RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 PPM1LQ5SGD2 360 aa3.31□□□□□ -1.88
SYNE2-210ENST00000553455 C22orf42Q6IC83 251 aa3.31□□□□□ -1.88
SYNE2-210ENST00000553455 REEP3Q6NUK4 255 aa3.31□□□□□ -1.88
SYNE2-210ENST00000553455 TMEM179Q6ZVK1 233 aa3.31□□□□□ -1.88
SYNE2-210ENST00000553455 SLC16A14Q7RTX9 510 aa3.31□□□□□ -1.88
SYNE2-210ENST00000553455 MREGQ8N565 214 aa3.31□□□□□ -1.88
SYNE2-210ENST00000553455 OR4A4PQ8NGN8 299 aa3.31□□□□□ -1.88
SYNE2-210ENST00000553455 TAAR1Q96RJ0 339 aa3.31□□□□□ -1.88
SYNE2-210ENST00000553455 SLC25A39Q9BZJ4 359 aaPredicted RBP3.31□□□□□ -1.88
SYNE2-210ENST00000553455 AKNAQ7Z591 1439 aa3.3□□□□□ -1.88
SYNE2-210ENST00000553455 CENPJQ9HC77 1338 aaPredicted RBP3.3□□□□□ -1.88
SYNE2-210ENST00000553455 TRBV9A0A0B4J1U6 114 aa3.3□□□□□ -1.88
SYNE2-210ENST00000553455 SERTM2A0A1B0GWG4 89 aa3.3□□□□□ -1.88
SYNE2-210ENST00000553455 SIRPB1O00241 398 aa3.3□□□□□ -1.88
SYNE2-210ENST00000553455 AIM2O14862 343 aa3.3□□□□□ -1.88
SYNE2-210ENST00000553455 CACNG3O60359 315 aa3.3□□□□□ -1.88
SYNE2-210ENST00000553455 DPM1O60762 260 aa3.3□□□□□ -1.88
SYNE2-210ENST00000553455 CTAG2O75638 210 aa3.3□□□□□ -1.88
SYNE2-210ENST00000553455 SLC25A27O95847 323 aa3.3□□□□□ -1.88
SYNE2-210ENST00000553455 SFTPCP11686 197 aa3.3□□□□□ -1.88
SYNE2-210ENST00000553455 ZNF250P15622 560 aa3.3□□□□□ -1.88
SYNE2-210ENST00000553455 OMGP23515 440 aa3.3□□□□□ -1.88
SYNE2-210ENST00000553455 DCKP27707 260 aa3.3□□□□□ -1.88
SYNE2-210ENST00000553455 HOXA9P31269 272 aa3.3□□□□□ -1.88
SYNE2-210ENST00000553455 C21orf59P57076 290 aa3.3□□□□□ -1.88
SYNE2-210ENST00000553455 RGS8P57771 180 aaPredicted RBP3.3□□□□□ -1.88
SYNE2-210ENST00000553455 KRTAP12-2P59991 146 aa3.3□□□□□ -1.88
SYNE2-210ENST00000553455 ADARB1P78563 741 aaKnown RBP3.3□□□□□ -1.88
SYNE2-210ENST00000553455 HMGCS1Q01581 520 aa3.3□□□□□ -1.88
SYNE2-210ENST00000553455 MECOMQ03112 1051 aa3.3□□□□□ -1.88
SYNE2-210ENST00000553455 MADCAM1Q13477 382 aa3.3□□□□□ -1.88
SYNE2-210ENST00000553455 CLINT1Q14677 625 aa3.3□□□□□ -1.88
SYNE2-210ENST00000553455 BZW1Q7L1Q6 419 aaKnown RBP3.3□□□□□ -1.88
SYNE2-210ENST00000553455 STRADAQ7RTN6 431 aa3.3□□□□□ -1.88
SYNE2-210ENST00000553455 BIVMQ86UB2 503 aa3.3□□□□□ -1.88
SYNE2-210ENST00000553455 FAM81AQ8TBF8 368 aa3.3□□□□□ -1.88
SYNE2-210ENST00000553455 EXO5Q9H790 373 aa3.3□□□□□ -1.88
SYNE2-210ENST00000553455 GCNT4Q9P109 453 aa3.3□□□□□ -1.88
SYNE2-210ENST00000553455 GOLT1BQ9Y3E0 138 aa3.3□□□□□ -1.88
SYNE2-210ENST00000553455 MRPS18BQ9Y676 258 aaKnown RBP3.3□□□□□ -1.88
SYNE2-210ENST00000553455 NACAE9PAV3 2078 aa3.3□□□□□ -1.88
SYNE2-210ENST00000553455 PIKFYVEQ9Y2I7 2098 aa3.3□□□□□ -1.88
SYNE2-210ENST00000553455 TET2Q6N021 2002 aaPredicted RBP3.29□□□□□ -1.88
SYNE2-210ENST00000553455 CIB4A0PJX0 185 aa3.29□□□□□ -1.88
SYNE2-210ENST00000553455 H0YHG0 523 aa3.29□□□□□ -1.88
SYNE2-210ENST00000553455 KMOO15229 486 aa3.29□□□□□ -1.88
SYNE2-210ENST00000553455 KLHL41O60662 606 aa3.29□□□□□ -1.88
SYNE2-210ENST00000553455 FGF4P08620 206 aa3.29□□□□□ -1.88
SYNE2-210ENST00000553455 ADRB3P13945 408 aa3.29□□□□□ -1.88
SYNE2-210ENST00000553455 SLC1A1P43005 524 aa3.29□□□□□ -1.88
SYNE2-210ENST00000553455 ATP5OP48047 213 aa3.29□□□□□ -1.88
SYNE2-210ENST00000553455 MXD1Q05195 221 aa3.29□□□□□ -1.88
SYNE2-210ENST00000553455 LIPEQ05469 1076 aa3.29□□□□□ -1.88
SYNE2-210ENST00000553455 MERTKQ12866 999 aa3.29□□□□□ -1.88
SYNE2-210ENST00000553455 DUX4L9Q6RFH8 374 aaPredicted RBP3.29□□□□□ -1.88
SYNE2-210ENST00000553455 ZNF493Q6ZR52 646 aa3.29□□□□□ -1.88
SYNE2-210ENST00000553455 CENPQQ7L2Z9 268 aaPredicted RBP3.29□□□□□ -1.88
SYNE2-210ENST00000553455 OFCC1Q8IZS5 231 aa3.29□□□□□ -1.88
SYNE2-210ENST00000553455 PRELID2Q8N945 189 aa3.29□□□□□ -1.88
SYNE2-210ENST00000553455 TSEN15Q8WW01 171 aaKnown RBP3.29□□□□□ -1.88
SYNE2-210ENST00000553455 FAM104AQ969W3 186 aa3.29□□□□□ -1.88
SYNE2-210ENST00000553455 FAM3DQ96BQ1 224 aa3.29□□□□□ -1.88
SYNE2-210ENST00000553455 ZNF285Q96NJ3 590 aa3.29□□□□□ -1.88
SYNE2-210ENST00000553455 OR5B12Q96R08 314 aa3.29□□□□□ -1.88
SYNE2-210ENST00000553455 KRTAP4-4Q9BYR3 166 aa3.29□□□□□ -1.88
SYNE2-210ENST00000553455 TMEM165Q9HC07 324 aa3.29□□□□□ -1.88
SYNE2-210ENST00000553455 PTTG3PQ9NZH4 202 aa3.29□□□□□ -1.88
SYNE2-210ENST00000553455 ST3GAL6Q9Y274 331 aa3.29□□□□□ -1.88
SYNE2-210ENST00000553455 TMED5Q9Y3A6 229 aa3.29□□□□□ -1.88
SYNE2-210ENST00000553455 ZNFX1Q9P2E3 1918 aaKnown RBP3.29□□□□□ -1.88
SYNE2-210ENST00000553455 INSRP06213 1382 aa3.28□□□□□ -1.88
SYNE2-210ENST00000553455 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.28□□□□□ -1.88
SYNE2-210ENST00000553455 A0A096LNJ9 63 aa3.28□□□□□ -1.88
SYNE2-210ENST00000553455 C11orf94C9JXX5 98 aa3.28□□□□□ -1.88
SYNE2-210ENST00000553455 NDUFAB1O14561 156 aa3.28□□□□□ -1.88
SYNE2-210ENST00000553455 DNAJB6O75190 326 aa3.28□□□□□ -1.88
SYNE2-210ENST00000553455 SRP72O76094 671 aaKnown RBP3.28□□□□□ -1.88
SYNE2-210ENST00000553455 GNAO1P09471 354 aa3.28□□□□□ -1.88
SYNE2-210ENST00000553455 ACSM4P0C7M7 580 aa3.28□□□□□ -1.88
SYNE2-210ENST00000553455 AZU1P20160 251 aa3.28□□□□□ -1.88
SYNE2-210ENST00000553455 MAS1LP35410 378 aa3.28□□□□□ -1.88
SYNE2-210ENST00000553455 CRISP1P54107 249 aa3.28□□□□□ -1.88
SYNE2-210ENST00000553455 C1orf185Q5T7R7 199 aa3.28□□□□□ -1.88
SYNE2-210ENST00000553455 ANKRD22Q5VYY1 191 aa3.28□□□□□ -1.88
SYNE2-210ENST00000553455 Q6P435 159 aa3.28□□□□□ -1.88
SYNE2-210ENST00000553455 TEX43Q6ZNM6 134 aa3.28□□□□□ -1.88
SYNE2-210ENST00000553455 C12orf56Q8IXR9 622 aa3.28□□□□□ -1.88
SYNE2-210ENST00000553455 DUSP18Q8NEJ0 188 aa3.28□□□□□ -1.88
SYNE2-210ENST00000553455 OR4S2Q8NH73 311 aa3.28□□□□□ -1.88
SYNE2-210ENST00000553455 MARCH1Q8TCQ1 289 aa3.28□□□□□ -1.88
SYNE2-210ENST00000553455 LKAAEAR1Q8TD35 194 aa3.28□□□□□ -1.88
SYNE2-210ENST00000553455 SERPINB12Q96P63 405 aa3.28□□□□□ -1.88
SYNE2-210ENST00000553455 C11orf70Q9BRQ4 267 aa3.28□□□□□ -1.88
SYNE2-210ENST00000553455 KCNJ16Q9NPI9 418 aa3.28□□□□□ -1.88
SYNE2-210ENST00000553455 HRASLS2Q9NWW9 162 aa3.28□□□□□ -1.88
SYNE2-210ENST00000553455 UXTQ9UBK9 157 aaPredicted RBP3.28□□□□□ -1.88
SYNE2-210ENST00000553455 ZNF629Q9UEG4 869 aaPredicted RBP3.28□□□□□ -1.88
SYNE2-210ENST00000553455 CD84Q9UIB8 345 aa3.28□□□□□ -1.88
SYNE2-210ENST00000553455 PSG8Q9UQ74 426 aa3.28□□□□□ -1.88
SYNE2-210ENST00000553455 LRP4O75096 1905 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms