RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 NELFCDQ8IXH7 590 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 ZNF440Q8IYI8 595 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 C6orf223Q8N319 242 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 LIX1Q8N485 282 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 C17orf78Q8N4C9 275 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 POM121L12Q8N7R1 296 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 ZNF557Q8N988 423 aaPredicted RBP2.39□□□□□ -2.03
TRAV28-201ENST00000557548 TTC29Q8NA56 475 aaPredicted RBP2.39□□□□□ -2.03
TRAV28-201ENST00000557548 TMEM104Q8NE00 496 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 OR5T1Q8NG75 326 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 LYPD6BQ8NI32 183 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 ZNF502Q8TBZ5 544 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 MRGPRFQ96AM1 343 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 SLC25A38Q96DW6 304 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 ASB9Q96DX5 294 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 VSIG2Q96IQ7 327 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 XPO6Q96QU8 1125 aaKnown RBP2.39□□□□□ -2.03
TRAV28-201ENST00000557548 RARRES2Q99969 163 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 SELENOSQ9BQE4 189 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 PELOQ9BRX2 385 aaKnown RBP2.39□□□□□ -2.03
TRAV28-201ENST00000557548 CNPY3Q9BT09 278 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 C9orf16Q9BUW7 83 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 HES7Q9BYE0 225 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 TM6SF2Q9BZW4 377 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 UCK2Q9BZX2 261 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 TRIM15Q9C019 465 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 RAB1BQ9H0U4 201 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 BEX1Q9HBH7 125 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 CSNK1G1Q9HCP0 422 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 DMAP1Q9NPF5 467 aaPredicted RBP2.39□□□□□ -2.03
TRAV28-201ENST00000557548 ZNF302Q9NR11 478 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 DYRK4Q9NR20 520 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 ADAM22Q9P0K1 906 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 KIF25Q9UIL4 384 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 ENPP5Q9UJA9 477 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 GGA2Q9UJY4 613 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 KLK13Q9UKR3 277 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 UGT2A1Q9Y4X1 527 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 GON4LQ3T8J9 2241 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 CEP170Q5SW79 1584 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 MROH7-TTC4A0A0A0MT08 1334 aa2.39□□□□□ -2.03
TRAV28-201ENST00000557548 POLA1P09884 1462 aaPredicted RBP2.39□□□□□ -2.03
TRAV28-201ENST00000557548 CUL7Q14999 1698 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 TCF20Q9UGU0 1960 aaKnown RBP2.38□□□□□ -2.03
TRAV28-201ENST00000557548 IGLV8-61A0A075B6I0 122 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 IGHV3OR16-13A0A075B7E8 117 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 GOLGA8RI6L899 631 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 M0R3G1 203 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 CDC7O00311 574 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 NDUFAB1O14561 156 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 SCAMP2O15127 329 aaKnown RBP2.38□□□□□ -2.03
TRAV28-201ENST00000557548 HCRTR1O43613 425 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 TRAPPC3O43617 180 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 KDELR3O43731 214 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 NDUFS6O75380 124 aaKnown RBP2.38□□□□□ -2.03
TRAV28-201ENST00000557548 FCN3O75636 299 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 RBBP9O75884 186 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 CCNB2O95067 398 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 SERPINA5P05154 406 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 ACSM4P0C7M7 580 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 NQO2P16083 231 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 MGMTP16455 207 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 HOXB8P17481 243 aaPredicted RBP2.38□□□□□ -2.03
TRAV28-201ENST00000557548 TBPP20226 339 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 CD82P27701 267 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 FOXN2P32314 431 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 MDH2P40926 338 aaKnown RBP2.38□□□□□ -2.03
TRAV28-201ENST00000557548 PPP1R2P41236 205 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 KIR2DS4P43632 304 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 TFPI2P48307 235 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 KCNJ3P48549 501 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 UBE2MP61081 183 aaKnown RBP2.38□□□□□ -2.03
TRAV28-201ENST00000557548 PSMC5P62195 406 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 SELENOTP62341 195 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 ACTA2P62736 377 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 ACTG2P63267 376 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 ACTC1P68032 377 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 ACTA1P68133 377 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 TGFBR3Q03167 851 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 RAD51Q06609 339 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 CDH17Q12864 832 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 STX3Q13277 289 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 VAMP3Q15836 100 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 UAP1Q16222 522 aaPredicted RBP2.38□□□□□ -2.03
TRAV28-201ENST00000557548 SMUG1Q53HV7 270 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 C6orf183Q5T699 404 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 OLFML2AQ68BL7 652 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 ZNF470Q6ECI4 717 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 C11orf71Q6IPW1 123 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 CGB2Q6NT52 195 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 PPP1R2P3Q6NXS1 205 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 METTL7BQ6UX53 244 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 CERS6Q6ZMG9 384 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 MOB1BQ7L9L4 216 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 PRSS41Q7RTY9 318 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 FAM220AQ7Z4H9 259 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 ZNF589Q86UQ0 364 aaPredicted RBP2.38□□□□□ -2.03
TRAV28-201ENST00000557548 PDIK1LQ8N165 341 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 C8orf31Q8N9H6 132 aa2.38□□□□□ -2.03
TRAV28-201ENST00000557548 LRRC75AQ8NAA5 344 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms