RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 S100A12P80511 92 aa13.71□□□□□ -0.21
ARHGEF40-207ENST00000556399 CAMK2BQ13554 666 aa13.71□□□□□ -0.21
ARHGEF40-207ENST00000556399 ZXDCQ2QGD7 858 aaPredicted RBP13.71□□□□□ -0.21
ARHGEF40-207ENST00000556399 PHF19Q5T6S3 580 aa13.71□□□□□ -0.21
ARHGEF40-207ENST00000556399 ZNF687Q8N1G0 1237 aa13.71□□□□□ -0.21
ARHGEF40-207ENST00000556399 RCBTB1Q8NDN9 531 aa13.71□□□□□ -0.21
ARHGEF40-207ENST00000556399 OR2G2Q8NGZ5 317 aa13.71□□□□□ -0.21
ARHGEF40-207ENST00000556399 TTC9Q92623 222 aa13.71□□□□□ -0.21
ARHGEF40-207ENST00000556399 TCTN2Q96GX1 697 aa13.71□□□□□ -0.21
ARHGEF40-207ENST00000556399 ZNF629Q9UEG4 869 aaPredicted RBP13.71□□□□□ -0.21
ARHGEF40-207ENST00000556399 ING1Q9UK53 422 aaPredicted RBP13.71□□□□□ -0.21
ARHGEF40-207ENST00000556399 MRPS28Q9Y2Q9 187 aaKnown RBP13.71□□□□□ -0.21
ARHGEF40-207ENST00000556399 TAS2R46P59540 309 aa13.71□□□□□ -0.21
ARHGEF40-207ENST00000556399 RPL18Q07020 188 aaKnown RBP13.71□□□□□ -0.21
ARHGEF40-207ENST00000556399 PLA1AQ53H76 456 aa13.71□□□□□ -0.21
ARHGEF40-207ENST00000556399 ELFN2Q5R3F8 820 aa13.71□□□□□ -0.21
ARHGEF40-207ENST00000556399 RAET1LQ5VY80 246 aa13.71□□□□□ -0.21
ARHGEF40-207ENST00000556399 DCXRQ7Z4W1 244 aa13.71□□□□□ -0.21
ARHGEF40-207ENST00000556399 TMEM200AQ86VY9 491 aa13.71□□□□□ -0.21
ARHGEF40-207ENST00000556399 PLXDC1Q8IUK5 500 aa13.71□□□□□ -0.21
ARHGEF40-207ENST00000556399 OR56B1Q8NGI3 324 aa13.71□□□□□ -0.21
ARHGEF40-207ENST00000556399 SHDQ96IW2 340 aa13.71□□□□□ -0.21
ARHGEF40-207ENST00000556399 ACAD8Q9UKU7 415 aa13.71□□□□□ -0.21
ARHGEF40-207ENST00000556399 ZNF346Q9UL40 294 aaKnown RBP13.71□□□□□ -0.21
ARHGEF40-207ENST00000556399 A0A0B4J2E0 115 aa13.71□□□□□ -0.22
ARHGEF40-207ENST00000556399 A0A1B0GX12 115 aa13.71□□□□□ -0.22
ARHGEF40-207ENST00000556399 LINC00862A6NCI5 91 aa13.71□□□□□ -0.22
ARHGEF40-207ENST00000556399 NPY4RP50391 375 aa13.71□□□□□ -0.22
ARHGEF40-207ENST00000556399 YPEL5P62699 121 aa13.71□□□□□ -0.22
ARHGEF40-207ENST00000556399 OTPQ5XKR4 325 aa13.71□□□□□ -0.22
ARHGEF40-207ENST00000556399 MDGA2Q7Z553 956 aa13.71□□□□□ -0.22
ARHGEF40-207ENST00000556399 OR4D9Q8NGE8 314 aa13.71□□□□□ -0.22
ARHGEF40-207ENST00000556399 CCL4L1Q8NHW4 92 aa13.71□□□□□ -0.22
ARHGEF40-207ENST00000556399 TCEAL7Q9BRU2 100 aa13.71□□□□□ -0.22
ARHGEF40-207ENST00000556399 SEMA6CQ9H3T2 930 aa13.71□□□□□ -0.22
ARHGEF40-207ENST00000556399 C1orf198Q9H425 327 aa13.71□□□□□ -0.22
ARHGEF40-207ENST00000556399 C9J4A7 227 aa13.71□□□□□ -0.22
ARHGEF40-207ENST00000556399 SLC36A2Q495M3 483 aa13.71□□□□□ -0.22
ARHGEF40-207ENST00000556399 FJX1Q86VR8 437 aa13.71□□□□□ -0.22
ARHGEF40-207ENST00000556399 CA13Q8N1Q1 262 aa13.71□□□□□ -0.22
ARHGEF40-207ENST00000556399 ASB16Q96NS5 453 aa13.71□□□□□ -0.22
ARHGEF40-207ENST00000556399 RBM24Q9BX46 236 aaKnown RBP13.71□□□□□ -0.22
ARHGEF40-207ENST00000556399 TPSD1Q9BZJ3 242 aa13.71□□□□□ -0.22
ARHGEF40-207ENST00000556399 GAREM1Q9H706 876 aa13.71□□□□□ -0.22
ARHGEF40-207ENST00000556399 ABI3Q9P2A4 366 aa13.71□□□□□ -0.22
ARHGEF40-207ENST00000556399 SLC22A13Q9Y226 551 aa13.71□□□□□ -0.22
ARHGEF40-207ENST00000556399 COA3Q9Y2R0 106 aaPredicted RBP13.71□□□□□ -0.22
ARHGEF40-207ENST00000556399 PRAMEF25A6NGN4 478 aa13.7□□□□□ -0.22
ARHGEF40-207ENST00000556399 TMEM127O75204 238 aa13.7□□□□□ -0.22
ARHGEF40-207ENST00000556399 TRAPPC6AO75865 159 aa13.7□□□□□ -0.22
ARHGEF40-207ENST00000556399 RRASP10301 218 aa13.7□□□□□ -0.22
ARHGEF40-207ENST00000556399 ZNF93P35789 620 aaPredicted RBP13.7□□□□□ -0.22
ARHGEF40-207ENST00000556399 MAGEB1P43366 347 aa13.7□□□□□ -0.22
ARHGEF40-207ENST00000556399 LGALSLQ3ZCW2 172 aaPredicted RBP13.7□□□□□ -0.22
ARHGEF40-207ENST00000556399 C14orf28Q4W4Y0 310 aa13.7□□□□□ -0.22
ARHGEF40-207ENST00000556399 DMKNQ6E0U4 476 aaPredicted RBP13.7□□□□□ -0.22
ARHGEF40-207ENST00000556399 LPAR4Q99677 370 aa13.7□□□□□ -0.22
ARHGEF40-207ENST00000556399 LUZP4Q9P127 313 aa13.7□□□□□ -0.22
ARHGEF40-207ENST00000556399 CSAG2Q9Y5P2 127 aa13.7□□□□□ -0.22
ARHGEF40-207ENST00000556399 PLXNB2O15031 1838 aa13.7□□□□□ -0.22
ARHGEF40-207ENST00000556399 ZFPL1O95159 310 aa13.7□□□□□ -0.22
ARHGEF40-207ENST00000556399 SULT1A3P0DMM9 295 aa13.7□□□□□ -0.22
ARHGEF40-207ENST00000556399 SULT1A4P0DMN0 295 aa13.7□□□□□ -0.22
ARHGEF40-207ENST00000556399 ADPRHP54922 357 aa13.7□□□□□ -0.22
ARHGEF40-207ENST00000556399 RPL27P61353 136 aaKnown RBP13.7□□□□□ -0.22
ARHGEF40-207ENST00000556399 NHLRC1Q6VVB1 395 aa13.7□□□□□ -0.22
ARHGEF40-207ENST00000556399 MARCH3Q86UD3 253 aa13.7□□□□□ -0.22
ARHGEF40-207ENST00000556399 KCNG3Q8TAE7 436 aa13.7□□□□□ -0.22
ARHGEF40-207ENST00000556399 SLC22A8Q8TCC7 542 aa13.7□□□□□ -0.22
ARHGEF40-207ENST00000556399 PATE1Q8WXA2 126 aa13.7□□□□□ -0.22
ARHGEF40-207ENST00000556399 SLC46A1Q96NT5 459 aa13.7□□□□□ -0.22
ARHGEF40-207ENST00000556399 DSPPQ9NZW4 1301 aa13.7□□□□□ -0.22
ARHGEF40-207ENST00000556399 A0A1W2PS29 197 aa13.7□□□□□ -0.22
ARHGEF40-207ENST00000556399 IFNA2P01563 188 aa13.7□□□□□ -0.22
ARHGEF40-207ENST00000556399 ZNF85Q03923 595 aa13.7□□□□□ -0.22
ARHGEF40-207ENST00000556399 EGR3Q06889 387 aa13.7□□□□□ -0.22
ARHGEF40-207ENST00000556399 ZNF674Q2M3X9 581 aa13.7□□□□□ -0.22
ARHGEF40-207ENST00000556399 FAM57BQ71RH2 274 aa13.7□□□□□ -0.22
ARHGEF40-207ENST00000556399 SPICQ8N5J4 248 aa13.7□□□□□ -0.22
ARHGEF40-207ENST00000556399 CCDC71LQ8N9Z2 235 aa13.7□□□□□ -0.22
ARHGEF40-207ENST00000556399 SCMH1Q96GD3 660 aa13.7□□□□□ -0.22
ARHGEF40-207ENST00000556399 ZNF764Q96H86 408 aaPredicted RBP13.7□□□□□ -0.22
ARHGEF40-207ENST00000556399 CUTCQ9NTM9 273 aa13.7□□□□□ -0.22
ARHGEF40-207ENST00000556399 MYO16Q9Y6X6 1858 aa13.7□□□□□ -0.22
ARHGEF40-207ENST00000556399 LOC107986453A0A1B0GWG9 222 aa13.69□□□□□ -0.22
ARHGEF40-207ENST00000556399 HPXP02790 462 aa13.69□□□□□ -0.22
ARHGEF40-207ENST00000556399 DLX2Q07687 328 aaPredicted RBP13.69□□□□□ -0.22
ARHGEF40-207ENST00000556399 CAMK2DQ13557 499 aa13.69□□□□□ -0.22
ARHGEF40-207ENST00000556399 EMC4Q5J8M3 183 aa13.69□□□□□ -0.22
ARHGEF40-207ENST00000556399 AKR1C8PQ5T2L2 129 aa13.69□□□□□ -0.22
ARHGEF40-207ENST00000556399 AGBL4Q5VU57 503 aa13.69□□□□□ -0.22
ARHGEF40-207ENST00000556399 WDR88Q6ZMY6 472 aa13.69□□□□□ -0.22
ARHGEF40-207ENST00000556399 MEX3BQ6ZN04 569 aaKnown RBP13.69□□□□□ -0.22
ARHGEF40-207ENST00000556399 ANKRD33Q7Z3H0 272 aa13.69□□□□□ -0.22
ARHGEF40-207ENST00000556399 UBE3DQ7Z6J8 389 aa13.69□□□□□ -0.22
ARHGEF40-207ENST00000556399 TMED6Q8WW62 240 aa13.69□□□□□ -0.22
ARHGEF40-207ENST00000556399 FBXO34Q9NWN3 711 aa13.69□□□□□ -0.22
ARHGEF40-207ENST00000556399 KCNG2Q9UJ96 466 aa13.69□□□□□ -0.22
ARHGEF40-207ENST00000556399 IDSB3KWA1 339 aa13.69□□□□□ -0.22
ARHGEF40-207ENST00000556399 PRKNO60260 465 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms