RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-223ENST00000556689 TAS2R5Q9NYW4 299 aa10.73□□□□□ -0.69
SHMT2-223ENST00000556689 ZNF69Q9UC07 566 aa10.73□□□□□ -0.69
SHMT2-223ENST00000556689 SLC13A4Q9UKG4 626 aa10.73□□□□□ -0.69
SHMT2-223ENST00000556689 ARL2BPQ9Y2Y0 163 aa10.73□□□□□ -0.69
SHMT2-223ENST00000556689 AUP1Q9Y679 476 aa10.73□□□□□ -0.69
SHMT2-223ENST00000556689 A0A0G2JK05 382 aa10.72□□□□□ -0.69
SHMT2-223ENST00000556689 PLSCR5A0PG75 271 aa10.72□□□□□ -0.69
SHMT2-223ENST00000556689 RNF13O43567 381 aa10.72□□□□□ -0.69
SHMT2-223ENST00000556689 MGRN1O60291 552 aa10.72□□□□□ -0.69
SHMT2-223ENST00000556689 TPST2O60704 377 aa10.72□□□□□ -0.69
SHMT2-223ENST00000556689 IGHV1-46P01743 117 aa10.72□□□□□ -0.69
SHMT2-223ENST00000556689 CCNOP22674 350 aa10.72□□□□□ -0.69
SHMT2-223ENST00000556689 GCH1P30793 250 aa10.72□□□□□ -0.69
SHMT2-223ENST00000556689 APLNRP35414 380 aa10.72□□□□□ -0.69
SHMT2-223ENST00000556689 RGS8P57771 180 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-223ENST00000556689 CDK6Q00534 326 aa10.72□□□□□ -0.69
SHMT2-223ENST00000556689 NRN1LQ496H8 165 aa10.72□□□□□ -0.69
SHMT2-223ENST00000556689 GCNT6Q5T4J0 391 aa10.72□□□□□ -0.69
SHMT2-223ENST00000556689 SWT1Q5T5J6 900 aaKnown RBP10.72□□□□□ -0.69
SHMT2-223ENST00000556689 SLC2A7Q6PXP3 512 aa10.72□□□□□ -0.69
SHMT2-223ENST00000556689 RANBP3LQ86VV4 465 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-223ENST00000556689 BCL6BQ8N143 479 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-223ENST00000556689 BHLHE22Q8NFJ8 381 aaPredicted RBP10.72□□□□□ -0.69
SHMT2-223ENST00000556689 CCDC28BQ9BUN5 200 aa10.72□□□□□ -0.69
SHMT2-223ENST00000556689 SLITRK2Q9H156 845 aa10.72□□□□□ -0.69
SHMT2-223ENST00000556689 EVA1AQ9H8M9 152 aa10.72□□□□□ -0.69
SHMT2-223ENST00000556689 MMP26Q9NRE1 261 aa10.72□□□□□ -0.69
SHMT2-223ENST00000556689 EIF3KQ9UBQ5 218 aaKnown RBP10.72□□□□□ -0.69
SHMT2-223ENST00000556689 PURGQ9UJV8 347 aaKnown RBP10.72□□□□□ -0.69
SHMT2-223ENST00000556689 SNX3O60493 162 aa10.71□□□□□ -0.69
SHMT2-223ENST00000556689 CCDC22O60826 627 aa10.71□□□□□ -0.69
SHMT2-223ENST00000556689 SERPINB7O75635 380 aa10.71□□□□□ -0.69
SHMT2-223ENST00000556689 HIST1H2ABP04908 130 aa10.71□□□□□ -0.69
SHMT2-223ENST00000556689 RNASE1P07998 156 aaKnown RBP10.71□□□□□ -0.69
SHMT2-223ENST00000556689 SBK2P0C263 348 aa10.71□□□□□ -0.69
SHMT2-223ENST00000556689 PGA4P0DJD7 388 aa10.71□□□□□ -0.69
SHMT2-223ENST00000556689 PGA3P0DJD8 388 aa10.71□□□□□ -0.69
SHMT2-223ENST00000556689 LIPAP38571 399 aa10.71□□□□□ -0.69
SHMT2-223ENST00000556689 MMP15P51511 669 aa10.71□□□□□ -0.69
SHMT2-223ENST00000556689 ZNF84P51523 738 aa10.71□□□□□ -0.69
SHMT2-223ENST00000556689 HSF2Q03933 536 aa10.71□□□□□ -0.69
SHMT2-223ENST00000556689 GABPB1Q06547 395 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-223ENST00000556689 ZNF154Q13106 437 aa10.71□□□□□ -0.69
SHMT2-223ENST00000556689 MELKQ14680 651 aa10.71□□□□□ -0.69
SHMT2-223ENST00000556689 THEM4Q5T1C6 240 aa10.71□□□□□ -0.69
SHMT2-223ENST00000556689 EPGNQ6UW88 154 aa10.71□□□□□ -0.69
SHMT2-223ENST00000556689 UNQ6126/PRO20091Q6UXV3 157 aa10.71□□□□□ -0.69
SHMT2-223ENST00000556689 LINC00114Q6XXX2 140 aa10.71□□□□□ -0.69
SHMT2-223ENST00000556689 HIST3H2AQ7L7L0 130 aa10.71□□□□□ -0.69
SHMT2-223ENST00000556689 LRRC18Q8N456 261 aa10.71□□□□□ -0.69
SHMT2-223ENST00000556689 DEFB108BQ8NET1 73 aa10.71□□□□□ -0.69
SHMT2-223ENST00000556689 OR9I1Q8NGQ6 314 aa10.71□□□□□ -0.69
SHMT2-223ENST00000556689 HIST1H2ACQ93077 130 aa10.71□□□□□ -0.69
SHMT2-223ENST00000556689 MCHR2Q969V1 340 aa10.71□□□□□ -0.69
SHMT2-223ENST00000556689 MAELQ96JY0 434 aaKnown RBP10.71□□□□□ -0.69
SHMT2-223ENST00000556689 C1orf147Q96MC9 270 aaPredicted RBP10.71□□□□□ -0.69
SHMT2-223ENST00000556689 ZNF607Q96SK3 696 aa10.71□□□□□ -0.69
SHMT2-223ENST00000556689 WFDC6Q9BQY6 131 aa10.71□□□□□ -0.69
SHMT2-223ENST00000556689 MRI1Q9BV20 369 aa10.71□□□□□ -0.69
SHMT2-223ENST00000556689 KCNN2Q9H2S1 579 aa10.71□□□□□ -0.69
SHMT2-223ENST00000556689 RABEP2Q9H5N1 569 aa10.71□□□□□ -0.69
SHMT2-223ENST00000556689 NANSQ9NR45 359 aa10.71□□□□□ -0.69
SHMT2-223ENST00000556689 CYSLTR2Q9NS75 346 aa10.71□□□□□ -0.69
SHMT2-223ENST00000556689 EGFL7Q9UHF1 273 aa10.71□□□□□ -0.69
SHMT2-223ENST00000556689 TGP01266 2768 aa10.7□□□□□ -0.7
SHMT2-223ENST00000556689 TRAPPC2LH3BP13 241 aa10.7□□□□□ -0.7
SHMT2-223ENST00000556689 CLDN34H7C241 214 aa10.7□□□□□ -0.7
SHMT2-223ENST00000556689 UBDO15205 165 aa10.7□□□□□ -0.7
SHMT2-223ENST00000556689 CH25HO95992 272 aa10.7□□□□□ -0.7
SHMT2-223ENST00000556689 IGHG1P01857 330 aa10.7□□□□□ -0.7
SHMT2-223ENST00000556689 SLC6A2P23975 617 aa10.7□□□□□ -0.7
SHMT2-223ENST00000556689 STOMP27105 288 aa10.7□□□□□ -0.7
SHMT2-223ENST00000556689 IDH3AP50213 366 aa10.7□□□□□ -0.7
SHMT2-223ENST00000556689 CLRN1P58418 232 aa10.7□□□□□ -0.7
SHMT2-223ENST00000556689 ZNF74Q16587 644 aa10.7□□□□□ -0.7
SHMT2-223ENST00000556689 OCLNQ16625 522 aa10.7□□□□□ -0.7
SHMT2-223ENST00000556689 PABPC1L2AQ5JQF8 200 aa10.7□□□□□ -0.7
SHMT2-223ENST00000556689 KLF17Q5JT82 389 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-223ENST00000556689 METTL21CQ5VZV1 264 aa10.7□□□□□ -0.7
SHMT2-223ENST00000556689 ZNF613Q6PF04 617 aa10.7□□□□□ -0.7
SHMT2-223ENST00000556689 C1orf174Q8IYL3 243 aa10.7□□□□□ -0.7
SHMT2-223ENST00000556689 HIPK4Q8NE63 616 aa10.7□□□□□ -0.7
SHMT2-223ENST00000556689 MARS2Q96GW9 593 aaKnown RBP10.7□□□□□ -0.7
SHMT2-223ENST00000556689 ZNF48Q96MX3 618 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-223ENST00000556689 DIRC2Q96SL1 478 aa10.7□□□□□ -0.7
SHMT2-223ENST00000556689 MCHR1Q99705 422 aa10.7□□□□□ -0.7
SHMT2-223ENST00000556689 MS4A7Q9GZW8 240 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-223ENST00000556689 ZDHHC8Q9ULC8 765 aa10.7□□□□□ -0.7
SHMT2-223ENST00000556689 POLR3KQ9Y2Y1 108 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-223ENST00000556689 NPTNQ9Y639 398 aa10.7□□□□□ -0.7
SHMT2-223ENST00000556689 CHP2O43745 196 aa10.69□□□□□ -0.7
SHMT2-223ENST00000556689 FMO6PO60774 539 aa10.69□□□□□ -0.7
SHMT2-223ENST00000556689 IGHMP01871 453 aa10.69□□□□□ -0.7
SHMT2-223ENST00000556689 ADH4P08319 380 aa10.69□□□□□ -0.7
SHMT2-223ENST00000556689 MMP7P09237 267 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-223ENST00000556689 ZNF12P17014 697 aa10.69□□□□□ -0.7
SHMT2-223ENST00000556689 HOXB9P17482 250 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-223ENST00000556689 PPIBP23284 216 aaKnown RBP10.69□□□□□ -0.7
SHMT2-223ENST00000556689 MPV17P39210 176 aa10.69□□□□□ -0.7
SHMT2-223ENST00000556689 SLC6A9P48067 706 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms