RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 MRPS33Q9Y291 106 aaKnown RBP9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 PIAS3Q9Y6X2 628 aa9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 SCN2AQ99250 2005 aa9.7□□□□□ -0.86
MTHFD1-210ENST00000555252 A0A0A6YYH2 397 aa9.69□□□□□ -0.86
MTHFD1-210ENST00000555252 NPIPA5A0A0B4J1W7 369 aa9.69□□□□□ -0.86
MTHFD1-210ENST00000555252 A0A1B0GWA3 101 aa9.69□□□□□ -0.86
MTHFD1-210ENST00000555252 A6NJ64 397 aa9.69□□□□□ -0.86
MTHFD1-210ENST00000555252 TMEM212A6NML5 194 aa9.69□□□□□ -0.86
MTHFD1-210ENST00000555252 NPIPA7E9PJI5 369 aa9.69□□□□□ -0.86
MTHFD1-210ENST00000555252 GPR31O00270 319 aa9.69□□□□□ -0.86
MTHFD1-210ENST00000555252 WNT11O96014 354 aa9.69□□□□□ -0.86
MTHFD1-210ENST00000555252 NPIPA8P0DM63 369 aa9.69□□□□□ -0.86
MTHFD1-210ENST00000555252 CD79AP11912 226 aa9.69□□□□□ -0.86
MTHFD1-210ENST00000555252 POLR2GP62487 172 aaKnown RBP eCLIP9.69□□□□□ -0.86
MTHFD1-210ENST00000555252 ZNF141Q15928 474 aa9.69□□□□□ -0.86
MTHFD1-210ENST00000555252 SWI5Q1ZZU3 235 aa9.69□□□□□ -0.86
MTHFD1-210ENST00000555252 NKAPLQ5M9Q1 402 aa9.69□□□□□ -0.86
MTHFD1-210ENST00000555252 TMEFF1Q8IYR6 380 aa9.69□□□□□ -0.86
MTHFD1-210ENST00000555252 GABRG1Q8N1C3 465 aa9.69□□□□□ -0.86
MTHFD1-210ENST00000555252 DUSP19Q8WTR2 217 aa9.69□□□□□ -0.86
MTHFD1-210ENST00000555252 RNF166Q96A37 237 aaPredicted RBP9.69□□□□□ -0.86
MTHFD1-210ENST00000555252 SMAD5Q99717 465 aaKnown RBP9.69□□□□□ -0.86
MTHFD1-210ENST00000555252 TCEAL7Q9BRU2 100 aa9.69□□□□□ -0.86
MTHFD1-210ENST00000555252 G6PC3Q9BUM1 346 aa9.69□□□□□ -0.86
MTHFD1-210ENST00000555252 TTTY10Q9BZA0 68 aa9.69□□□□□ -0.86
MTHFD1-210ENST00000555252 COMMD4Q9H0A8 199 aa9.69□□□□□ -0.86
MTHFD1-210ENST00000555252 MKL2Q9ULH7 1088 aa9.69□□□□□ -0.86
MTHFD1-210ENST00000555252 IER3IP1Q9Y5U9 82 aa9.69□□□□□ -0.86
MTHFD1-210ENST00000555252 TCRBV21S2A2A0A5A6 115 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 MCIDASD6RGH6 385 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 F8VVB4 439 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 F8VWA3 439 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 YKT6O15498 198 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 PTHLHP12272 177 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 RNH1P13489 461 aaKnown RBP9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 APEHP13798 732 aaKnown RBP9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 PTNP21246 168 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 CD34P28906 385 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 BDKRB2P30411 391 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 DLSTP36957 453 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 FNTBP49356 437 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 FAM74A1Q5RGS3 127 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 STPG1Q5TH74 334 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 FAHD2BQ6P2I3 314 aaPredicted RBP9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 ULK3Q6PHR2 472 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 DRAM2Q6UX65 266 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 MAMSTRQ6ZN01 415 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 OR13H1Q8NG92 308 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 OR1S2Q8NGQ3 325 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 OR6S1Q8NH40 331 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 THAP6Q8TBB0 222 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 GRHL3Q8TE85 626 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 SLC37A2Q8TED4 501 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 OIT3Q8WWZ8 545 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 FAHD2AQ96GK7 314 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 CNTNAP3BQ96NU0 1288 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 CCNL2Q96S94 520 aaPredicted RBP9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 CDC6Q99741 560 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 ZNF251Q9BRH9 671 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 MKKSQ9NPJ1 570 aaPredicted RBP9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 MMP26Q9NRE1 261 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 RXFP3Q9NSD7 469 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 DNAJB12Q9NXW2 375 aaKnown RBP9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 FLRT3Q9NZU0 649 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 MMP17Q9ULZ9 603 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 ERVK-19Q9WJR5 959 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 SCN3AQ9NY46 2000 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 LOC100289279A0A1B0GTE1 492 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 EFCAB7A8K855 629 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 PHYHO14832 338 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 UPK3AO75631 287 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 SLC25A12O75746 678 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 CD74P04233 296 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 TPT1P13693 172 aaKnown RBP9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 ABOP16442 354 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 GABRG2P18507 467 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 S1PR1P21453 382 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 MPZP25189 248 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 CASRP41180 1078 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 ACAA2P42765 397 aaKnown RBP9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 BLKP51451 505 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 PRPS1P60891 318 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 UBE2MP61081 183 aaKnown RBP9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 PSG6Q00889 435 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 RASGEF1BQ0VAM2 473 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 INPP5JQ15735 1006 aaPredicted RBP9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 ALG10BQ5I7T1 473 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 LINC01590Q5TEZ4 76 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 LIPNQ5VXI9 398 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 NKAIN2Q5VXU1 208 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 KIAA0895LQ68EN5 471 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 TMEM92Q6UXU6 159 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 TAF8Q7Z7C8 310 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 AVL9Q8NBF6 648 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 INO80EQ8NBZ0 244 aaPredicted RBP9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 FAM174AQ8TBP5 190 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 DOK4Q8TEW6 326 aa9.68□□□□□ -0.86
MTHFD1-210ENST00000555252 RNF141Q8WVD5 230 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms