RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 PABPC1L2AQ5JQF8 200 aa15.18■□□□□ 0.02
HDDC3-205ENST00000559898 FAM166AQ6J272 317 aa15.18■□□□□ 0.02
HDDC3-205ENST00000559898 TMEM53Q6P2H8 277 aa15.18■□□□□ 0.02
HDDC3-205ENST00000559898 OFCC1Q8IZS5 231 aa15.18■□□□□ 0.02
HDDC3-205ENST00000559898 FAM86B1Q8N7N1 296 aa15.18■□□□□ 0.02
HDDC3-205ENST00000559898 ICA1LQ8NDH6 482 aa15.18■□□□□ 0.02
HDDC3-205ENST00000559898 ZNF519Q8TB69 540 aa15.18■□□□□ 0.02
HDDC3-205ENST00000559898 ELAC2Q9BQ52 826 aaKnown RBP15.18■□□□□ 0.02
HDDC3-205ENST00000559898 MYLK2Q9H1R3 596 aa15.18■□□□□ 0.02
HDDC3-205ENST00000559898 DENND2DQ9H6A0 471 aaPredicted RBP15.18■□□□□ 0.02
HDDC3-205ENST00000559898 TMEM160Q9NX00 188 aa15.18■□□□□ 0.02
HDDC3-205ENST00000559898 TAAR3PQ9P1P4 343 aa15.18■□□□□ 0.02
HDDC3-205ENST00000559898 CDC42EP3Q9UKI2 254 aa15.18■□□□□ 0.02
HDDC3-205ENST00000559898 RNF212BA8MTL3 300 aa15.17■□□□□ 0.02
HDDC3-205ENST00000559898 SLC22A2O15244 555 aa15.17■□□□□ 0.02
HDDC3-205ENST00000559898 PHF1O43189 567 aaPredicted RBP15.17■□□□□ 0.02
HDDC3-205ENST00000559898 FARS2O95363 451 aaKnown RBP15.17■□□□□ 0.02
HDDC3-205ENST00000559898 EVX1P49640 407 aa15.17■□□□□ 0.02
HDDC3-205ENST00000559898 NUDT2P50583 147 aa15.17■□□□□ 0.02
HDDC3-205ENST00000559898 DAP3P51398 398 aaKnown RBP15.17■□□□□ 0.02
HDDC3-205ENST00000559898 ZNF84P51523 738 aa15.17■□□□□ 0.02
HDDC3-205ENST00000559898 RPL27P61353 136 aaKnown RBP15.17■□□□□ 0.02
HDDC3-205ENST00000559898 MRPS34P82930 218 aaKnown RBP15.17■□□□□ 0.02
HDDC3-205ENST00000559898 PRKCDQ05655 676 aa15.17■□□□□ 0.02
HDDC3-205ENST00000559898 CD47Q08722 323 aa15.17■□□□□ 0.02
HDDC3-205ENST00000559898 SPATA46Q5T0L3 261 aa15.17■□□□□ 0.02
HDDC3-205ENST00000559898 RGS7BPQ6MZT1 257 aaPredicted RBP15.17■□□□□ 0.02
HDDC3-205ENST00000559898 PODNL1Q6PEZ8 512 aa15.17■□□□□ 0.02
HDDC3-205ENST00000559898 ZNF101Q8IZC7 436 aa15.17■□□□□ 0.02
HDDC3-205ENST00000559898 FNDC11Q9BVV2 318 aa15.17■□□□□ 0.02
HDDC3-205ENST00000559898 SHARPINQ9H0F6 387 aa15.17■□□□□ 0.02
HDDC3-205ENST00000559898 CDH20Q9HBT6 801 aa15.17■□□□□ 0.02
HDDC3-205ENST00000559898 EGFL7Q9UHF1 273 aa15.17■□□□□ 0.02
HDDC3-205ENST00000559898 KCNS2Q9ULS6 477 aa15.17■□□□□ 0.02
HDDC3-205ENST00000559898 ADAM18Q9Y3Q7 739 aa15.17■□□□□ 0.02
HDDC3-205ENST00000559898 SPEF1Q9Y4P9 236 aa15.17■□□□□ 0.02
HDDC3-205ENST00000559898 A0A1W2PPW3 197 aa15.16■□□□□ 0.02
HDDC3-205ENST00000559898 VSTM5A8MXK1 200 aa15.16■□□□□ 0.02
HDDC3-205ENST00000559898 DIRAS1O95057 198 aa15.16■□□□□ 0.02
HDDC3-205ENST00000559898 IGHMP01871 453 aa15.16■□□□□ 0.02
HDDC3-205ENST00000559898 IFNW1P05000 195 aa15.16■□□□□ 0.02
HDDC3-205ENST00000559898 LCKP06239 509 aa15.16■□□□□ 0.02
HDDC3-205ENST00000559898 SAGP10523 405 aaPredicted RBP15.16■□□□□ 0.02
HDDC3-205ENST00000559898 CCNOP22674 350 aa15.16■□□□□ 0.02
HDDC3-205ENST00000559898 LAP3P28838 519 aa15.16■□□□□ 0.02
HDDC3-205ENST00000559898 MPV17P39210 176 aa15.16■□□□□ 0.02
HDDC3-205ENST00000559898 PSG4Q00888 419 aa15.16■□□□□ 0.02
HDDC3-205ENST00000559898 SLC36A2Q495M3 483 aa15.16■□□□□ 0.02
HDDC3-205ENST00000559898 IFI44LQ53G44 452 aa15.16■□□□□ 0.02
HDDC3-205ENST00000559898 UGT2A3Q6UWM9 527 aa15.16■□□□□ 0.02
HDDC3-205ENST00000559898 RNF148Q8N7C7 305 aa15.16■□□□□ 0.02
HDDC3-205ENST00000559898 FAM156AQ8NDB6 213 aa15.16■□□□□ 0.02
HDDC3-205ENST00000559898 WNT5BQ9H1J7 359 aa15.16■□□□□ 0.02
HDDC3-205ENST00000559898 SIAEQ9HAT2 523 aa15.16■□□□□ 0.02
HDDC3-205ENST00000559898 ZNF275Q9NSD4 429 aaPredicted RBP15.16■□□□□ 0.02
HDDC3-205ENST00000559898 CACNG2Q9Y698 323 aa15.16■□□□□ 0.02
HDDC3-205ENST00000559898 IGLV3-9A0A075B6K5 115 aa15.15■□□□□ 0.02
HDDC3-205ENST00000559898 FAM157AC9JC47 383 aa15.15■□□□□ 0.02
HDDC3-205ENST00000559898 GSTA4O15217 222 aa15.15■□□□□ 0.02
HDDC3-205ENST00000559898 ZNF250P15622 560 aa15.15■□□□□ 0.02
HDDC3-205ENST00000559898 GYS2P54840 703 aa15.15■□□□□ 0.02
HDDC3-205ENST00000559898 UCP2P55851 309 aa15.15■□□□□ 0.02
HDDC3-205ENST00000559898 PSME3P61289 254 aa15.15■□□□□ 0.02
HDDC3-205ENST00000559898 ENDOGQ14249 297 aaKnown RBP15.15■□□□□ 0.02
HDDC3-205ENST00000559898 TRAM2Q15035 370 aa15.15■□□□□ 0.02
HDDC3-205ENST00000559898 CR1LQ2VPA4 569 aa15.15■□□□□ 0.02
HDDC3-205ENST00000559898 SPRNQ5BIV9 151 aa15.15■□□□□ 0.02
HDDC3-205ENST00000559898 CLDND2Q8NHS1 167 aa15.15■□□□□ 0.02
HDDC3-205ENST00000559898 GEMIN6Q8WXD5 167 aaKnown RBP15.15■□□□□ 0.02
HDDC3-205ENST00000559898 POM121L2Q96KW2 1035 aa15.15■□□□□ 0.02
HDDC3-205ENST00000559898 FAM107BQ9H098 131 aa15.15■□□□□ 0.02
HDDC3-205ENST00000559898 MRGBPQ9NV56 204 aa15.15■□□□□ 0.02
HDDC3-205ENST00000559898 NPIPB13A6NJU9 1138 aa15.14■□□□□ 0.01
HDDC3-205ENST00000559898 EFCAB9A8MZ26 197 aa15.14■□□□□ 0.01
HDDC3-205ENST00000559898 CENPBD1B2RD01 187 aa15.14■□□□□ 0.01
HDDC3-205ENST00000559898 NPIPB4C9JG80 1138 aa15.14■□□□□ 0.01
HDDC3-205ENST00000559898 CDC14BO60729 498 aa15.14■□□□□ 0.01
HDDC3-205ENST00000559898 RP2O75695 350 aa15.14■□□□□ 0.01
HDDC3-205ENST00000559898 CHN2P52757 468 aa15.14■□□□□ 0.01
HDDC3-205ENST00000559898 FXYD6P3P58550 94 aa15.14■□□□□ 0.01
HDDC3-205ENST00000559898 RPS23P62266 143 aaKnown RBP15.14■□□□□ 0.01
HDDC3-205ENST00000559898 CCL8P80075 99 aa15.14■□□□□ 0.01
HDDC3-205ENST00000559898 HSF2Q03933 536 aa15.14■□□□□ 0.01
HDDC3-205ENST00000559898 SEC23BQ15437 767 aa15.14■□□□□ 0.01
HDDC3-205ENST00000559898 TBC1D28Q2M2D7 210 aa15.14■□□□□ 0.01
HDDC3-205ENST00000559898 KRTAP24-1Q3LI83 254 aa15.14■□□□□ 0.01
HDDC3-205ENST00000559898 HSP90B2PQ58FF3 399 aa15.14■□□□□ 0.01
HDDC3-205ENST00000559898 MESTQ5EB52 335 aa15.14■□□□□ 0.01
HDDC3-205ENST00000559898 ZNF730Q6ZMV8 503 aa15.14■□□□□ 0.01
HDDC3-205ENST00000559898 RFPL4BQ6ZWI9 263 aa15.14■□□□□ 0.01
HDDC3-205ENST00000559898 FKBP9P1Q75LS8 142 aa15.14■□□□□ 0.01
HDDC3-205ENST00000559898 ARPINQ7Z6K5 226 aa15.14■□□□□ 0.01
HDDC3-205ENST00000559898 OAFQ86UD1 273 aa15.14■□□□□ 0.01
HDDC3-205ENST00000559898 OR1J1Q8NGS3 322 aa15.14■□□□□ 0.01
HDDC3-205ENST00000559898 SYNPRQ8TBG9 265 aa15.14■□□□□ 0.01
HDDC3-205ENST00000559898 ACOT11Q8WXI4 607 aaPredicted RBP15.14■□□□□ 0.01
HDDC3-205ENST00000559898 LZICQ8WZA0 190 aa15.14■□□□□ 0.01
HDDC3-205ENST00000559898 FAM162AQ96A26 154 aa15.14■□□□□ 0.01
HDDC3-205ENST00000559898 FAM46AQ96IP4 442 aaKnown RBP15.14■□□□□ 0.01
HDDC3-205ENST00000559898 Q96M85 177 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms