RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 PYCR1P32322 319 aa18.63■□□□□ 0.57
CASC4-204ENST00000557945 CAPZA2P47755 286 aa18.63■□□□□ 0.57
CASC4-204ENST00000557945 PLBD1Q6P4A8 553 aa18.63■□□□□ 0.57
CASC4-204ENST00000557945 P2RY8Q86VZ1 359 aa18.63■□□□□ 0.57
CASC4-204ENST00000557945 GLB1L2Q8IW92 636 aa18.63■□□□□ 0.57
CASC4-204ENST00000557945 DMRTC2Q8IXT2 367 aaPredicted RBP18.63■□□□□ 0.57
CASC4-204ENST00000557945 SLC22A24Q8N4F4 322 aa18.63■□□□□ 0.57
CASC4-204ENST00000557945 ZNF555Q8NEP9 628 aa18.63■□□□□ 0.57
CASC4-204ENST00000557945 PROKR2Q8NFJ6 384 aa18.63■□□□□ 0.57
CASC4-204ENST00000557945 HSD17B8Q92506 261 aa18.63■□□□□ 0.57
CASC4-204ENST00000557945 NELFAQ9H3P2 528 aa18.63■□□□□ 0.57
CASC4-204ENST00000557945 FKBP7Q9Y680 259 aa18.63■□□□□ 0.57
CASC4-204ENST00000557945 ICE1Q9Y2F5 2266 aa18.63■□□□□ 0.57
CASC4-204ENST00000557945 IGLV1-36A0A0B4J1U3 117 aa18.62■□□□□ 0.57
CASC4-204ENST00000557945 DLGAP1O14490 977 aa18.62■□□□□ 0.57
CASC4-204ENST00000557945 PRKYO43930 277 aa18.62■□□□□ 0.57
CASC4-204ENST00000557945 GYPBP06028 91 aa18.62■□□□□ 0.57
CASC4-204ENST00000557945 OR8G3PP0DMU2 310 aa18.62■□□□□ 0.57
CASC4-204ENST00000557945 CLUP10909 449 aa18.62■□□□□ 0.57
CASC4-204ENST00000557945 IGFBP2P18065 325 aa18.62■□□□□ 0.57
CASC4-204ENST00000557945 NPR2P20594 1047 aa18.62■□□□□ 0.57
CASC4-204ENST00000557945 LAP3P28838 519 aa18.62■□□□□ 0.57
CASC4-204ENST00000557945 SLC25A1P53007 311 aa18.62■□□□□ 0.57
CASC4-204ENST00000557945 CDC42P60953 191 aa18.62■□□□□ 0.57
CASC4-204ENST00000557945 MRPS34P82930 218 aaKnown RBP18.62■□□□□ 0.57
CASC4-204ENST00000557945 TAB1Q15750 504 aa18.62■□□□□ 0.57
CASC4-204ENST00000557945 SP5Q6BEB4 398 aaPredicted RBP18.62■□□□□ 0.57
CASC4-204ENST00000557945 C22orf34Q6ZV56 151 aa18.62■□□□□ 0.57
CASC4-204ENST00000557945 ZNF627Q7L945 461 aa18.62■□□□□ 0.57
CASC4-204ENST00000557945 WFDC8Q8IUA0 241 aa18.62■□□□□ 0.57
CASC4-204ENST00000557945 CPOQ8IVL8 374 aa18.62■□□□□ 0.57
CASC4-204ENST00000557945 TCEANCQ8N8B7 351 aa18.62■□□□□ 0.57
CASC4-204ENST00000557945 WDR31Q8NA23 367 aa18.62■□□□□ 0.57
CASC4-204ENST00000557945 OR51L1Q8NGJ5 315 aa18.62■□□□□ 0.57
CASC4-204ENST00000557945 VCX3BQ9H321 246 aa18.62■□□□□ 0.57
CASC4-204ENST00000557945 FAM118AQ9NWS6 357 aa18.62■□□□□ 0.57
CASC4-204ENST00000557945 IMPAD1Q9NX62 359 aa18.62■□□□□ 0.57
CASC4-204ENST00000557945 PLEKHB1Q9UF11 243 aaPredicted RBP18.62■□□□□ 0.57
CASC4-204ENST00000557945 GMPPBQ9Y5P6 360 aa18.62■□□□□ 0.57
CASC4-204ENST00000557945 TLX2O43763 284 aaPredicted RBP18.61■□□□□ 0.57
CASC4-204ENST00000557945 HLA-DQA2P01906 255 aa18.61■□□□□ 0.57
CASC4-204ENST00000557945 SPI1P17947 270 aa18.61■□□□□ 0.57
CASC4-204ENST00000557945 GGT2P36268 569 aa18.61■□□□□ 0.57
CASC4-204ENST00000557945 TUBA1BP68363 451 aa18.61■□□□□ 0.57
CASC4-204ENST00000557945 TUBA4AP68366 448 aa18.61■□□□□ 0.57
CASC4-204ENST00000557945 PPA1Q15181 289 aa18.61■□□□□ 0.57
CASC4-204ENST00000557945 TUBA1AQ71U36 451 aa18.61■□□□□ 0.57
CASC4-204ENST00000557945 CXXC5Q7LFL8 322 aaKnown RBP18.61■□□□□ 0.57
CASC4-204ENST00000557945 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.61■□□□□ 0.57
CASC4-204ENST00000557945 ZBTB46Q86UZ6 589 aa18.61■□□□□ 0.57
CASC4-204ENST00000557945 LRRC18Q8N456 261 aa18.61■□□□□ 0.57
CASC4-204ENST00000557945 FAM81AQ8TBF8 368 aa18.61■□□□□ 0.57
CASC4-204ENST00000557945 PTP4A1Q93096 173 aa18.61■□□□□ 0.57
CASC4-204ENST00000557945 BOD1Q96IK1 185 aa18.61■□□□□ 0.57
CASC4-204ENST00000557945 HRASLS5Q96KN8 279 aa18.61■□□□□ 0.57
CASC4-204ENST00000557945 DACH2Q96NX9 599 aa18.61■□□□□ 0.57
CASC4-204ENST00000557945 IL4I1Q96RQ9 567 aa18.61■□□□□ 0.57
CASC4-204ENST00000557945 SH3GL3Q99963 347 aa18.61■□□□□ 0.57
CASC4-204ENST00000557945 HCAR1Q9BXC0 346 aa18.61■□□□□ 0.57
CASC4-204ENST00000557945 NMNAT2Q9BZQ4 307 aa18.61■□□□□ 0.57
CASC4-204ENST00000557945 RACGAP1Q9H0H5 632 aa18.61■□□□□ 0.57
CASC4-204ENST00000557945 OR51V1Q9H2C8 321 aa18.61■□□□□ 0.57
CASC4-204ENST00000557945 SIAEQ9HAT2 523 aa18.61■□□□□ 0.57
CASC4-204ENST00000557945 HINT3Q9NQE9 182 aaKnown RBP18.61■□□□□ 0.57
CASC4-204ENST00000557945 CRIM1Q9NZV1 1036 aa18.61■□□□□ 0.57
CASC4-204ENST00000557945 AMDHD2Q9Y303 409 aa18.61■□□□□ 0.57
CASC4-204ENST00000557945 LOC100130705A0A1B0GUX0 176 aa18.6■□□□□ 0.57
CASC4-204ENST00000557945 CASKO14936 926 aa18.6■□□□□ 0.57
CASC4-204ENST00000557945 GPANK1O95872 356 aa18.6■□□□□ 0.57
CASC4-204ENST00000557945 CD79AP11912 226 aa18.6■□□□□ 0.57
CASC4-204ENST00000557945 HOXB1P14653 301 aaPredicted RBP18.6■□□□□ 0.57
CASC4-204ENST00000557945 MSR1P21757 451 aa18.6■□□□□ 0.57
CASC4-204ENST00000557945 COL8A1P27658 744 aa18.6■□□□□ 0.57
CASC4-204ENST00000557945 PTDSS1P48651 473 aaKnown RBP18.6■□□□□ 0.57
CASC4-204ENST00000557945 GLO1Q04760 184 aa18.6■□□□□ 0.57
CASC4-204ENST00000557945 NRN1LQ496H8 165 aa18.6■□□□□ 0.57
CASC4-204ENST00000557945 FBXW10Q5XX13 1052 aa18.6■□□□□ 0.57
CASC4-204ENST00000557945 FOXL2NBQ6ZUU3 175 aa18.6■□□□□ 0.57
CASC4-204ENST00000557945 SLC16A14Q7RTX9 510 aa18.6■□□□□ 0.57
CASC4-204ENST00000557945 SKA3Q8IX90 412 aa18.6■□□□□ 0.57
CASC4-204ENST00000557945 CYGBQ8WWM9 190 aa18.6■□□□□ 0.57
CASC4-204ENST00000557945 NANOS1Q8WY41 292 aaKnown RBP18.6■□□□□ 0.57
CASC4-204ENST00000557945 NABP1Q96AH0 204 aa18.6■□□□□ 0.57
CASC4-204ENST00000557945 SPOCK3Q9BQ16 436 aa18.6■□□□□ 0.57
CASC4-204ENST00000557945 KCNN2Q9H2S1 579 aa18.6■□□□□ 0.57
CASC4-204ENST00000557945 EMC7Q9NPA0 242 aa18.6■□□□□ 0.57
CASC4-204ENST00000557945 OBP2BQ9NPH6 170 aa18.6■□□□□ 0.57
CASC4-204ENST00000557945 POLE4Q9NR33 117 aa18.6■□□□□ 0.57
CASC4-204ENST00000557945 SLC25A15Q9Y619 301 aa18.6■□□□□ 0.57
CASC4-204ENST00000557945 USP9YO00507 2555 aaPredicted RBP18.6■□□□□ 0.57
CASC4-204ENST00000557945 MPZL1O95297 269 aa18.59■□□□□ 0.57
CASC4-204ENST00000557945 WNT11O96014 354 aa18.59■□□□□ 0.57
CASC4-204ENST00000557945 HLA-HP01893 362 aa18.59■□□□□ 0.57
CASC4-204ENST00000557945 THBDP07204 575 aa18.59■□□□□ 0.57
CASC4-204ENST00000557945 COX6B1P14854 86 aa18.59■□□□□ 0.57
CASC4-204ENST00000557945 PIGFQ07326 219 aa18.59■□□□□ 0.57
CASC4-204ENST00000557945 KLHL12Q53G59 568 aa18.59■□□□□ 0.57
CASC4-204ENST00000557945 OTPQ5XKR4 325 aa18.59■□□□□ 0.57
CASC4-204ENST00000557945 CCDC36Q8IYA8 594 aa18.59■□□□□ 0.57
CASC4-204ENST00000557945 DHRSXQ8N5I4 330 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms