RNA–Protein interactions for RNA: ENST00000558285.5

USP3-208, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best) BASIC

Gene USP3, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-208ENST00000558285 PCNX3Q9H6A9 2034 aa7.6□□□□□ -1.19
USP3-208ENST00000558285 TCRBV3S1A0A5B6 114 aa7.6□□□□□ -1.19
USP3-208ENST00000558285 A6NIZ1 184 aa7.6□□□□□ -1.19
USP3-208ENST00000558285 BLOC1S5-TXNDC5H3BN57 136 aa7.6□□□□□ -1.19
USP3-208ENST00000558285 BET1O15155 118 aa7.6□□□□□ -1.19
USP3-208ENST00000558285 SHOXO15266 292 aa7.6□□□□□ -1.19
USP3-208ENST00000558285 WIPF1O43516 503 aa7.6□□□□□ -1.19
USP3-208ENST00000558285 RAMP1O60894 148 aa7.6□□□□□ -1.19
USP3-208ENST00000558285 SERPINI2O75830 405 aa7.6□□□□□ -1.19
USP3-208ENST00000558285 TSPAN9O75954 239 aa7.6□□□□□ -1.19
USP3-208ENST00000558285 UBL3O95164 117 aa7.6□□□□□ -1.19
USP3-208ENST00000558285 RAB36O95755 333 aa7.6□□□□□ -1.19
USP3-208ENST00000558285 SERPINA1P01009 418 aa7.6□□□□□ -1.19
USP3-208ENST00000558285 SAGP10523 405 aaPredicted RBP7.6□□□□□ -1.19
USP3-208ENST00000558285 FCGR1AP12314 374 aa7.6□□□□□ -1.19
USP3-208ENST00000558285 ZNF182P17025 639 aaPredicted RBP7.6□□□□□ -1.19
USP3-208ENST00000558285 FUT1P19526 365 aa7.6□□□□□ -1.19
USP3-208ENST00000558285 CBLP22681 906 aa7.6□□□□□ -1.19
USP3-208ENST00000558285 CD40P25942 277 aa7.6□□□□□ -1.19
USP3-208ENST00000558285 GSK3BP49841 420 aa7.6□□□□□ -1.19
USP3-208ENST00000558285 AP2S1P53680 142 aaPredicted RBP7.6□□□□□ -1.19
USP3-208ENST00000558285 ATP5J2P56134 94 aa7.6□□□□□ -1.19
USP3-208ENST00000558285 RAP1BP61224 184 aa7.6□□□□□ -1.19
USP3-208ENST00000558285 RPS23P62266 143 aaKnown RBP7.6□□□□□ -1.19
USP3-208ENST00000558285 RAP1AP62834 184 aa7.6□□□□□ -1.19
USP3-208ENST00000558285 TSC22D1Q15714 1073 aa7.6□□□□□ -1.19
USP3-208ENST00000558285 ZNF181Q2M3W8 571 aa7.6□□□□□ -1.19
USP3-208ENST00000558285 TBRG1Q3YBR2 411 aa7.6□□□□□ -1.19
USP3-208ENST00000558285 SLC36A3Q495N2 470 aa7.6□□□□□ -1.19
USP3-208ENST00000558285 CCDC58Q4VC31 144 aa7.6□□□□□ -1.19
USP3-208ENST00000558285 MTX3Q5HYI7 312 aa7.6□□□□□ -1.19
USP3-208ENST00000558285 C9orf135Q5VTT2 229 aa7.6□□□□□ -1.19
USP3-208ENST00000558285 ZNF730Q6ZMV8 503 aa7.6□□□□□ -1.19
USP3-208ENST00000558285 ZBTB49Q6ZSB9 765 aa7.6□□□□□ -1.19
USP3-208ENST00000558285 CBLL1Q75N03 491 aa7.6□□□□□ -1.19
USP3-208ENST00000558285 SLC35D2Q76EJ3 337 aa7.6□□□□□ -1.19
USP3-208ENST00000558285 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.6□□□□□ -1.19
USP3-208ENST00000558285 LURAP1LQ8IV03 231 aa7.6□□□□□ -1.19
USP3-208ENST00000558285 OFCC1Q8IZS5 231 aa7.6□□□□□ -1.19
USP3-208ENST00000558285 ZIC4Q8N9L1 334 aa7.6□□□□□ -1.19
USP3-208ENST00000558285 SLC25A44Q96H78 314 aaPredicted RBP7.6□□□□□ -1.19
USP3-208ENST00000558285 OR2M2Q96R28 347 aa7.6□□□□□ -1.19
USP3-208ENST00000558285 C9orf16Q9BUW7 83 aa7.6□□□□□ -1.19
USP3-208ENST00000558285 ZNF426Q9BUY5 554 aa7.6□□□□□ -1.19
USP3-208ENST00000558285 TRIM15Q9C019 465 aa7.6□□□□□ -1.19
USP3-208ENST00000558285 CRLF2Q9HC73 371 aa7.6□□□□□ -1.19
USP3-208ENST00000558285 CMTM6Q9NX76 183 aa7.6□□□□□ -1.19
USP3-208ENST00000558285 ABCD2Q9UBJ2 740 aa7.6□□□□□ -1.19
USP3-208ENST00000558285 ATP23Q9Y6H3 246 aa7.6□□□□□ -1.19
USP3-208ENST00000558285 ITPR2Q14571 2701 aa7.59□□□□□ -1.19
USP3-208ENST00000558285 NPIPB13A6NJU9 1138 aa7.59□□□□□ -1.19
USP3-208ENST00000558285 SNTNA6NMZ2 147 aa7.59□□□□□ -1.19
USP3-208ENST00000558285 FAM25EA8MYX2 175 aa7.59□□□□□ -1.19
USP3-208ENST00000558285 NPIPB4C9JG80 1138 aa7.59□□□□□ -1.19
USP3-208ENST00000558285 C11orf98E9PRG8 122 aa7.59□□□□□ -1.19
USP3-208ENST00000558285 H0YAE9 185 aa7.59□□□□□ -1.19
USP3-208ENST00000558285 M0R3G1 203 aa7.59□□□□□ -1.19
USP3-208ENST00000558285 OR7A10O76100 309 aa7.59□□□□□ -1.19
USP3-208ENST00000558285 TRAPPC2P0DI81 140 aa7.59□□□□□ -1.19
USP3-208ENST00000558285 TRAPPC2BP0DI82 140 aa7.59□□□□□ -1.19
USP3-208ENST00000558285 PAX1P15863 534 aa7.59□□□□□ -1.19
USP3-208ENST00000558285 KLK2P20151 261 aa7.59□□□□□ -1.19
USP3-208ENST00000558285 OPRL1P41146 370 aa7.59□□□□□ -1.19
USP3-208ENST00000558285 FABP6P51161 128 aa7.59□□□□□ -1.19
USP3-208ENST00000558285 P2RY4P51582 365 aa7.59□□□□□ -1.19
USP3-208ENST00000558285 DSCR9P59020 149 aa7.59□□□□□ -1.19
USP3-208ENST00000558285 SNRPD2P62316 118 aaKnown RBP7.59□□□□□ -1.19
USP3-208ENST00000558285 PPP2R2BQ00005 443 aa7.59□□□□□ -1.19
USP3-208ENST00000558285 GALK2Q01415 458 aa7.59□□□□□ -1.19
USP3-208ENST00000558285 CD300CQ08708 224 aa7.59□□□□□ -1.19
USP3-208ENST00000558285 TRIM25Q14258 630 aaKnown RBP7.59□□□□□ -1.19
USP3-208ENST00000558285 CDK10Q15131 360 aa7.59□□□□□ -1.19
USP3-208ENST00000558285 TESK1Q15569 626 aa7.59□□□□□ -1.19
USP3-208ENST00000558285 SLC36A2Q495M3 483 aa7.59□□□□□ -1.19
USP3-208ENST00000558285 NRN1LQ496H8 165 aa7.59□□□□□ -1.19
USP3-208ENST00000558285 Q5PR19 223 aa7.59□□□□□ -1.19
USP3-208ENST00000558285 GLYATQ6IB77 296 aa7.59□□□□□ -1.19
USP3-208ENST00000558285 KCTD8Q6ZWB6 473 aa7.59□□□□□ -1.19
USP3-208ENST00000558285 PIWIL3Q7Z3Z3 882 aaKnown RBP7.59□□□□□ -1.19
USP3-208ENST00000558285 C20orf196Q8IYI0 205 aa7.59□□□□□ -1.19
USP3-208ENST00000558285 ACOT11Q8WXI4 607 aaPredicted RBP7.59□□□□□ -1.19
USP3-208ENST00000558285 NRGNQ92686 78 aa7.59□□□□□ -1.19
USP3-208ENST00000558285 HSH2DQ96JZ2 352 aa7.59□□□□□ -1.19
USP3-208ENST00000558285 NSMCE2Q96MF7 247 aa7.59□□□□□ -1.19
USP3-208ENST00000558285 SLC38A2Q96QD8 506 aa7.59□□□□□ -1.19
USP3-208ENST00000558285 RBP7Q96R05 134 aa7.59□□□□□ -1.19
USP3-208ENST00000558285 CDRT15Q96T59 188 aa7.59□□□□□ -1.19
USP3-208ENST00000558285 ADI1Q9BV57 179 aa7.59□□□□□ -1.19
USP3-208ENST00000558285 GORASP2Q9H8Y8 452 aa7.59□□□□□ -1.19
USP3-208ENST00000558285 GPR35Q9HC97 309 aa7.59□□□□□ -1.19
USP3-208ENST00000558285 NUP50Q9UKX7 468 aa7.59□□□□□ -1.19
USP3-208ENST00000558285 TMCC3Q9ULS5 477 aa7.59□□□□□ -1.19
USP3-208ENST00000558285 LAMP3Q9UQV4 416 aa7.59□□□□□ -1.19
USP3-208ENST00000558285 SLC22A23A1A5C7 686 aa7.58□□□□□ -1.2
USP3-208ENST00000558285 SLC35F4A4IF30 521 aa7.58□□□□□ -1.2
USP3-208ENST00000558285 EFCAB9A8MZ26 197 aa7.58□□□□□ -1.2
USP3-208ENST00000558285 NME4O00746 187 aa7.58□□□□□ -1.2
USP3-208ENST00000558285 XKRYO14609 159 aa7.58□□□□□ -1.2
USP3-208ENST00000558285 TRAF3IP2O43734 574 aaPredicted RBP7.58□□□□□ -1.2
USP3-208ENST00000558285 TPST2O60704 377 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms