RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 SMARCD2Q92925 531 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 CCDC126Q96EE4 140 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 ITCHQ96J02 903 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 CAPZA3Q96KX2 299 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 MAGEB18Q96M61 343 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 CCDC42Q96M95 316 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 GSDMAQ96QA5 445 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 PANX1Q96RD7 426 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 KCNA7Q96RP8 456 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 GEMIN7Q9H840 131 aaKnown RBP3.19□□□□□ -1.9
PRPF39-210ENST00000556718 SLC25A22Q9H936 323 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 ANKRA2Q9H9E1 313 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 SLC38A10Q9HBR0 1119 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 ADAP2Q9NPF8 381 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 INPP5EQ9NRR6 644 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 EXD2Q9NVH0 621 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 FAIMQ9NVQ4 179 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 FKBP14Q9NWM8 211 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 VNN3Q9NY84 501 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 ADAM22Q9P0K1 906 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 KIF25Q9UIL4 384 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 PSME2Q9UL46 239 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 SNX12Q9UMY4 172 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 FAM32AQ9Y421 112 aaKnown RBP3.19□□□□□ -1.9
PRPF39-210ENST00000556718 ADCY9O60503 1353 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 NRXN1Q9ULB1 1477 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 CEP170Q5SW79 1584 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 ADAMTS9Q9P2N4 1935 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 EFCAB6Q5THR3 1501 aa3.19□□□□□ -1.9
PRPF39-210ENST00000556718 ABCC10Q5T3U5 1492 aa3.18□□□□□ -1.9
PRPF39-210ENST00000556718 ZNF518AQ6AHZ1 1483 aa3.18□□□□□ -1.9
PRPF39-210ENST00000556718 CEMIPQ8WUJ3 1361 aa3.18□□□□□ -1.9
PRPF39-210ENST00000556718 A0A1B0GVG6 124 aa3.18□□□□□ -1.9
PRPF39-210ENST00000556718 CCDC160A6NGH7 325 aa3.18□□□□□ -1.9
PRPF39-210ENST00000556718 ZNF233A6NK53 670 aa3.18□□□□□ -1.9
PRPF39-210ENST00000556718 BBOX1O75936 387 aa3.18□□□□□ -1.9
PRPF39-210ENST00000556718 C1orf105O95561 183 aa3.18□□□□□ -1.9
PRPF39-210ENST00000556718 FGFR1OPO95684 399 aaKnown RBP3.18□□□□□ -1.9
PRPF39-210ENST00000556718 STAG3L3P0CL85 134 aa3.18□□□□□ -1.9
PRPF39-210ENST00000556718 RALBP11234 206 aa3.18□□□□□ -1.9
PRPF39-210ENST00000556718 HMOX2P30519 316 aa3.18□□□□□ -1.9
PRPF39-210ENST00000556718 FOXN2P32314 431 aa3.18□□□□□ -1.9
PRPF39-210ENST00000556718 RORAP35398 523 aa3.18□□□□□ -1.9
PRPF39-210ENST00000556718 NAA10P41227 235 aaPredicted RBP3.18□□□□□ -1.9
PRPF39-210ENST00000556718 RPL5P46777 297 aaKnown RBP3.18□□□□□ -1.9
PRPF39-210ENST00000556718 RAB10P61026 200 aa3.18□□□□□ -1.9
PRPF39-210ENST00000556718 TGFBR3Q03167 851 aa3.18□□□□□ -1.9
PRPF39-210ENST00000556718 EGFEM1PQ0D2K5 195 aa3.18□□□□□ -1.9
PRPF39-210ENST00000556718 MED21Q13503 144 aa3.18□□□□□ -1.9
PRPF39-210ENST00000556718 SPCS2Q15005 226 aa3.18□□□□□ -1.9
PRPF39-210ENST00000556718 BCL2A1Q16548 175 aa3.18□□□□□ -1.9
PRPF39-210ENST00000556718 C1orf100Q5SVJ3 147 aa3.18□□□□□ -1.9
PRPF39-210ENST00000556718 TWF2Q6IBS0 349 aaKnown RBP3.18□□□□□ -1.9
PRPF39-210ENST00000556718 FAM173BQ6P4H8 233 aa3.18□□□□□ -1.9
PRPF39-210ENST00000556718 TRIM40Q6P9F5 258 aa3.18□□□□□ -1.9
PRPF39-210ENST00000556718 TMCO2Q7Z6W1 182 aaPredicted RBP3.18□□□□□ -1.9
PRPF39-210ENST00000556718 LIX1Q8N485 282 aa3.18□□□□□ -1.9
PRPF39-210ENST00000556718 C14orf178Q8N769 122 aaPredicted RBP3.18□□□□□ -1.9
PRPF39-210ENST00000556718 LINC00301Q8NCQ3 95 aa3.18□□□□□ -1.9
PRPF39-210ENST00000556718 BPIFCQ8NFQ6 507 aa3.18□□□□□ -1.9
PRPF39-210ENST00000556718 OR4A4PQ8NGN8 299 aa3.18□□□□□ -1.9
PRPF39-210ENST00000556718 MRAPQ8TCY5 172 aa3.18□□□□□ -1.9
PRPF39-210ENST00000556718 GIMAP1Q8WWP7 306 aa3.18□□□□□ -1.9
PRPF39-210ENST00000556718 UCN3Q969E3 161 aa3.18□□□□□ -1.9
PRPF39-210ENST00000556718 MS4A4EQ96PG1 132 aa3.18□□□□□ -1.9
PRPF39-210ENST00000556718 TSG101Q99816 390 aa3.18□□□□□ -1.9
PRPF39-210ENST00000556718 ARHGDIGQ99819 225 aa3.18□□□□□ -1.9
PRPF39-210ENST00000556718 SPZ1Q9BXG8 430 aa3.18□□□□□ -1.9
PRPF39-210ENST00000556718 HES7Q9BYE0 225 aa3.18□□□□□ -1.9
PRPF39-210ENST00000556718 ROGDIQ9GZN7 287 aa3.18□□□□□ -1.9
PRPF39-210ENST00000556718 RNF167Q9H6Y7 350 aa3.18□□□□□ -1.9
PRPF39-210ENST00000556718 AUNIPQ9H7T9 357 aa3.18□□□□□ -1.9
PRPF39-210ENST00000556718 CD209Q9NNX6 404 aa3.18□□□□□ -1.9
PRPF39-210ENST00000556718 DIABLOQ9NR28 239 aa3.18□□□□□ -1.9
PRPF39-210ENST00000556718 SAR1AQ9NR31 198 aa3.18□□□□□ -1.9
PRPF39-210ENST00000556718 FGFR1OP2Q9NVK5 253 aa3.18□□□□□ -1.9
PRPF39-210ENST00000556718 AIG1Q9NVV5 245 aa3.18□□□□□ -1.9
PRPF39-210ENST00000556718 MRPL22Q9NWU5 206 aaKnown RBP3.18□□□□□ -1.9
PRPF39-210ENST00000556718 NKIRAS1Q9NYS0 192 aa3.18□□□□□ -1.9
PRPF39-210ENST00000556718 Q9UF83 564 aa3.18□□□□□ -1.9
PRPF39-210ENST00000556718 ATPIF1Q9UII2 106 aa3.18□□□□□ -1.9
PRPF39-210ENST00000556718 MOKQ9UQ07 419 aa3.18□□□□□ -1.9
PRPF39-210ENST00000556718 VSIG4Q9Y279 399 aa3.18□□□□□ -1.9
PRPF39-210ENST00000556718 OVOS2A0A0G2JMS6 1433 aa3.18□□□□□ -1.9
PRPF39-210ENST00000556718 OVOS2A0A0J9YW53 1432 aa3.18□□□□□ -1.9
PRPF39-210ENST00000556718 OVOS2Q6IE36 1432 aa3.18□□□□□ -1.9
PRPF39-210ENST00000556718 MROH7Q68CQ1 1323 aa3.18□□□□□ -1.9
PRPF39-210ENST00000556718 MAP3K15Q6ZN16 1313 aa3.18□□□□□ -1.9
PRPF39-210ENST00000556718 ADGBQ8N7X0 1667 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 IQGAP2Q13576 1575 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 JCADQ9P266 1359 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 PLEKHG1Q9ULL1 1385 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 KLF18A0A0U1RQI7 1052 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 PVALEFA0A1B0GWK0 134 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 A0A1W2PQ72 361 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 FAM168BA1KXE4 195 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 RBMY1BA6NDE4 496 aaKnown RBP3.17□□□□□ -1.9
PRPF39-210ENST00000556718 RBMY1EA6NEQ0 496 aaKnown RBP3.17□□□□□ -1.9
PRPF39-210ENST00000556718 SMCO2A6NFE2 343 aa3.17□□□□□ -1.9
PRPF39-210ENST00000556718 GOLGA8MH3BSY2 632 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms