RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 THOC7Q6I9Y2 204 aaKnown RBP11.64□□□□□ -0.55
SHMT2-205ENST00000553474 ANKRD16Q6P6B7 361 aa11.64□□□□□ -0.55
SHMT2-205ENST00000553474 OR11G2Q8NGC1 345 aa11.64□□□□□ -0.55
SHMT2-205ENST00000553474 NUBPLQ8TB37 319 aa11.64□□□□□ -0.55
SHMT2-205ENST00000553474 TTC9Q92623 222 aa11.64□□□□□ -0.55
SHMT2-205ENST00000553474 ZC3H10Q96K80 434 aaKnown RBP11.64□□□□□ -0.55
SHMT2-205ENST00000553474 NRSN2Q9GZP1 204 aa11.64□□□□□ -0.55
SHMT2-205ENST00000553474 SLCO1C1Q9NYB5 712 aa11.64□□□□□ -0.55
SHMT2-205ENST00000553474 CDV3Q9UKY7 258 aaKnown RBP11.64□□□□□ -0.55
SHMT2-205ENST00000553474 SLC22A23A1A5C7 686 aa11.63□□□□□ -0.55
SHMT2-205ENST00000553474 CDC14CA4D256 554 aa11.63□□□□□ -0.55
SHMT2-205ENST00000553474 ANKUB1A6NFN9 424 aa11.63□□□□□ -0.55
SHMT2-205ENST00000553474 C4orf47A7E2U8 309 aa11.63□□□□□ -0.55
SHMT2-205ENST00000553474 SNRPGP15A8MWD9 76 aa11.63□□□□□ -0.55
SHMT2-205ENST00000553474 ZNF208O43345 1280 aa11.63□□□□□ -0.55
SHMT2-205ENST00000553474 SSNA1O43805 119 aa11.63□□□□□ -0.55
SHMT2-205ENST00000553474 HLA-DQA2P01906 255 aa11.63□□□□□ -0.55
SHMT2-205ENST00000553474 IL5P05113 134 aa11.63□□□□□ -0.55
SHMT2-205ENST00000553474 SYPP08247 313 aa11.63□□□□□ -0.55
SHMT2-205ENST00000553474 CYC1P08574 325 aa11.63□□□□□ -0.55
SHMT2-205ENST00000553474 FSTP19883 344 aa11.63□□□□□ -0.55
SHMT2-205ENST00000553474 CSRP1P21291 193 aaKnown RBP11.63□□□□□ -0.55
SHMT2-205ENST00000553474 CSF2RBP32927 897 aa11.63□□□□□ -0.55
SHMT2-205ENST00000553474 APOBEC1P41238 236 aaKnown RBP11.63□□□□□ -0.55
SHMT2-205ENST00000553474 DAP3P51398 398 aaKnown RBP11.63□□□□□ -0.55
SHMT2-205ENST00000553474 RIDAP52758 137 aaKnown RBP11.63□□□□□ -0.55
SHMT2-205ENST00000553474 RNF4P78317 190 aa11.63□□□□□ -0.55
SHMT2-205ENST00000553474 ACY1Q03154 408 aa11.63□□□□□ -0.55
SHMT2-205ENST00000553474 MEP1BQ16820 701 aa11.63□□□□□ -0.55
SHMT2-205ENST00000553474 ST3GAL2Q16842 350 aa11.63□□□□□ -0.55
SHMT2-205ENST00000553474 WDR38Q5JTN6 314 aa11.63□□□□□ -0.55
SHMT2-205ENST00000553474 DEGS2Q6QHC5 323 aa11.63□□□□□ -0.55
SHMT2-205ENST00000553474 SEZ6L2Q6UXD5 910 aa11.63□□□□□ -0.55
SHMT2-205ENST00000553474 PRSS35Q8N3Z0 413 aa11.63□□□□□ -0.55
SHMT2-205ENST00000553474 SPICQ8N5J4 248 aa11.63□□□□□ -0.55
SHMT2-205ENST00000553474 OR8K3Q8NH51 312 aa11.63□□□□□ -0.55
SHMT2-205ENST00000553474 MFSD8Q8NHS3 518 aa11.63□□□□□ -0.55
SHMT2-205ENST00000553474 SLC25A36Q96CQ1 311 aa11.63□□□□□ -0.55
SHMT2-205ENST00000553474 ELOVL3Q9HB03 270 aa11.63□□□□□ -0.55
SHMT2-205ENST00000553474 GPN1Q9HCN4 374 aaPredicted RBP11.63□□□□□ -0.55
SHMT2-205ENST00000553474 CKLFQ9UBR5 152 aa11.63□□□□□ -0.55
SHMT2-205ENST00000553474 KCNG2Q9UJ96 466 aa11.63□□□□□ -0.55
SHMT2-205ENST00000553474 MGAT4AQ9UM21 535 aa11.63□□□□□ -0.55
SHMT2-205ENST00000553474 MYO15AQ9UKN7 3530 aa11.63□□□□□ -0.55
SHMT2-205ENST00000553474 GPR179Q6PRD1 2367 aa11.63□□□□□ -0.55
SHMT2-205ENST00000553474 MEGF11A6BM72 1044 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 FTCDNL1E5RQL4 147 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 C11orf98E9PRG8 122 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 H7C417 338 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 ETV2O00321 342 aaPredicted RBP11.62□□□□□ -0.55
SHMT2-205ENST00000553474 SLC17A2O00624 439 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 SLC16A7O60669 478 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 RBBP9O75884 186 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 CSF1P09603 554 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 CD37P11049 281 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 C4BPBP20851 252 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 SOX2P48431 317 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 EFNA3P52797 238 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 INSM1Q01101 510 aaPredicted RBP11.62□□□□□ -0.55
SHMT2-205ENST00000553474 C19orf57Q0VDD7 668 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 RNASE12Q5GAN4 147 aaKnown RBP11.62□□□□□ -0.55
SHMT2-205ENST00000553474 ZBTB37Q5TC79 503 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 KRT77Q7Z794 578 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 PIAS4Q8N2W9 510 aaPredicted RBP11.62□□□□□ -0.55
SHMT2-205ENST00000553474 TSEN15Q8WW01 171 aaKnown RBP11.62□□□□□ -0.55
SHMT2-205ENST00000553474 SNAPC3Q92966 411 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 C8orf44Q96CB5 159 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 ORAI1Q96D31 301 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 NXPE2Q96DL1 559 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 SMAD5Q99717 465 aaKnown RBP11.62□□□□□ -0.55
SHMT2-205ENST00000553474 ARRDC1-AS1Q9H2J1 176 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 SMOC1Q9H4F8 434 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 FANCFQ9NPI8 374 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 FSCN3Q9NQT6 498 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 B3GNT2Q9NY97 397 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 MTFP1Q9UDX5 166 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 PISDQ9UG56 409 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 SUSD2Q9UGT4 822 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 PILRBQ9UKJ0 227 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 TRAV8-7A0A075B6U6 113 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 A0A0A6YYH2 397 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 A6NJ64 397 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 PATE3B3GLJ2 98 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 AQP8O94778 261 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 NDUFB6O95139 128 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 TPOP07202 933 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 NAT2P11245 290 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 IFNGR1P15260 489 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 MSX1P28360 303 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 HTR2BP41595 481 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 KIR3DL2P43630 455 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 ARRB1P49407 418 aaPredicted RBP11.62□□□□□ -0.55
SHMT2-205ENST00000553474 CLDN12P56749 244 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 ADAM8P78325 824 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 PUDPQ08623 228 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 CAMK2DQ13557 499 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 PCK2Q16822 640 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 C1QL3Q5VWW1 255 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 TMEM71Q6P5X7 295 aa11.62□□□□□ -0.55
SHMT2-205ENST00000553474 GLDNQ6ZMI3 551 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms