RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 A0A1W2PPL8 197 aa9.02□□□□□ -0.97
SRP54-208ENST00000555557 A0A1W2PQL4 384 aaPredicted RBP9.02□□□□□ -0.97
SRP54-208ENST00000555557 ZNF724A8MTY0 619 aa9.02□□□□□ -0.97
SRP54-208ENST00000555557 ERVH48-1M5A8F1 160 aa9.02□□□□□ -0.97
SRP54-208ENST00000555557 ZNF593O00488 134 aaPredicted RBP9.02□□□□□ -0.97
SRP54-208ENST00000555557 SLC43A1O75387 559 aa9.02□□□□□ -0.97
SRP54-208ENST00000555557 IGHA1P01876 353 aa9.02□□□□□ -0.97
SRP54-208ENST00000555557 LIMS3P0CW19 117 aa9.02□□□□□ -0.97
SRP54-208ENST00000555557 LIMS4P0CW20 117 aa9.02□□□□□ -0.97
SRP54-208ENST00000555557 ABOP16442 354 aa9.02□□□□□ -0.97
SRP54-208ENST00000555557 MYL12AP19105 171 aa9.02□□□□□ -0.97
SRP54-208ENST00000555557 RPL5P46777 297 aaKnown RBP9.02□□□□□ -0.97
SRP54-208ENST00000555557 GLO1Q04760 184 aa9.02□□□□□ -0.97
SRP54-208ENST00000555557 GTF3C1Q12789 2109 aa9.02□□□□□ -0.97
SRP54-208ENST00000555557 C1QTNF12Q5T7M4 302 aa9.02□□□□□ -0.97
SRP54-208ENST00000555557 TSPO2Q5TGU0 170 aa9.02□□□□□ -0.97
SRP54-208ENST00000555557 OR2G6Q5TZ20 316 aa9.02□□□□□ -0.97
SRP54-208ENST00000555557 RTL6Q6ICC9 239 aa9.02□□□□□ -0.97
SRP54-208ENST00000555557 DNM1P34Q6PK57 102 aa9.02□□□□□ -0.97
SRP54-208ENST00000555557 GFRALQ6UXV0 394 aa9.02□□□□□ -0.97
SRP54-208ENST00000555557 SEM1Q6ZVN7 128 aa9.02□□□□□ -0.97
SRP54-208ENST00000555557 LINGO2Q7L985 606 aa9.02□□□□□ -0.97
SRP54-208ENST00000555557 DPY19L4Q7Z388 723 aa9.02□□□□□ -0.97
SRP54-208ENST00000555557 SATL1Q86VE3 508 aa9.02□□□□□ -0.97
SRP54-208ENST00000555557 SLC35F2Q8IXU6 374 aa9.02□□□□□ -0.97
SRP54-208ENST00000555557 ACBD7Q8N6N7 88 aa9.02□□□□□ -0.97
SRP54-208ENST00000555557 OR6N2Q8NGY6 317 aa9.02□□□□□ -0.97
SRP54-208ENST00000555557 TMEM45BQ96B21 275 aa9.02□□□□□ -0.97
SRP54-208ENST00000555557 INTS12Q96CB8 462 aaKnown RBP9.02□□□□□ -0.97
SRP54-208ENST00000555557 ALKBH3Q96Q83 286 aaPredicted RBP9.02□□□□□ -0.97
SRP54-208ENST00000555557 ULBP2Q9BZM5 246 aa9.02□□□□□ -0.97
SRP54-208ENST00000555557 CRLF2Q9HC73 371 aa9.02□□□□□ -0.97
SRP54-208ENST00000555557 RCE1Q9Y256 329 aa9.02□□□□□ -0.97
SRP54-208ENST00000555557 ERGIC3Q9Y282 383 aa9.02□□□□□ -0.97
SRP54-208ENST00000555557 PCDHGB1Q9Y5G3 927 aa9.02□□□□□ -0.97
SRP54-208ENST00000555557 DAPL1A0PJW8 107 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 IRGMA1A4Y4 181 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 PSMD9O00233 223 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 AKAP8O43823 692 aaKnown RBP9.01□□□□□ -0.97
SRP54-208ENST00000555557 MRPS14O60783 128 aaKnown RBP9.01□□□□□ -0.97
SRP54-208ENST00000555557 PFDN1O60925 122 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 FCGR2AP12318 317 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 AGTR1P30556 359 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 NR1H2P55055 460 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 ADAM8P78325 824 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 ZNF85Q03923 595 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 HSF2Q03933 536 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 POU4F2Q12837 409 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 MED22Q15528 200 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 GLB1L2Q8IW92 636 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 SVOPQ8N4V2 548 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 NANOGP1Q8N7R0 232 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 POMGNT2Q8NAT1 580 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 SLC26A10Q8NG04 563 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 FAM57AQ8TBR7 257 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 C11orf40Q8WZ69 217 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 INTS14Q96SY0 518 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 SLC7A10Q9NS82 523 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 ERVK13-1Q9NX77 482 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 KLHDC2Q9Y2U9 406 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 FAM215AQ9Y5M1 114 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 ITPR1Q14643 2758 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 CENPBD1B2RD01 187 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 DHHO43323 396 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 SEC14L2O76054 403 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 TOXO94900 526 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 SPARCP09486 303 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 OR2T7P0C7T2 308 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 HSMCR30P0CW71 290 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 GAAP10253 952 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 SFTPCP11686 197 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 PSMB9P28065 219 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 LAP3P28838 519 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 ALDH3B2P48448 385 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 SIRPAP78324 504 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 FOXF2Q12947 444 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 TBCEQ15813 527 aaPredicted RBP9.01□□□□□ -0.97
SRP54-208ENST00000555557 C9orf135Q5VTT2 229 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 NSUN5P2Q63ZY6 315 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 CORO6Q6QEF8 472 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 SLC16A9Q7RTY1 509 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 LINC00346Q8IVM7 164 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 GPR137CQ8N3F9 429 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 OR2T27Q8NH04 317 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 GATAD2BQ8WXI9 593 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 PHF3Q92576 2039 aaKnown RBP9.01□□□□□ -0.97
SRP54-208ENST00000555557 RORBQ92753 470 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 WNT2BQ93097 391 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 GMPPAQ96IJ6 420 aaPredicted RBP9.01□□□□□ -0.97
SRP54-208ENST00000555557 ALG8Q9BVK2 526 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 ISG20L2Q9H9L3 353 aaKnown RBP9.01□□□□□ -0.97
SRP54-208ENST00000555557 EMC7Q9NPA0 242 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 PARPBPQ9NWS1 579 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 PRSS50Q9UI38 385 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 KCNG2Q9UJ96 466 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 SH3BGRL2Q9UJC5 107 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 EXOSC1Q9Y3B2 195 aaKnown RBP9.01□□□□□ -0.97
SRP54-208ENST00000555557 UGT2A1Q9Y4X1 527 aa9.01□□□□□ -0.97
SRP54-208ENST00000555557 SMIM31A0A1B0GVY4 71 aa9□□□□□ -0.97
SRP54-208ENST00000555557 ZNF99A8MXY4 864 aaPredicted RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms