RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 HSF1Q00613 529 aa21.76■■□□□ 1.07
TMEM260-207ENST00000555497 IFITM2Q01629 132 aa21.76■■□□□ 1.07
TMEM260-207ENST00000555497 POU3F1Q03052 451 aaPredicted RBP21.76■■□□□ 1.07
TMEM260-207ENST00000555497 ROM1Q03395 351 aa21.76■■□□□ 1.07
TMEM260-207ENST00000555497 RASGEF1BQ0VAM2 473 aa21.76■■□□□ 1.07
TMEM260-207ENST00000555497 EIF2B1Q14232 305 aaKnown RBP21.76■■□□□ 1.07
TMEM260-207ENST00000555497 HSPB2Q16082 182 aa21.76■■□□□ 1.07
TMEM260-207ENST00000555497 SLC25A53Q5H9E4 307 aa21.76■■□□□ 1.07
TMEM260-207ENST00000555497 SIAH3Q8IW03 269 aa21.76■■□□□ 1.07
TMEM260-207ENST00000555497 SLC22A8Q8TCC7 542 aa21.76■■□□□ 1.07
TMEM260-207ENST00000555497 GPR148Q8TDV2 347 aa21.76■■□□□ 1.07
TMEM260-207ENST00000555497 RNF128Q8TEB7 428 aa21.76■■□□□ 1.07
TMEM260-207ENST00000555497 TMEM106AQ96A25 262 aa21.76■■□□□ 1.07
TMEM260-207ENST00000555497 SPACA9Q96E40 222 aaPredicted RBP21.76■■□□□ 1.07
TMEM260-207ENST00000555497 CMTM3Q96MX0 182 aa21.76■■□□□ 1.07
TMEM260-207ENST00000555497 AUNIPQ9H7T9 357 aa21.76■■□□□ 1.07
TMEM260-207ENST00000555497 DDX28Q9NUL7 540 aaKnown RBP21.76■■□□□ 1.07
TMEM260-207ENST00000555497 NPIPA5E9PKD4 350 aa21.76■■□□□ 1.07
TMEM260-207ENST00000555497 INMT-MINDY4F8WBC2 141 aa21.76■■□□□ 1.07
TMEM260-207ENST00000555497 MSX1P28360 303 aa21.76■■□□□ 1.07
TMEM260-207ENST00000555497 CRABP1P29762 137 aa21.76■■□□□ 1.07
TMEM260-207ENST00000555497 PTGS2P35354 604 aa21.76■■□□□ 1.07
TMEM260-207ENST00000555497 PITPNAQ00169 270 aa21.76■■□□□ 1.07
TMEM260-207ENST00000555497 MFGE8Q08431 387 aaPredicted RBP21.76■■□□□ 1.07
TMEM260-207ENST00000555497 MFSD13AQ14CX5 517 aa21.76■■□□□ 1.07
TMEM260-207ENST00000555497 TEX30Q5JUR7 227 aa21.76■■□□□ 1.07
TMEM260-207ENST00000555497 FAM198BQ6UWH4 519 aa21.76■■□□□ 1.07
TMEM260-207ENST00000555497 AGBL5Q8NDL9 886 aa21.76■■□□□ 1.07
TMEM260-207ENST00000555497 OR2M3Q8NG83 312 aa21.76■■□□□ 1.07
TMEM260-207ENST00000555497 KCNK17Q96T54 332 aa21.76■■□□□ 1.07
TMEM260-207ENST00000555497 NPIPA1Q9UND3 350 aa21.76■■□□□ 1.07
TMEM260-207ENST00000555497 LOC102723996A0A087X1L8 192 aa21.75■■□□□ 1.07
TMEM260-207ENST00000555497 H0YC42 278 aa21.75■■□□□ 1.07
TMEM260-207ENST00000555497 CER1O95813 267 aa21.75■■□□□ 1.07
TMEM260-207ENST00000555497 MAS1P04201 325 aa21.75■■□□□ 1.07
TMEM260-207ENST00000555497 RPS15P62841 145 aaKnown RBP21.75■■□□□ 1.07
TMEM260-207ENST00000555497 CD83Q01151 205 aa21.75■■□□□ 1.07
TMEM260-207ENST00000555497 GLO1Q04760 184 aa21.75■■□□□ 1.07
TMEM260-207ENST00000555497 OR7E24Q6IFN5 339 aa21.75■■□□□ 1.07
TMEM260-207ENST00000555497 GCDHQ92947 438 aaPredicted RBP21.75■■□□□ 1.07
TMEM260-207ENST00000555497 MR1Q95460 341 aa21.75■■□□□ 1.07
TMEM260-207ENST00000555497 MCHR2Q969V1 340 aa21.75■■□□□ 1.07
TMEM260-207ENST00000555497 MRGPRX4Q96LA9 322 aa21.75■■□□□ 1.07
TMEM260-207ENST00000555497 POTEKPQ9BYX7 375 aa21.75■■□□□ 1.07
TMEM260-207ENST00000555497 SLITRK2Q9H156 845 aa21.75■■□□□ 1.07
TMEM260-207ENST00000555497 A6NIZ1 184 aa21.75■■□□□ 1.07
TMEM260-207ENST00000555497 GPR171O14626 319 aa21.75■■□□□ 1.07
TMEM260-207ENST00000555497 ORC5O43913 435 aa21.75■■□□□ 1.07
TMEM260-207ENST00000555497 ZNF432O94892 652 aa21.75■■□□□ 1.07
TMEM260-207ENST00000555497 RAP1BP61224 184 aa21.75■■□□□ 1.07
TMEM260-207ENST00000555497 RAP1AP62834 184 aa21.75■■□□□ 1.07
TMEM260-207ENST00000555497 MYBPHQ13203 477 aa21.75■■□□□ 1.07
TMEM260-207ENST00000555497 LPAL2Q16609 132 aa21.75■■□□□ 1.07
TMEM260-207ENST00000555497 ZFP69Q49AA0 526 aa21.75■■□□□ 1.07
TMEM260-207ENST00000555497 HACD4Q5VWC8 232 aa21.75■■□□□ 1.07
TMEM260-207ENST00000555497 TOMM5Q8N4H5 51 aa21.75■■□□□ 1.07
TMEM260-207ENST00000555497 SLC26A10Q8NG04 563 aa21.75■■□□□ 1.07
TMEM260-207ENST00000555497 CREB3L1Q96BA8 519 aa21.75■■□□□ 1.07
TMEM260-207ENST00000555497 TMEM185BQ9H7F4 350 aa21.75■■□□□ 1.07
TMEM260-207ENST00000555497 GSTZ1O43708 216 aaPredicted RBP21.74■■□□□ 1.07
TMEM260-207ENST00000555497 KLF7O75840 302 aaPredicted RBP21.74■■□□□ 1.07
TMEM260-207ENST00000555497 NHLRC1Q6VVB1 395 aa21.74■■□□□ 1.07
TMEM260-207ENST00000555497 KRT77Q7Z794 578 aa21.74■■□□□ 1.07
TMEM260-207ENST00000555497 DND1Q8IYX4 353 aaKnown RBP21.74■■□□□ 1.07
TMEM260-207ENST00000555497 WDSUB1Q8N9V3 476 aa21.74■■□□□ 1.07
TMEM260-207ENST00000555497 C5orf34Q96MH7 638 aa21.74■■□□□ 1.07
TMEM260-207ENST00000555497 EMC6Q9BV81 110 aa21.74■■□□□ 1.07
TMEM260-207ENST00000555497 B3GAT1Q9P2W7 334 aa21.74■■□□□ 1.07
TMEM260-207ENST00000555497 GPN3Q9UHW5 284 aaPredicted RBP21.74■■□□□ 1.07
TMEM260-207ENST00000555497 LRP12Q9Y561 859 aa21.74■■□□□ 1.07
TMEM260-207ENST00000555497 CTDSPLO15194 276 aa21.74■■□□□ 1.07
TMEM260-207ENST00000555497 ARSBP15848 533 aa21.74■■□□□ 1.07
TMEM260-207ENST00000555497 DAP3P51398 398 aaKnown RBP21.74■■□□□ 1.07
TMEM260-207ENST00000555497 PLA2G7Q13093 441 aa21.74■■□□□ 1.07
TMEM260-207ENST00000555497 BAIAP2L2Q6UXY1 529 aa21.74■■□□□ 1.07
TMEM260-207ENST00000555497 SDHAF3Q9NRP4 125 aa21.74■■□□□ 1.07
TMEM260-207ENST00000555497 ALKBH4Q9NXW9 302 aa21.74■■□□□ 1.07
TMEM260-207ENST00000555497 GTF2A1LQ9UNN4 478 aa21.74■■□□□ 1.07
TMEM260-207ENST00000555497 PTRH2Q9Y3E5 179 aaKnown RBP21.74■■□□□ 1.07
TMEM260-207ENST00000555497 CHCHD2Q9Y6H1 151 aaPredicted RBP21.74■■□□□ 1.07
TMEM260-207ENST00000555497 IGHV1-45A0A0A0MS14 117 aa21.73■■□□□ 1.07
TMEM260-207ENST00000555497 RGS13O14921 159 aa21.73■■□□□ 1.07
TMEM260-207ENST00000555497 RAF1P04049 648 aa21.73■■□□□ 1.07
TMEM260-207ENST00000555497 CYC1P08574 325 aa21.73■■□□□ 1.07
TMEM260-207ENST00000555497 CCR9P51686 369 aa21.73■■□□□ 1.07
TMEM260-207ENST00000555497 SIGLEC14Q08ET2 396 aa21.73■■□□□ 1.07
TMEM260-207ENST00000555497 CLPPQ16740 277 aaPredicted RBP21.73■■□□□ 1.07
TMEM260-207ENST00000555497 PRAMEF20Q5VT98 475 aa21.73■■□□□ 1.07
TMEM260-207ENST00000555497 ASPHD2Q6ICH7 369 aa21.73■■□□□ 1.07
TMEM260-207ENST00000555497 TMPRSS12Q86WS5 348 aa21.73■■□□□ 1.07
TMEM260-207ENST00000555497 SMIM4Q8WVI0 70 aa21.73■■□□□ 1.07
TMEM260-207ENST00000555497 CAPSLQ8WWF8 208 aa21.73■■□□□ 1.07
TMEM260-207ENST00000555497 TP63Q9H3D4 680 aaPredicted RBP21.73■■□□□ 1.07
TMEM260-207ENST00000555497 SERINC1Q9NRX5 453 aa21.73■■□□□ 1.07
TMEM260-207ENST00000555497 NXT1Q9UKK6 140 aaKnown RBP21.73■■□□□ 1.07
TMEM260-207ENST00000555497 KLK3P07288 261 aaPredicted RBP21.72■■□□□ 1.07
TMEM260-207ENST00000555497 CSRP1P21291 193 aaKnown RBP21.72■■□□□ 1.07
TMEM260-207ENST00000555497 DUSP3P51452 185 aaPredicted RBP21.72■■□□□ 1.07
TMEM260-207ENST00000555497 MC2RQ01718 297 aa21.72■■□□□ 1.07
TMEM260-207ENST00000555497 TRA2AQ13595 282 aaKnown RBP eCLIP21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms