RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 HDDC2Q7Z4H3 204 aa9.94□□□□□ -0.82
SNX1-204ENST00000559061 OR6V1Q8N148 313 aa9.94□□□□□ -0.82
SNX1-204ENST00000559061 SLC37A3Q8NCC5 494 aa9.94□□□□□ -0.82
SNX1-204ENST00000559061 SNX18Q96RF0 628 aa9.94□□□□□ -0.82
SNX1-204ENST00000559061 RBM4Q9BWF3 364 aaKnown RBP9.94□□□□□ -0.82
SNX1-204ENST00000559061 TSSK6Q9BXA6 273 aa9.94□□□□□ -0.82
SNX1-204ENST00000559061 HCAR1Q9BXC0 346 aa9.94□□□□□ -0.82
SNX1-204ENST00000559061 NMNAT2Q9BZQ4 307 aa9.94□□□□□ -0.82
SNX1-204ENST00000559061 NUAK2Q9H093 628 aa9.94□□□□□ -0.82
SNX1-204ENST00000559061 S100A14Q9HCY8 104 aa9.94□□□□□ -0.82
SNX1-204ENST00000559061 OBP2BQ9NPH6 170 aa9.94□□□□□ -0.82
SNX1-204ENST00000559061 POLE4Q9NR33 117 aa9.94□□□□□ -0.82
SNX1-204ENST00000559061 TBC1D23Q9NUY8 699 aa9.94□□□□□ -0.82
SNX1-204ENST00000559061 STX18Q9P2W9 335 aaKnown RBP9.94□□□□□ -0.82
SNX1-204ENST00000559061 OAZ3Q9UMX2 235 aa9.94□□□□□ -0.82
SNX1-204ENST00000559061 POFUT2Q9Y2G5 429 aa9.94□□□□□ -0.82
SNX1-204ENST00000559061 SPG11Q96JI7 2443 aa9.94□□□□□ -0.82
SNX1-204ENST00000559061 RTTNQ86VV8 2226 aa9.93□□□□□ -0.82
SNX1-204ENST00000559061 SAC3D1A6NKF1 404 aa9.93□□□□□ -0.82
SNX1-204ENST00000559061 M0R1B8 84 aa9.93□□□□□ -0.82
SNX1-204ENST00000559061 ABCD4O14678 606 aa9.93□□□□□ -0.82
SNX1-204ENST00000559061 CASKO14936 926 aa9.93□□□□□ -0.82
SNX1-204ENST00000559061 AHCYL1O43865 530 aa9.93□□□□□ -0.82
SNX1-204ENST00000559061 SLC16A7O60669 478 aa9.93□□□□□ -0.82
SNX1-204ENST00000559061 CLUP10909 449 aa9.93□□□□□ -0.82
SNX1-204ENST00000559061 OSMP13725 252 aa9.93□□□□□ -0.82
SNX1-204ENST00000559061 HOXB1P14653 301 aaPredicted RBP9.93□□□□□ -0.82
SNX1-204ENST00000559061 CBR1P16152 277 aa9.93□□□□□ -0.82
SNX1-204ENST00000559061 GSTM3P21266 225 aa9.93□□□□□ -0.82
SNX1-204ENST00000559061 CDK5Q00535 292 aa9.93□□□□□ -0.82
SNX1-204ENST00000559061 PIGFQ07326 219 aa9.93□□□□□ -0.82
SNX1-204ENST00000559061 COX10Q12887 443 aa9.93□□□□□ -0.82
SNX1-204ENST00000559061 MSMPQ1L6U9 139 aa9.93□□□□□ -0.82
SNX1-204ENST00000559061 NRN1LQ496H8 165 aa9.93□□□□□ -0.82
SNX1-204ENST00000559061 TMEM236Q5W0B7 351 aa9.93□□□□□ -0.82
SNX1-204ENST00000559061 RPL13AP3Q6NVV1 102 aa9.93□□□□□ -0.82
SNX1-204ENST00000559061 LEG1Q6P5S2 330 aa9.93□□□□□ -0.82
SNX1-204ENST00000559061 LYPD4Q6UWN0 246 aa9.93□□□□□ -0.82
SNX1-204ENST00000559061 ADCK1Q86TW2 530 aa9.93□□□□□ -0.82
SNX1-204ENST00000559061 ZBTB46Q86UZ6 589 aa9.93□□□□□ -0.82
SNX1-204ENST00000559061 PARP8Q8N3A8 854 aa9.93□□□□□ -0.82
SNX1-204ENST00000559061 PAQR4Q8N4S7 273 aaPredicted RBP9.93□□□□□ -0.82
SNX1-204ENST00000559061 FAM169BQ8N8A8 192 aa9.93□□□□□ -0.82
SNX1-204ENST00000559061 CYB561A3Q8NBI2 242 aa9.93□□□□□ -0.82
SNX1-204ENST00000559061 OR52E2Q8NGJ4 325 aa9.93□□□□□ -0.82
SNX1-204ENST00000559061 MUCL1Q96DR8 90 aa9.93□□□□□ -0.82
SNX1-204ENST00000559061 CENPNQ96H22 339 aaPredicted RBP9.93□□□□□ -0.82
SNX1-204ENST00000559061 SLC38A2Q96QD8 506 aa9.93□□□□□ -0.82
SNX1-204ENST00000559061 RAB3IPQ96QF0 476 aaPredicted RBP9.93□□□□□ -0.82
SNX1-204ENST00000559061 HEATR1Q9H583 2144 aaKnown RBP9.93□□□□□ -0.82
SNX1-204ENST00000559061 EMC7Q9NPA0 242 aa9.93□□□□□ -0.82
SNX1-204ENST00000559061 RNF115Q9Y4L5 304 aa9.93□□□□□ -0.82
SNX1-204ENST00000559061 DSCAMO60469 2012 aa9.92□□□□□ -0.82
SNX1-204ENST00000559061 FAM171A2A8MVW0 826 aa9.92□□□□□ -0.82
SNX1-204ENST00000559061 E7EQL1 145 aa9.92□□□□□ -0.82
SNX1-204ENST00000559061 ATP6V1G2-DDX39BF2Z307 99 aa9.92□□□□□ -0.82
SNX1-204ENST00000559061 G3V2T6 193 aa9.92□□□□□ -0.82
SNX1-204ENST00000559061 IDH3BO43837 385 aa9.92□□□□□ -0.82
SNX1-204ENST00000559061 ATE1O95260 518 aa9.92□□□□□ -0.82
SNX1-204ENST00000559061 TFP02787 698 aa9.92□□□□□ -0.82
SNX1-204ENST00000559061 OR8G3PP0DMU2 310 aa9.92□□□□□ -0.82
SNX1-204ENST00000559061 FCGR1AP12314 374 aa9.92□□□□□ -0.82
SNX1-204ENST00000559061 ANXA8P13928 327 aa9.92□□□□□ -0.82
SNX1-204ENST00000559061 LAP3P28838 519 aa9.92□□□□□ -0.82
SNX1-204ENST00000559061 POLR2IP36954 125 aaKnown RBP9.92□□□□□ -0.82
SNX1-204ENST00000559061 GIPRP48546 466 aa9.92□□□□□ -0.82
SNX1-204ENST00000559061 IDH3GP51553 393 aaPredicted RBP9.92□□□□□ -0.82
SNX1-204ENST00000559061 NR1H2P55055 460 aa9.92□□□□□ -0.82
SNX1-204ENST00000559061 UBE2NP61088 152 aaKnown RBP9.92□□□□□ -0.82
SNX1-204ENST00000559061 NAAAQ02083 359 aa9.92□□□□□ -0.82
SNX1-204ENST00000559061 HGFACQ04756 655 aa9.92□□□□□ -0.82
SNX1-204ENST00000559061 CRMP1Q14194 572 aa9.92□□□□□ -0.82
SNX1-204ENST00000559061 MEP1BQ16820 701 aa9.92□□□□□ -0.82
SNX1-204ENST00000559061 C3orf36Q3SXR2 165 aa9.92□□□□□ -0.82
SNX1-204ENST00000559061 ZNF672Q499Z4 452 aaPredicted RBP9.92□□□□□ -0.82
SNX1-204ENST00000559061 C1QTNF12Q5T7M4 302 aa9.92□□□□□ -0.82
SNX1-204ENST00000559061 FAM27BQ5VT28 67 aa9.92□□□□□ -0.82
SNX1-204ENST00000559061 ZFP1Q6P2D0 407 aa9.92□□□□□ -0.82
SNX1-204ENST00000559061 PAMR1Q6UXH9 720 aa9.92□□□□□ -0.82
SNX1-204ENST00000559061 LRRC18Q8N456 261 aa9.92□□□□□ -0.82
SNX1-204ENST00000559061 CPEB3Q8NE35 698 aaKnown RBP9.92□□□□□ -0.82
SNX1-204ENST00000559061 AKAP1Q92667 903 aaKnown RBP eCLIP9.92□□□□□ -0.82
SNX1-204ENST00000559061 CIB1Q99828 191 aa9.92□□□□□ -0.82
SNX1-204ENST00000559061 ZNF416Q9BWM5 594 aa9.92□□□□□ -0.82
SNX1-204ENST00000559061 OSBPL10Q9BXB5 764 aa9.92□□□□□ -0.82
SNX1-204ENST00000559061 SIAEQ9HAT2 523 aa9.92□□□□□ -0.82
SNX1-204ENST00000559061 SLC25A19Q9HC21 320 aa9.92□□□□□ -0.82
SNX1-204ENST00000559061 RPRD1BQ9NQG5 326 aaKnown RBP9.92□□□□□ -0.82
SNX1-204ENST00000559061 MRPL22Q9NWU5 206 aaKnown RBP9.92□□□□□ -0.82
SNX1-204ENST00000559061 B9D1Q9UPM9 204 aa9.92□□□□□ -0.82
SNX1-204ENST00000559061 COA3Q9Y2R0 106 aaPredicted RBP9.92□□□□□ -0.82
SNX1-204ENST00000559061 ANKRD17O75179 2603 aaKnown RBP9.91□□□□□ -0.82
SNX1-204ENST00000559061 TEX15Q9BXT5 2789 aa9.91□□□□□ -0.82
SNX1-204ENST00000559061 IGHV2OR16-5A0A0B4J2B6 119 aa9.91□□□□□ -0.82
SNX1-204ENST00000559061 A0A1W2PPL8 197 aa9.91□□□□□ -0.82
SNX1-204ENST00000559061 ERICH4A6NGS2 130 aa9.91□□□□□ -0.82
SNX1-204ENST00000559061 M0R129 80 aa9.91□□□□□ -0.82
SNX1-204ENST00000559061 XKRYO14609 159 aa9.91□□□□□ -0.82
SNX1-204ENST00000559061 HS3ST1O14792 307 aa9.91□□□□□ -0.82
SNX1-204ENST00000559061 WNT11O96014 354 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms