RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 GAS2L1Q99501 681 aaPredicted RBP6.32□□□□□ -1.4
TDP1-213ENST00000555880 ULBP3Q9BZM4 244 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 ELOVL3Q9HB03 270 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 SLC2A4RGQ9NR83 387 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 LANCL2Q9NS86 450 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 CUTCQ9NTM9 273 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 ZNF224Q9NZL3 707 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 KIF25Q9UIL4 384 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 KCNG2Q9UJ96 466 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 DHDHQ9UQ10 334 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 PCDHGA5Q9Y5G8 931 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 SESN1Q9Y6P5 492 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 TNRC18O15417 2968 aaPredicted RBP6.32□□□□□ -1.4
TDP1-213ENST00000555880 GON4LQ3T8J9 2241 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 COL5A1P20908 1838 aaPredicted RBP6.32□□□□□ -1.4
TDP1-213ENST00000555880 TRAV18A0A075B6X5 111 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 IGHV5-51A0A0C4DH38 117 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 A0A1B0GTH9 108 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 A0A1W2PQD3 144 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 RPS10-NUDT3A0A1W2PQS6 291 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 PLSCR5A0PG75 271 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 PRSS37A4D1T9 235 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 C2CD4DB7Z1M9 353 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 C10orf142B7Z368 130 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 F5H5P2 479 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 G3V3Q6 166 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 H3BSH0 61 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 PYCARD-AS1I3L0S3 204 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 SLC17A2O00624 439 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 RP2O75695 350 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 RGS11O94810 467 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 BGLAPP02818 100 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 TMIGD3P0DMS9 266 aaPredicted RBP6.32□□□□□ -1.4
TDP1-213ENST00000555880 KIR3DL2P43630 455 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 GABRA4P48169 554 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 POU3F4P49335 361 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 POLR2HP52434 150 aaKnown RBP6.32□□□□□ -1.4
TDP1-213ENST00000555880 RIDAP52758 137 aaKnown RBP6.32□□□□□ -1.4
TDP1-213ENST00000555880 RPL27P61353 136 aaKnown RBP6.32□□□□□ -1.4
TDP1-213ENST00000555880 SEC61A1P61619 476 aaKnown RBP6.32□□□□□ -1.4
TDP1-213ENST00000555880 ADAM8P78325 824 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 SLC17A1Q14916 467 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 AANATQ16613 207 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 MEP1BQ16820 701 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 WDR38Q5JTN6 314 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 GLT8D1Q68CQ7 371 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 C11orf88Q6PI97 169 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 LRRC69Q6ZNQ3 347 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 DNM1P46Q6ZS02 220 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 CHMP1BQ7LBR1 199 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 SLC29A4Q7RTT9 530 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.32□□□□□ -1.4
TDP1-213ENST00000555880 ZNF321PQ8N8H1 164 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 OR51D1Q8NGF3 324 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 OR51A4Q8NGJ6 313 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 OR4C16Q8NGL9 310 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 OR6N1Q8NGY5 312 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 OR10AC1Q8NH08 325 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 CCDC107Q8WV48 283 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 DAZLQ92904 295 aaKnown RBP6.32□□□□□ -1.4
TDP1-213ENST00000555880 MVB12AQ96EY5 273 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 SFXN2Q96NB2 322 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 ELF4Q99607 663 aaPredicted RBP6.32□□□□□ -1.4
TDP1-213ENST00000555880 POTEKPQ9BYX7 375 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 CHRNA10Q9GZZ6 450 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 ATG5Q9H1Y0 275 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 EXO5Q9H790 373 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 TMEM138Q9NPI0 162 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 CA10Q9NS85 328 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 RDH8Q9NYR8 311 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 MED11Q9P086 117 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 PIPOXQ9P0Z9 390 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 KCNN3Q9UGI6 736 aa6.32□□□□□ -1.4
TDP1-213ENST00000555880 TMEM184BQ9Y519 407 aaPredicted RBP6.32□□□□□ -1.4
TDP1-213ENST00000555880 TMEM265A0A087WTH1 108 aa6.31□□□□□ -1.4
TDP1-213ENST00000555880 OR2M5A3KFT3 312 aa6.31□□□□□ -1.4
TDP1-213ENST00000555880 RHPN2P1A8MT19 583 aa6.31□□□□□ -1.4
TDP1-213ENST00000555880 A8MVM7 634 aa6.31□□□□□ -1.4
TDP1-213ENST00000555880 ALG1L2C9J202 215 aa6.31□□□□□ -1.4
TDP1-213ENST00000555880 H0YC42 278 aa6.31□□□□□ -1.4
TDP1-213ENST00000555880 SUSD5O60279 629 aa6.31□□□□□ -1.4
TDP1-213ENST00000555880 SLC16A7O60669 478 aa6.31□□□□□ -1.4
TDP1-213ENST00000555880 AHSA1O95433 338 aa6.31□□□□□ -1.4
TDP1-213ENST00000555880 DDAH2O95865 285 aa6.31□□□□□ -1.4
TDP1-213ENST00000555880 PLGP00747 810 aaPredicted RBP6.31□□□□□ -1.4
TDP1-213ENST00000555880 IGKV3-11P04433 115 aa6.31□□□□□ -1.4
TDP1-213ENST00000555880 ITGA5P08648 1049 aa6.31□□□□□ -1.4
TDP1-213ENST00000555880 NME1P15531 152 aaKnown RBP6.31□□□□□ -1.4
TDP1-213ENST00000555880 MAOBP27338 520 aa6.31□□□□□ -1.4
TDP1-213ENST00000555880 CRABP1P29762 137 aa6.31□□□□□ -1.4
TDP1-213ENST00000555880 RPS27P42677 84 aaKnown RBP6.31□□□□□ -1.4
TDP1-213ENST00000555880 GFERP55789 205 aa6.31□□□□□ -1.4
TDP1-213ENST00000555880 GLO1Q04760 184 aa6.31□□□□□ -1.4
TDP1-213ENST00000555880 ACKR1Q16570 336 aa6.31□□□□□ -1.4
TDP1-213ENST00000555880 C4orf46Q504U0 113 aa6.31□□□□□ -1.4
TDP1-213ENST00000555880 STPG1Q5TH74 334 aa6.31□□□□□ -1.4
TDP1-213ENST00000555880 C5orf46Q6UWT4 87 aa6.31□□□□□ -1.4
TDP1-213ENST00000555880 SLC35D2Q76EJ3 337 aa6.31□□□□□ -1.4
TDP1-213ENST00000555880 NDUFAF7Q7L592 441 aa6.31□□□□□ -1.4
TDP1-213ENST00000555880 MARCH3Q86UD3 253 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms