RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 DAP3P51398 398 aaKnown RBP2.32□□□□□ -2.04
SCFD1-210ENST00000553693 SH3BGRP55822 239 aaPredicted RBP2.32□□□□□ -2.04
SCFD1-210ENST00000553693 RGS8P57771 180 aaPredicted RBP2.32□□□□□ -2.04
SCFD1-210ENST00000553693 SNAP25P60880 206 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 ST3GAL3Q11203 375 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 DAZ2Q13117 558 aaKnown RBP2.32□□□□□ -2.04
SCFD1-210ENST00000553693 SRSF5Q13243 272 aaKnown RBP2.32□□□□□ -2.04
SCFD1-210ENST00000553693 IL18Q14116 193 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 KCNJ11Q14654 390 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 TGFBIQ15582 683 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 SLC25A52Q3SY17 297 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 SFT2D3Q587I9 215 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 C6orf226Q5I0X4 101 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 RNASEKQ6P5S7 137 aaKnown RBP2.32□□□□□ -2.04
SCFD1-210ENST00000553693 ECHDC2Q86YB7 292 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 EGFL6Q8IUX8 553 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 ZNF561Q8N587 486 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 KIR3DL3Q8N743 410 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 ARIH2OSQ8N7S6 290 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 OR5L2Q8NGL0 311 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 BRSK1Q8TDC3 778 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 HTR3CQ8WXA8 447 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 PSMG2Q969U7 264 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 TMEM101Q96IK0 257 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 ZNF641Q96N77 438 aaPredicted RBP2.32□□□□□ -2.04
SCFD1-210ENST00000553693 NPY6RQ99463 290 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 CHP1Q99653 195 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 MTG1Q9BT17 334 aaPredicted RBP2.32□□□□□ -2.04
SCFD1-210ENST00000553693 GPR61Q9BZJ8 451 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 RBKSQ9H477 322 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 EXO5Q9H790 373 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 POPDC2Q9HBU9 364 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 DAZ3Q9NR90 486 aaKnown RBP2.32□□□□□ -2.04
SCFD1-210ENST00000553693 PHF11Q9UIL8 331 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 ANGPTL2Q9UKU9 493 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 NAP1L2Q9ULW6 460 aaPredicted RBP2.32□□□□□ -2.04
SCFD1-210ENST00000553693 SAMD4AQ9UPU9 718 aaKnown RBP2.32□□□□□ -2.04
SCFD1-210ENST00000553693 RASD1Q9Y272 281 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 MEMO1Q9Y316 297 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 Q9Y3F1 56 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 FOCADQ5VW36 1801 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 NCOR2Q9Y618 2525 aa2.32□□□□□ -2.04
SCFD1-210ENST00000553693 RIF1Q5UIP0 2472 aaKnown RBP2.31□□□□□ -2.04
SCFD1-210ENST00000553693 SIP14410 1827 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 PARP14Q460N5 1801 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 MYH1P12882 1939 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 MCM3APO60318 1980 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 ARHGAP21Q5T5U3 1957 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 DMDP11532 3685 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 TRDCB7Z8K6 153 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 SULT2B1O00204 365 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 PSTPIP1O43586 416 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 PRKYO43930 277 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 OXSR1O95747 527 aaPredicted RBP2.31□□□□□ -2.04
SCFD1-210ENST00000553693 LALBAP00709 142 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 LGALS2P05162 132 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 CAPN1P07384 714 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 ANXA8P13928 327 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 SLC2A5P22732 501 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 MMP11P24347 488 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 ADORA2BP29275 332 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 NMT1P30419 496 aaKnown RBP2.31□□□□□ -2.04
SCFD1-210ENST00000553693 IFNA8P32881 189 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 GCKP35557 465 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 HSD17B2P37059 387 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 CCT6AP40227 531 aaKnown RBP2.31□□□□□ -2.04
SCFD1-210ENST00000553693 RPL29P47914 159 aaKnown RBP2.31□□□□□ -2.04
SCFD1-210ENST00000553693 RFX3P48380 749 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 PRKXP51817 358 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 MRPS11P82912 194 aaKnown RBP2.31□□□□□ -2.04
SCFD1-210ENST00000553693 TGM3Q08188 693 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 EGFEM1PQ0D2K5 195 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 BST1Q10588 318 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 BST2Q10589 180 aaKnown RBP2.31□□□□□ -2.04
SCFD1-210ENST00000553693 ZNF154Q13106 437 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 ARL6IP1Q15041 203 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 CFAP221Q4G0U5 840 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 ANXA8L1Q5VT79 327 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 PVRIGQ6DKI7 326 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 ANGPTL8Q6UXH0 198 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 LRRC31Q6UY01 552 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 STAC2Q6ZMT1 411 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 DNM1P46Q6ZS02 220 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 LUZP2Q86TE4 346 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 ZNF589Q86UQ0 364 aaPredicted RBP2.31□□□□□ -2.04
SCFD1-210ENST00000553693 NUDCD3Q8IVD9 361 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 MYOCDQ8IZQ8 938 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 OR4D9Q8NGE8 314 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 OR9A1PQ8NGU1 263 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 AGR3Q8TD06 166 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 SDR42E1Q8WUS8 393 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 DCUN1D4Q92564 292 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 TOP1MTQ969P6 601 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 UBE2E3Q969T4 207 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 NIPSNAP3BQ9BS92 247 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 TRIM62Q9BVG3 475 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 REEP4Q9H6H4 257 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 SLC38A10Q9HBR0 1119 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 NEK6Q9HC98 313 aa2.31□□□□□ -2.04
SCFD1-210ENST00000553693 CHRAC1Q9NRG0 131 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms