RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 SNX33Q8WV41 574 aa10.04□□□□□ -0.8
SRP54-205ENST00000554803 LIPHQ8WWY8 451 aa10.04□□□□□ -0.8
SRP54-205ENST00000554803 CNOT9Q92600 299 aaKnown RBP10.04□□□□□ -0.8
SRP54-205ENST00000554803 NACC2Q96BF6 587 aa10.04□□□□□ -0.8
SRP54-205ENST00000554803 CTHRC1Q96CG8 243 aa10.04□□□□□ -0.8
SRP54-205ENST00000554803 ZNF501Q96CX3 271 aaPredicted RBP10.04□□□□□ -0.8
SRP54-205ENST00000554803 PELOQ9BRX2 385 aaKnown RBP10.04□□□□□ -0.8
SRP54-205ENST00000554803 ZNF552Q9H707 407 aaPredicted RBP10.04□□□□□ -0.8
SRP54-205ENST00000554803 KLHL1Q9NR64 748 aa10.04□□□□□ -0.8
SRP54-205ENST00000554803 RPS6KB2Q9UBS0 482 aa10.04□□□□□ -0.8
SRP54-205ENST00000554803 DUX4Q9UBX2 424 aa10.04□□□□□ -0.8
SRP54-205ENST00000554803 CHRNA9Q9UGM1 479 aa10.04□□□□□ -0.8
SRP54-205ENST00000554803 ZNF222Q9UK12 451 aa10.04□□□□□ -0.8
SRP54-205ENST00000554803 MRPS33Q9Y291 106 aaKnown RBP10.04□□□□□ -0.8
SRP54-205ENST00000554803 ZNF860A6NHJ4 632 aa10.03□□□□□ -0.8
SRP54-205ENST00000554803 FAM183AA6NL82 134 aa10.03□□□□□ -0.8
SRP54-205ENST00000554803 LEUTXA8MZ59 168 aa10.03□□□□□ -0.8
SRP54-205ENST00000554803 GPR171O14626 319 aa10.03□□□□□ -0.8
SRP54-205ENST00000554803 BET1O15155 118 aa10.03□□□□□ -0.8
SRP54-205ENST00000554803 KRT33AO76009 404 aa10.03□□□□□ -0.8
SRP54-205ENST00000554803 PNMTP11086 282 aa10.03□□□□□ -0.8
SRP54-205ENST00000554803 PSMB1P20618 241 aaKnown RBP10.03□□□□□ -0.8
SRP54-205ENST00000554803 DNASE1P24855 282 aa10.03□□□□□ -0.8
SRP54-205ENST00000554803 PYCR1P32322 319 aa10.03□□□□□ -0.8
SRP54-205ENST00000554803 GALNSP34059 522 aa10.03□□□□□ -0.8
SRP54-205ENST00000554803 CAPZA1P52907 286 aa10.03□□□□□ -0.8
SRP54-205ENST00000554803 RAB38P57729 211 aa10.03□□□□□ -0.8
SRP54-205ENST00000554803 SLC3A1Q07837 685 aa10.03□□□□□ -0.8
SRP54-205ENST00000554803 SNTA1Q13424 505 aa10.03□□□□□ -0.8
SRP54-205ENST00000554803 CRMP1Q14194 572 aa10.03□□□□□ -0.8
SRP54-205ENST00000554803 GRK1Q15835 563 aa10.03□□□□□ -0.8
SRP54-205ENST00000554803 PRICKLE4Q2TBC4 344 aa10.03□□□□□ -0.8
SRP54-205ENST00000554803 ZNF750Q32MQ0 723 aa10.03□□□□□ -0.8
SRP54-205ENST00000554803 FAM69BQ5VUD6 431 aa10.03□□□□□ -0.8
SRP54-205ENST00000554803 FAM220AQ7Z4H9 259 aa10.03□□□□□ -0.8
SRP54-205ENST00000554803 MRGPRGQ86SM5 289 aa10.03□□□□□ -0.8
SRP54-205ENST00000554803 SIAH3Q8IW03 269 aa10.03□□□□□ -0.8
SRP54-205ENST00000554803 OR13C2Q8NGS9 318 aa10.03□□□□□ -0.8
SRP54-205ENST00000554803 ZNF671Q8TAW3 534 aa10.03□□□□□ -0.8
SRP54-205ENST00000554803 FCAMRQ8WWV6 532 aa10.03□□□□□ -0.8
SRP54-205ENST00000554803 SGTBQ96EQ0 304 aa10.03□□□□□ -0.8
SRP54-205ENST00000554803 C14orf79Q96F83 325 aa10.03□□□□□ -0.8
SRP54-205ENST00000554803 S100A16Q96FQ6 103 aaKnown RBP10.03□□□□□ -0.8
SRP54-205ENST00000554803 C12orf10Q9HB07 376 aa10.03□□□□□ -0.8
SRP54-205ENST00000554803 BRD7Q9NPI1 651 aa10.03□□□□□ -0.8
SRP54-205ENST00000554803 MAT2BQ9NZL9 334 aa10.03□□□□□ -0.8
SRP54-205ENST00000554803 KCNN3Q9UGI6 736 aa10.03□□□□□ -0.8
SRP54-205ENST00000554803 ZNF281Q9Y2X9 895 aa10.03□□□□□ -0.8
SRP54-205ENST00000554803 ZNF337Q9Y3M9 751 aa10.03□□□□□ -0.8
SRP54-205ENST00000554803 SIRT4Q9Y6E7 314 aaPredicted RBP10.03□□□□□ -0.8
SRP54-205ENST00000554803 TRBV2A0A0J9YWF9 115 aa10.02□□□□□ -0.81
SRP54-205ENST00000554803 A0A1B0GWA3 101 aa10.02□□□□□ -0.81
SRP54-205ENST00000554803 FAM221AA4D161 298 aa10.02□□□□□ -0.81
SRP54-205ENST00000554803 MEN1O00255 615 aa10.02□□□□□ -0.81
SRP54-205ENST00000554803 SSNA1O43805 119 aa10.02□□□□□ -0.81
SRP54-205ENST00000554803 SRPX2O60687 465 aaPredicted RBP10.02□□□□□ -0.81
SRP54-205ENST00000554803 ADH7P40394 386 aa10.02□□□□□ -0.81
SRP54-205ENST00000554803 SLC16A1P53985 500 aa10.02□□□□□ -0.81
SRP54-205ENST00000554803 CAMK2DQ13557 499 aa10.02□□□□□ -0.81
SRP54-205ENST00000554803 FGFBP1Q14512 234 aa10.02□□□□□ -0.81
SRP54-205ENST00000554803 DEFB134Q4QY38 66 aa10.02□□□□□ -0.81
SRP54-205ENST00000554803 ALG10BQ5I7T1 473 aa10.02□□□□□ -0.81
SRP54-205ENST00000554803 SEZ6L2Q6UXD5 910 aa10.02□□□□□ -0.81
SRP54-205ENST00000554803 LINGO2Q7L985 606 aa10.02□□□□□ -0.81
SRP54-205ENST00000554803 OLIG3Q7RTU3 272 aa10.02□□□□□ -0.81
SRP54-205ENST00000554803 GALNT16Q8N428 558 aa10.02□□□□□ -0.81
SRP54-205ENST00000554803 METTL27Q8N6F8 245 aaPredicted RBP10.02□□□□□ -0.81
SRP54-205ENST00000554803 OR5T3Q8NGG3 340 aa10.02□□□□□ -0.81
SRP54-205ENST00000554803 OR9A4Q8NGU2 314 aa10.02□□□□□ -0.81
SRP54-205ENST00000554803 PFN4Q8NHR9 129 aa10.02□□□□□ -0.81
SRP54-205ENST00000554803 PELI1Q96FA3 418 aa10.02□□□□□ -0.81
SRP54-205ENST00000554803 CCDC120Q96HB5 630 aa10.02□□□□□ -0.81
SRP54-205ENST00000554803 IP6K3Q96PC2 410 aa10.02□□□□□ -0.81
SRP54-205ENST00000554803 WDR77Q9BQA1 342 aaPredicted RBP10.02□□□□□ -0.81
SRP54-205ENST00000554803 NMNAT2Q9BZQ4 307 aa10.02□□□□□ -0.81
SRP54-205ENST00000554803 ZNF436Q9C0F3 470 aaPredicted RBP10.02□□□□□ -0.81
SRP54-205ENST00000554803 C20orf85Q9H1P6 137 aa10.02□□□□□ -0.81
SRP54-205ENST00000554803 OR51V1Q9H2C8 321 aa10.02□□□□□ -0.81
SRP54-205ENST00000554803 ADAP2Q9NPF8 381 aa10.02□□□□□ -0.81
SRP54-205ENST00000554803 SLC17A5Q9NRA2 495 aa10.02□□□□□ -0.81
SRP54-205ENST00000554803 GLTPQ9NZD2 209 aa10.02□□□□□ -0.81
SRP54-205ENST00000554803 CYB5R1Q9UHQ9 305 aa10.02□□□□□ -0.81
SRP54-205ENST00000554803 GLS2Q9UI32 602 aa10.02□□□□□ -0.81
SRP54-205ENST00000554803 TMEM14AQ9Y6G1 99 aa10.02□□□□□ -0.81
SRP54-205ENST00000554803 INTS1Q8N201 2190 aaKnown RBP10.01□□□□□ -0.81
SRP54-205ENST00000554803 A0A0A6YYC8 382 aaPredicted RBP10.01□□□□□ -0.81
SRP54-205ENST00000554803 SMIM30A4D0T7 59 aa10.01□□□□□ -0.81
SRP54-205ENST00000554803 FITM1A5D6W6 292 aa10.01□□□□□ -0.81
SRP54-205ENST00000554803 OR6C65A6NJZ3 312 aa10.01□□□□□ -0.81
SRP54-205ENST00000554803 IFITM5A6NNB3 132 aa10.01□□□□□ -0.81
SRP54-205ENST00000554803 HMSDA8MTL9 139 aa10.01□□□□□ -0.81
SRP54-205ENST00000554803 I3L1I5 382 aaPredicted RBP10.01□□□□□ -0.81
SRP54-205ENST00000554803 M0R233 179 aa10.01□□□□□ -0.81
SRP54-205ENST00000554803 CYR61O00622 381 aa10.01□□□□□ -0.81
SRP54-205ENST00000554803 FOXS1O43638 330 aa10.01□□□□□ -0.81
SRP54-205ENST00000554803 GALR3O60755 368 aaPredicted RBP10.01□□□□□ -0.81
SRP54-205ENST00000554803 RDH16O75452 317 aa10.01□□□□□ -0.81
SRP54-205ENST00000554803 GLCEO94923 617 aa10.01□□□□□ -0.81
SRP54-205ENST00000554803 PPP1R3DO95685 299 aa10.01□□□□□ -0.81
SRP54-205ENST00000554803 IGHEP01854 428 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms