RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 PPP1R3CQ9UQK1 317 aa11.5□□□□□ -0.57
PRPF39-204ENST00000553605 CHST2Q9Y4C5 530 aa11.5□□□□□ -0.57
PRPF39-204ENST00000553605 BIRC6Q9NR09 4857 aa11.5□□□□□ -0.57
PRPF39-204ENST00000553605 EPPK1P58107 5090 aaKnown RBP11.49□□□□□ -0.57
PRPF39-204ENST00000553605 IGKV1D-42A0A075B6H8 117 aa11.49□□□□□ -0.57
PRPF39-204ENST00000553605 TMEM178BH3BS89 294 aa11.49□□□□□ -0.57
PRPF39-204ENST00000553605 XPNPEP2O43895 674 aa11.49□□□□□ -0.57
PRPF39-204ENST00000553605 TRIM13O60858 407 aa11.49□□□□□ -0.57
PRPF39-204ENST00000553605 TSPAN9O75954 239 aa11.49□□□□□ -0.57
PRPF39-204ENST00000553605 TNFSF4P23510 183 aa11.49□□□□□ -0.57
PRPF39-204ENST00000553605 AHCYP23526 432 aa11.49□□□□□ -0.57
PRPF39-204ENST00000553605 STOMP27105 288 aa11.49□□□□□ -0.57
PRPF39-204ENST00000553605 WNT5AP41221 380 aa11.49□□□□□ -0.57
PRPF39-204ENST00000553605 EMX2Q04743 252 aa11.49□□□□□ -0.57
PRPF39-204ENST00000553605 MTX3Q5HYI7 312 aa11.49□□□□□ -0.57
PRPF39-204ENST00000553605 DHRS7BQ6IAN0 325 aaPredicted RBP11.49□□□□□ -0.57
PRPF39-204ENST00000553605 SLC27A4Q6P1M0 643 aa11.49□□□□□ -0.57
PRPF39-204ENST00000553605 LRFN4Q6PJG9 635 aa11.49□□□□□ -0.57
PRPF39-204ENST00000553605 SCAIQ8N9R8 606 aa11.49□□□□□ -0.57
PRPF39-204ENST00000553605 HIPK4Q8NE63 616 aa11.49□□□□□ -0.57
PRPF39-204ENST00000553605 GATAD2BQ8WXI9 593 aa11.49□□□□□ -0.57
PRPF39-204ENST00000553605 IFT81Q8WYA0 676 aa11.49□□□□□ -0.57
PRPF39-204ENST00000553605 NEIL1Q96FI4 390 aaPredicted RBP11.49□□□□□ -0.57
PRPF39-204ENST00000553605 SPATA9Q9BWV2 254 aa11.49□□□□□ -0.57
PRPF39-204ENST00000553605 TRIM15Q9C019 465 aa11.49□□□□□ -0.57
PRPF39-204ENST00000553605 ARMC7Q9H6L4 198 aa11.49□□□□□ -0.57
PRPF39-204ENST00000553605 TMEM165Q9HC07 324 aa11.49□□□□□ -0.57
PRPF39-204ENST00000553605 NOP53Q9NZM5 478 aaKnown RBP11.49□□□□□ -0.57
PRPF39-204ENST00000553605 KIF17Q9P2E2 1029 aa11.49□□□□□ -0.57
PRPF39-204ENST00000553605 PSMC3IPQ9P2W1 217 aaPredicted RBP11.49□□□□□ -0.57
PRPF39-204ENST00000553605 NOTCH3Q9UM47 2321 aa11.48□□□□□ -0.57
PRPF39-204ENST00000553605 CENPVL3A0A0U1RRI6 287 aa11.48□□□□□ -0.57
PRPF39-204ENST00000553605 SHOX2O60902 331 aaPredicted RBP11.48□□□□□ -0.57
PRPF39-204ENST00000553605 ABHD2P08910 425 aa11.48□□□□□ -0.57
PRPF39-204ENST00000553605 HSF2Q03933 536 aa11.48□□□□□ -0.57
PRPF39-204ENST00000553605 PCLAFQ15004 111 aa11.48□□□□□ -0.57
PRPF39-204ENST00000553605 OR2Z1Q8NG97 314 aa11.48□□□□□ -0.57
PRPF39-204ENST00000553605 OR6S1Q8NH40 331 aa11.48□□□□□ -0.57
PRPF39-204ENST00000553605 LRTOMTQ8WZ04 291 aa11.48□□□□□ -0.57
PRPF39-204ENST00000553605 PHF21AQ96BD5 680 aa11.48□□□□□ -0.57
PRPF39-204ENST00000553605 DPAGT1Q9H3H5 408 aa11.48□□□□□ -0.57
PRPF39-204ENST00000553605 ASIC5Q9NY37 505 aa11.48□□□□□ -0.57
PRPF39-204ENST00000553605 MRPL39Q9NYK5 338 aaKnown RBP11.48□□□□□ -0.57
PRPF39-204ENST00000553605 C5orf49A4QMS7 147 aa11.47□□□□□ -0.57
PRPF39-204ENST00000553605 CCDC154A6NI56 674 aa11.47□□□□□ -0.57
PRPF39-204ENST00000553605 P2RY10O00398 339 aa11.47□□□□□ -0.57
PRPF39-204ENST00000553605 PLPP3O14495 311 aa11.47□□□□□ -0.57
PRPF39-204ENST00000553605 TIMM8AO60220 97 aaPredicted RBP11.47□□□□□ -0.57
PRPF39-204ENST00000553605 ZNF205O95201 554 aa11.47□□□□□ -0.57
PRPF39-204ENST00000553605 SFTPBP07988 381 aa11.47□□□□□ -0.57
PRPF39-204ENST00000553605 MMP7P09237 267 aaPredicted RBP11.47□□□□□ -0.57
PRPF39-204ENST00000553605 PPP1CBP62140 327 aa11.47□□□□□ -0.57
PRPF39-204ENST00000553605 DBPQ10586 325 aaPredicted RBP11.47□□□□□ -0.57
PRPF39-204ENST00000553605 NRN1LQ496H8 165 aa11.47□□□□□ -0.57
PRPF39-204ENST00000553605 PDCD4Q53EL6 469 aaKnown RBP11.47□□□□□ -0.57
PRPF39-204ENST00000553605 PABPC1L2AQ5JQF8 200 aa11.47□□□□□ -0.57
PRPF39-204ENST00000553605 LDLRAD3Q86YD5 345 aa11.47□□□□□ -0.57
PRPF39-204ENST00000553605 LRRC18Q8N456 261 aa11.47□□□□□ -0.57
PRPF39-204ENST00000553605 TRIML2Q8N7C3 387 aa11.47□□□□□ -0.57
PRPF39-204ENST00000553605 OR8B3Q8NGG8 313 aa11.47□□□□□ -0.57
PRPF39-204ENST00000553605 OR6X1Q8NH79 312 aa11.47□□□□□ -0.57
PRPF39-204ENST00000553605 ITLN1Q8WWA0 313 aa11.47□□□□□ -0.57
PRPF39-204ENST00000553605 ZNF566Q969W8 418 aa11.47□□□□□ -0.57
PRPF39-204ENST00000553605 ITPKCQ96DU7 683 aa11.47□□□□□ -0.57
PRPF39-204ENST00000553605 POM121L2Q96KW2 1035 aa11.47□□□□□ -0.57
PRPF39-204ENST00000553605 OR8B2Q96RD0 313 aa11.47□□□□□ -0.57
PRPF39-204ENST00000553605 RHOXF2Q9BQY4 288 aa11.47□□□□□ -0.57
PRPF39-204ENST00000553605 KRTAP17-1Q9BYP8 105 aa11.47□□□□□ -0.57
PRPF39-204ENST00000553605 CALML5Q9NZT1 146 aa11.47□□□□□ -0.57
PRPF39-204ENST00000553605 P2RX2Q9UBL9 471 aa11.47□□□□□ -0.57
PRPF39-204ENST00000553605 IL19Q9UHD0 177 aa11.47□□□□□ -0.57
PRPF39-204ENST00000553605 H3BSA7 217 aa11.46□□□□□ -0.57
PRPF39-204ENST00000553605 BGLAPP02818 100 aa11.46□□□□□ -0.57
PRPF39-204ENST00000553605 QDPRP09417 244 aa11.46□□□□□ -0.57
PRPF39-204ENST00000553605 CFHR2P36980 270 aa11.46□□□□□ -0.57
PRPF39-204ENST00000553605 PITPNBP48739 271 aa11.46□□□□□ -0.57
PRPF39-204ENST00000553605 CRISP3P54108 245 aa11.46□□□□□ -0.57
PRPF39-204ENST00000553605 ALG10BQ5I7T1 473 aa11.46□□□□□ -0.57
PRPF39-204ENST00000553605 SPANXN4Q5MJ08 99 aa11.46□□□□□ -0.57
PRPF39-204ENST00000553605 FOXB2Q5VYV0 432 aa11.46□□□□□ -0.57
PRPF39-204ENST00000553605 ZNF621Q6ZSS3 439 aa11.46□□□□□ -0.57
PRPF39-204ENST00000553605 RFPL4BQ6ZWI9 263 aa11.46□□□□□ -0.57
PRPF39-204ENST00000553605 VASH1Q7L8A9 365 aaPredicted RBP11.46□□□□□ -0.57
PRPF39-204ENST00000553605 NLRC3Q7RTR2 1065 aa11.46□□□□□ -0.57
PRPF39-204ENST00000553605 ZNF572Q7Z3I7 529 aaPredicted RBP11.46□□□□□ -0.57
PRPF39-204ENST00000553605 ZER1Q7Z7L7 766 aa11.46□□□□□ -0.57
PRPF39-204ENST00000553605 PTOV1Q86YD1 416 aa11.46□□□□□ -0.57
PRPF39-204ENST00000553605 GALNT4Q8N4A0 578 aa11.46□□□□□ -0.57
PRPF39-204ENST00000553605 C11orf44Q8N8P7 122 aa11.46□□□□□ -0.57
PRPF39-204ENST00000553605 ABHD4Q8TB40 342 aa11.46□□□□□ -0.57
PRPF39-204ENST00000553605 SLC35B4Q969S0 331 aa11.46□□□□□ -0.57
PRPF39-204ENST00000553605 TESCQ96BS2 214 aa11.46□□□□□ -0.57
PRPF39-204ENST00000553605 CCDC115Q96NT0 180 aa11.46□□□□□ -0.57
PRPF39-204ENST00000553605 MOGAT1Q96PD6 335 aa11.46□□□□□ -0.57
PRPF39-204ENST00000553605 PANX1Q96RD7 426 aa11.46□□□□□ -0.57
PRPF39-204ENST00000553605 EPYCQ99645 322 aa11.46□□□□□ -0.57
PRPF39-204ENST00000553605 TMEM246Q9BRR3 403 aa11.46□□□□□ -0.57
PRPF39-204ENST00000553605 CDADC1Q9BWV3 514 aa11.46□□□□□ -0.57
PRPF39-204ENST00000553605 CACYBPQ9HB71 228 aaKnown RBP11.46□□□□□ -0.57
PRPF39-204ENST00000553605 CLN8Q9UBY8 286 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms