RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 NME1P15531 152 aaKnown RBP6.51□□□□□ -1.37
USP3-210ENST00000559192 C5AR1P21730 350 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 FXYD4P59646 89 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 OR2B8PP59922 312 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 CDKN3Q16667 212 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 PLA1AQ53H76 456 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 PRAMEF8Q5VWM4 474 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 PRAMEF7Q5VXH5 474 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 CST9LP1Q5W188 147 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 PLPP6Q8IY26 295 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 OR2AK2Q8NG84 335 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 YIPF5Q969M3 257 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 URM1Q9BTM9 101 aaKnown RBP6.51□□□□□ -1.37
USP3-210ENST00000559192 APOBEC3BQ9UH17 382 aaKnown RBP6.51□□□□□ -1.37
USP3-210ENST00000559192 MSRAQ9UJ68 235 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 ING1Q9UK53 422 aaPredicted RBP6.51□□□□□ -1.37
USP3-210ENST00000559192 ELF5Q9UKW6 265 aaPredicted RBP6.51□□□□□ -1.37
USP3-210ENST00000559192 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.51□□□□□ -1.37
USP3-210ENST00000559192 TMEM235A6NFC5 223 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 SUSD5O60279 629 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 GLCEO94923 617 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 TAGLN2P37802 199 aaKnown RBP6.51□□□□□ -1.37
USP3-210ENST00000559192 SGCAQ16586 387 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 LIPNQ5VXI9 398 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 METRNLQ641Q3 311 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 ADAMTSL4Q6UY14 1074 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 TMEM91Q6ZNR0 172 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 LSRQ86X29 649 aaPredicted RBP6.51□□□□□ -1.37
USP3-210ENST00000559192 OR1E3Q8WZA6 343 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 CORO2AQ92828 525 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 RBP7Q96R05 134 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 WDR76Q9H967 626 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 TAS2R5Q9NYW4 299 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 IL20Q9NYY1 176 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 AGFG1P52594 562 aaKnown RBP6.51□□□□□ -1.37
USP3-210ENST00000559192 TAS2R31P59538 309 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 HNRNPKP61978 463 aaKnown RBP eCLIP6.51□□□□□ -1.37
USP3-210ENST00000559192 PLA2G7Q13093 441 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 MELKQ14680 651 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 WBP2NLQ6ICG8 309 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 GABRG1Q8N1C3 465 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 DIO2Q92813 273 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 NINJ1Q92982 152 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 TOMM40LQ969M1 308 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 SLC6A17Q9H1V8 727 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 PPP1R3EQ9H7J1 279 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 ADGRL4Q9HBW9 690 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 TAS2R4Q9NYW5 299 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 CSAG2Q9Y5P2 127 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 TRAV1-2A0A0B4J238 106 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 A0A0B4J293 547 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 POM121BA6NF01 834 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 APBB3O95704 486 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 OR4E1P0C645 316 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 PGCP20142 388 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 POLR2HP52434 150 aaKnown RBP6.51□□□□□ -1.37
USP3-210ENST00000559192 SNU13P55769 128 aaKnown RBP6.51□□□□□ -1.37
USP3-210ENST00000559192 MEP1BQ16820 701 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 EID2Q8N6I1 236 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 OR5M8Q8NGP6 311 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 OR4K15Q8NH41 348 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 LMX1AQ8TE12 382 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 RNF141Q8WVD5 230 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 SORCS2Q96PQ0 1159 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 CRLF2Q9HC73 371 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 SLC2A9Q9NRM0 540 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 CA10Q9NS85 328 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 C2orf42Q9NWW7 574 aa6.51□□□□□ -1.37
USP3-210ENST00000559192 OR5H14A6NHG9 310 aa6.5□□□□□ -1.37
USP3-210ENST00000559192 TUBAL3A6NHL2 446 aa6.5□□□□□ -1.37
USP3-210ENST00000559192 IGF2P01344 180 aa6.5□□□□□ -1.37
USP3-210ENST00000559192 OPN1LWP04000 364 aa6.5□□□□□ -1.37
USP3-210ENST00000559192 NID1P14543 1247 aa6.5□□□□□ -1.37
USP3-210ENST00000559192 SNRPNP63162 240 aaKnown RBP6.5□□□□□ -1.37
USP3-210ENST00000559192 EEF1A2Q05639 463 aaKnown RBP6.5□□□□□ -1.37
USP3-210ENST00000559192 DUSP8Q13202 625 aa6.5□□□□□ -1.37
USP3-210ENST00000559192 PHYHD1Q5SRE7 291 aa6.5□□□□□ -1.37
USP3-210ENST00000559192 CST9Q5W186 159 aa6.5□□□□□ -1.37
USP3-210ENST00000559192 LINC00346Q8IVM7 164 aa6.5□□□□□ -1.37
USP3-210ENST00000559192 OR1J2Q8NGS2 313 aa6.5□□□□□ -1.37
USP3-210ENST00000559192 SLC6A18Q96N87 628 aa6.5□□□□□ -1.37
USP3-210ENST00000559192 ADOQ96SZ5 270 aa6.5□□□□□ -1.37
USP3-210ENST00000559192 KCNK15Q9H427 330 aa6.5□□□□□ -1.37
USP3-210ENST00000559192 ZDHHC11Q9H8X9 412 aa6.5□□□□□ -1.37
USP3-210ENST00000559192 EMC9Q9Y3B6 208 aa6.5□□□□□ -1.37
USP3-210ENST00000559192 POMT1Q9Y6A1 747 aa6.5□□□□□ -1.37
USP3-210ENST00000559192 PARP14Q460N5 1801 aa6.5□□□□□ -1.37
USP3-210ENST00000559192 NYNRINQ9P2P1 1898 aaKnown RBP6.5□□□□□ -1.37
USP3-210ENST00000559192 TMEM269A0A1B0GVZ9 245 aa6.5□□□□□ -1.37
USP3-210ENST00000559192 ZNF587BE7ETH6 402 aa6.5□□□□□ -1.37
USP3-210ENST00000559192 P2RY10O00398 339 aa6.5□□□□□ -1.37
USP3-210ENST00000559192 PLPP2O43688 288 aa6.5□□□□□ -1.37
USP3-210ENST00000559192 CIDEAO60543 219 aa6.5□□□□□ -1.37
USP3-210ENST00000559192 ATG12O94817 140 aa6.5□□□□□ -1.37
USP3-210ENST00000559192 DIRAS3O95661 229 aa6.5□□□□□ -1.37
USP3-210ENST00000559192 ANKRD34CP0C6C1 535 aa6.5□□□□□ -1.37
USP3-210ENST00000559192 EPHA4P54764 986 aa6.5□□□□□ -1.37
USP3-210ENST00000559192 ZNF770Q6IQ21 691 aaPredicted RBP6.5□□□□□ -1.37
USP3-210ENST00000559192 CD300LDQ6UXZ3 194 aa6.5□□□□□ -1.37
USP3-210ENST00000559192 FNDC9Q8TBE3 224 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms