCL2A1Q16548 175 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 KLHL12Q53G59 568 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 SOWAHCQ53LP3 525 aaPredicted RBP4.6□□□□□ -1.67
SPG11-220ENST00000559933 PDSS1Q5T2R2 415 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 AADACL4Q5VUY2 407 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 TTC23Q5W5X9 447 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 RPL13AP3Q6NVV1 102 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 CHMP1BQ7LBR1 199 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 CXXC5Q7LFL8 322 aaKnown RBP4.6□□□□□ -1.67
SPG11-220ENST00000559933 AAED1Q7RTV5 226 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 PXKQ7Z7A4 578 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 DOLPP1Q86YN1 238 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 TMEM123Q8N131 208 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 ZNF786Q8N393 782 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 ARIH2OSQ8N7S6 290 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 CNEP1R1Q8N9A8 125 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 NPEPL1Q8NDH3 523 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 BPIFB6Q8NFQ5 453 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 PTP4A1Q93096 173 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 ZMYND19Q96E35 227 aaPredicted RBP4.6□□□□□ -1.67
SPG11-220ENST00000559933 DTNBP1Q96EV8 351 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 RCC1LQ96I51 464 aaKnown RBP4.6□□□□□ -1.67
SPG11-220ENST00000559933 PLEKHA8Q96JA3 519 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 ZNF582Q96NG8 517 aaPredicted RBP4.6□□□□□ -1.67
SPG11-220ENST00000559933 RDH12Q96NR8 316 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 DDOQ99489 341 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 TBX5Q99593 518 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 NUAK2Q9H093 628 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 OPN3Q9H1Y3 402 aaPredicted RBP4.6□□□□□ -1.67
SPG11-220ENST00000559933 RNF122Q9H9V4 155 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 TIGARQ9NQ88 270 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 C8orf4Q9NR00 106 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 ASB6Q9NWX5 421 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 CGGBP1Q9UFW8 167 aaPredicted RBP4.6□□□□□ -1.67
SPG11-220ENST00000559933 PRDM4Q9UKN5 801 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 OSGIN2Q9Y236 505 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 RASD1Q9Y272 281 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 B3GALT5Q9Y2C3 310 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 ZNF835Q9Y2P0 537 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 NOSIPQ9Y314 301 aaKnown RBP4.6□□□□□ -1.67
SPG11-220ENST00000559933 LRRC42Q9Y546 428 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 ARHGAP21Q5T5U3 1957 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 ZGRF1Q86YA3 2104 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 PTPN13Q12923 2485 aa4.6□□□□□ -1.67
SPG11-220ENST00000559933 IGKV3D-15A0A087WSY6 115 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 IGLV1-36A0A0B4J1U3 117 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 A0A0G2JNJ9 132 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 A0A1W2PPL8 197 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 A0A1W2PR80 420 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 PRSS37A4D1T9 235 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 MBD3L4A6NDZ8 208 aaPredicted RBP4.59□□□□□ -1.67
SPG11-220ENST00000559933 MBD3L3A6NE82 208 aaPredicted RBP4.59□□□□□ -1.67
SPG11-220ENST00000559933 MBD3L5A6NJ08 208 aaPredicted RBP4.59□□□□□ -1.67
SPG11-220ENST00000559933 PRR32B1ATL7 298 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 PRR23D1E9PI22 279 aaPredicted RBP4.59□□□□□ -1.67
SPG11-220ENST00000559933 H0YAE9 185 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 XKRYO14609 159 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 ARPC3O15145 178 aa4.59□□□□□ -1.67
SPG11-220ENST00000559933 MAGEB4O15481 346 aaPredicted RBP4.59□□□□□ -1.67
SPG11-220ENST00000559933 DENRO43583 198 aaKnown RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms