RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 C19orf43Q9BQ61 176 aa12.81□□□□□ -0.36
VTI1B-204ENST00000554659 USB1Q9BQ65 265 aaKnown RBP12.81□□□□□ -0.36
VTI1B-204ENST00000554659 MED18Q9BUE0 208 aa12.81□□□□□ -0.36
VTI1B-204ENST00000554659 TRAPPC2LQ9UL33 140 aa12.81□□□□□ -0.36
VTI1B-204ENST00000554659 HSPB6O14558 160 aa12.81□□□□□ -0.36
VTI1B-204ENST00000554659 EIF1BO60739 113 aaKnown RBP12.81□□□□□ -0.36
VTI1B-204ENST00000554659 SOD1P00441 154 aa12.81□□□□□ -0.36
VTI1B-204ENST00000554659 PRPH2P23942 346 aa12.81□□□□□ -0.36
VTI1B-204ENST00000554659 LAP3P28838 519 aa12.81□□□□□ -0.36
VTI1B-204ENST00000554659 IKZF1Q13422 519 aa12.81□□□□□ -0.36
VTI1B-204ENST00000554659 GLYR1Q49A26 553 aaPredicted RBP12.81□□□□□ -0.36
VTI1B-204ENST00000554659 PRSS35Q8N3Z0 413 aa12.81□□□□□ -0.36
VTI1B-204ENST00000554659 OR52I2Q8NH67 350 aa12.81□□□□□ -0.36
VTI1B-204ENST00000554659 SDF2Q99470 211 aa12.81□□□□□ -0.36
VTI1B-204ENST00000554659 R3HDMLQ9H3Y0 253 aa12.81□□□□□ -0.36
VTI1B-204ENST00000554659 BCL2L10Q9HD36 194 aa12.81□□□□□ -0.36
VTI1B-204ENST00000554659 ALS2Q96Q42 1657 aa12.81□□□□□ -0.36
VTI1B-204ENST00000554659 SCRG1O75711 98 aa12.81□□□□□ -0.36
VTI1B-204ENST00000554659 GABRA2P47869 451 aa12.81□□□□□ -0.36
VTI1B-204ENST00000554659 GRB2P62993 217 aaKnown RBP12.81□□□□□ -0.36
VTI1B-204ENST00000554659 C1orf140Q5VVS0 124 aa12.81□□□□□ -0.36
VTI1B-204ENST00000554659 PAQR6Q6TCH4 344 aa12.81□□□□□ -0.36
VTI1B-204ENST00000554659 TMEM179BQ7Z7N9 219 aa12.81□□□□□ -0.36
VTI1B-204ENST00000554659 S100A7AQ86SG5 101 aa12.81□□□□□ -0.36
VTI1B-204ENST00000554659 SYS1Q8N2H4 156 aa12.81□□□□□ -0.36
VTI1B-204ENST00000554659 ULBP3Q9BZM4 244 aa12.81□□□□□ -0.36
VTI1B-204ENST00000554659 MYOTQ9UBF9 498 aa12.81□□□□□ -0.36
VTI1B-204ENST00000554659 CHST2Q9Y4C5 530 aa12.81□□□□□ -0.36
VTI1B-204ENST00000554659 AHDC1Q5TGY3 1603 aaPredicted RBP12.81□□□□□ -0.36
VTI1B-204ENST00000554659 ZDHHC11BP0C7U3 371 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 OR13C7P0DN81 318 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 ICAM2P13598 275 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 CLDN20P56880 219 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 ANKRD34AQ69YU3 496 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 GLIPR1L1Q6UWM5 242 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 DCXRQ7Z4W1 244 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 SUCNR1Q9BXA5 334 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 NECAP2Q9NVZ3 263 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 DAPP1Q9UN19 280 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 TMX2-CTNND1H3BSU7 103 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 IGFBP1P08833 259 aaPredicted RBP12.8□□□□□ -0.36
VTI1B-204ENST00000554659 EVX1P49640 407 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 MAP2K6P52564 334 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 HSD17B7P56937 341 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 RPL27P61353 136 aaKnown RBP12.8□□□□□ -0.36
VTI1B-204ENST00000554659 DPTQ07507 201 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 LIPNQ5VXI9 398 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 PTOV1Q86YD1 416 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 C15orf54Q8N8G6 183 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 SLC35A4Q96G79 324 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 TPPP3Q9BW30 176 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 ZMAT3Q9HA38 289 aaKnown RBP12.8□□□□□ -0.36
VTI1B-204ENST00000554659 SDK1Q7Z5N4 2213 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 CYB5BO43169 146 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 OR2F2O95006 317 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 HLA-HP01893 362 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 RACK1P63244 317 aaKnown RBP12.8□□□□□ -0.36
VTI1B-204ENST00000554659 DGCR2P98153 550 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 DUSP8Q13202 625 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 OR2F1Q13607 317 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 PDZD11Q5EBL8 140 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 PHYHD1Q5SRE7 291 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 C9orf135Q5VTT2 229 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 CLEC1AQ8NC01 280 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 C2CD4CQ8TF44 421 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 ABHD6Q9BV23 337 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 A0A1W2PR48 441 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 DOK2O60496 412 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 ARG2P78540 354 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 PDZK1IP1Q13113 114 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 AQP6Q13520 282 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 EMC4Q5J8M3 183 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 TMEM31Q5JXX7 168 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 GRINAQ7Z429 371 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 NAA40Q86UY6 237 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 LGI3Q8N145 548 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 OR10Z1Q8NGY1 313 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 HSD17B8Q92506 261 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 HRASLSQ9HDD0 168 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 LTB4R2Q9NPC1 389 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 SLC22A11Q9NSA0 550 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 OBP2AQ9NY56 170 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 TLCD2A6NGC4 264 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 B3GALT4O96024 378 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 BAK1Q16611 211 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 CDKN3Q16667 212 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 RLN3Q8WXF3 142 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 DCBLD2Q96PD2 775 aa12.8□□□□□ -0.36
VTI1B-204ENST00000554659 ZFP92A6NM28 416 aa12.79□□□□□ -0.36
VTI1B-204ENST00000554659 MT-ND4LP03901 98 aa12.79□□□□□ -0.36
VTI1B-204ENST00000554659 CSF3P09919 207 aa12.79□□□□□ -0.36
VTI1B-204ENST00000554659 PXNP49023 591 aaPredicted RBP12.79□□□□□ -0.36
VTI1B-204ENST00000554659 HOXA1P49639 335 aaPredicted RBP12.79□□□□□ -0.36
VTI1B-204ENST00000554659 CYHR1Q6ZMK1 362 aa12.79□□□□□ -0.36
VTI1B-204ENST00000554659 LFNGQ8NES3 379 aa12.79□□□□□ -0.36
VTI1B-204ENST00000554659 NANPQ8TBE9 248 aa12.79□□□□□ -0.36
VTI1B-204ENST00000554659 DCLRE1CQ96SD1 692 aaKnown RBP12.79□□□□□ -0.36
VTI1B-204ENST00000554659 FAM234AQ9H0X4 552 aa12.79□□□□□ -0.36
VTI1B-204ENST00000554659 GHRLQ9UBU3 117 aa12.79□□□□□ -0.36
VTI1B-204ENST00000554659 A0A0A6YYJ9 748 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms