RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 1 (best) BASIC

Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 OR2F1Q13607 317 aa15.86■□□□□ 0.13
SYNE3-202ENST00000553340 DEFB110Q30KQ9 67 aa15.86■□□□□ 0.13
SYNE3-202ENST00000553340 FAM166AQ6J272 317 aa15.86■□□□□ 0.13
SYNE3-202ENST00000553340 JMJD6Q6NYC1 403 aaPredicted RBP15.86■□□□□ 0.13
SYNE3-202ENST00000553340 LPCAT3Q6P1A2 487 aa15.86■□□□□ 0.13
SYNE3-202ENST00000553340 ZNF627Q7L945 461 aa15.86■□□□□ 0.13
SYNE3-202ENST00000553340 LMF1Q96S06 567 aa15.86■□□□□ 0.13
SYNE3-202ENST00000553340 OR10A5Q9H207 317 aa15.86■□□□□ 0.13
SYNE3-202ENST00000553340 SFXN1Q9H9B4 322 aa15.86■□□□□ 0.13
SYNE3-202ENST00000553340 SCPEP1Q9HB40 452 aa15.86■□□□□ 0.13
SYNE3-202ENST00000553340 A0A0C4DFX4 3053 aa15.86■□□□□ 0.13
SYNE3-202ENST00000553340 A0A0A6YYC8 382 aaPredicted RBP15.86■□□□□ 0.13
SYNE3-202ENST00000553340 I3L1I5 382 aaPredicted RBP15.86■□□□□ 0.13
SYNE3-202ENST00000553340 M0QYG6 137 aa15.86■□□□□ 0.13
SYNE3-202ENST00000553340 ABCD4O14678 606 aa15.86■□□□□ 0.13
SYNE3-202ENST00000553340 GPANK1O95872 356 aa15.86■□□□□ 0.13
SYNE3-202ENST00000553340 TMEM184AQ6ZMB5 413 aa15.86■□□□□ 0.13
SYNE3-202ENST00000553340 OOSP2Q86WS3 158 aa15.86■□□□□ 0.13
SYNE3-202ENST00000553340 PLPP7Q8NBV4 271 aa15.86■□□□□ 0.13
SYNE3-202ENST00000553340 OR1J4Q8NGS1 313 aa15.86■□□□□ 0.13
SYNE3-202ENST00000553340 PHOSPHO1Q8TCT1 267 aa15.86■□□□□ 0.13
SYNE3-202ENST00000553340 BMFQ96LC9 184 aa15.86■□□□□ 0.13
SYNE3-202ENST00000553340 OR8B4Q96RC9 309 aa15.86■□□□□ 0.13
SYNE3-202ENST00000553340 SLCO5A1Q9H2Y9 848 aa15.86■□□□□ 0.13
SYNE3-202ENST00000553340 CPNE7Q9UBL6 633 aa15.86■□□□□ 0.13
SYNE3-202ENST00000553340 GTF2A1LQ9UNN4 478 aa15.86■□□□□ 0.13
SYNE3-202ENST00000553340 NUP210LQ5VU65 1888 aa15.86■□□□□ 0.13
SYNE3-202ENST00000553340 A0A1B0GTI1 187 aa15.85■□□□□ 0.13
SYNE3-202ENST00000553340 FAM221BA6H8Z2 402 aa15.85■□□□□ 0.13
SYNE3-202ENST00000553340 LUMP51884 338 aaPredicted RBP15.85■□□□□ 0.13
SYNE3-202ENST00000553340 CCINQ13939 588 aa15.85■□□□□ 0.13
SYNE3-202ENST00000553340 CD226Q15762 336 aa15.85■□□□□ 0.13
SYNE3-202ENST00000553340 MEP1BQ16820 701 aa15.85■□□□□ 0.13
SYNE3-202ENST00000553340 PDSS1Q5T2R2 415 aa15.85■□□□□ 0.13
SYNE3-202ENST00000553340 FANCMQ8IYD8 2048 aa15.85■□□□□ 0.13
SYNE3-202ENST00000553340 GALNT16Q8N428 558 aa15.85■□□□□ 0.13
SYNE3-202ENST00000553340 BPIFCQ8NFQ6 507 aa15.85■□□□□ 0.13
SYNE3-202ENST00000553340 OR1J2Q8NGS2 313 aa15.85■□□□□ 0.13
SYNE3-202ENST00000553340 KTI12Q96EK9 354 aaPredicted RBP15.85■□□□□ 0.13
SYNE3-202ENST00000553340 PDCD10Q9BUL8 212 aa15.85■□□□□ 0.13
SYNE3-202ENST00000553340 NKX6-2Q9C056 277 aaPredicted RBP15.85■□□□□ 0.13
SYNE3-202ENST00000553340 TINAGL1Q9GZM7 467 aaPredicted RBP15.85■□□□□ 0.13
SYNE3-202ENST00000553340 PRTFDC1Q9NRG1 225 aa15.85■□□□□ 0.13
SYNE3-202ENST00000553340 TNFSF18Q9UNG2 199 aa15.85■□□□□ 0.13
SYNE3-202ENST00000553340 FAM74A7A6NL05 159 aa15.85■□□□□ 0.13
SYNE3-202ENST00000553340 K7EQS6 105 aa15.85■□□□□ 0.13
SYNE3-202ENST00000553340 TNFRSF10CO14798 259 aa15.85■□□□□ 0.13
SYNE3-202ENST00000553340 SIGLEC5O15389 551 aa15.85■□□□□ 0.13
SYNE3-202ENST00000553340 BCL2L11O43521 198 aa15.85■□□□□ 0.13
SYNE3-202ENST00000553340 CYB5AP00167 134 aa15.85■□□□□ 0.13
SYNE3-202ENST00000553340 HLA-DQA2P01906 255 aa15.85■□□□□ 0.13
SYNE3-202ENST00000553340 CTSBP07858 339 aa15.85■□□□□ 0.13
SYNE3-202ENST00000553340 CD34P28906 385 aa15.85■□□□□ 0.13
SYNE3-202ENST00000553340 PBX2P40425 430 aa15.85■□□□□ 0.13
SYNE3-202ENST00000553340 PPP1CAP62136 330 aa15.85■□□□□ 0.13
SYNE3-202ENST00000553340 SIGLEC14Q08ET2 396 aa15.85■□□□□ 0.13
SYNE3-202ENST00000553340 DHRS2Q13268 280 aa15.85■□□□□ 0.13
SYNE3-202ENST00000553340 SLC17A1Q14916 467 aa15.85■□□□□ 0.13
SYNE3-202ENST00000553340 FAM74A3Q4VXF1 159 aa15.85■□□□□ 0.13
SYNE3-202ENST00000553340 TMEM196Q5HYL7 178 aa15.85■□□□□ 0.13
SYNE3-202ENST00000553340 ATPAF1Q5TC12 328 aaPredicted RBP15.85■□□□□ 0.13
SYNE3-202ENST00000553340 C11orf87Q6NUJ2 197 aa15.85■□□□□ 0.13
SYNE3-202ENST00000553340 CBLN3Q6UW01 205 aa15.85■□□□□ 0.13
SYNE3-202ENST00000553340 TAF8Q7Z7C8 310 aa15.85■□□□□ 0.13
SYNE3-202ENST00000553340 CCDC36Q8IYA8 594 aa15.85■□□□□ 0.13
SYNE3-202ENST00000553340 PM20D2Q8IYS1 436 aa15.85■□□□□ 0.13
SYNE3-202ENST00000553340 ATOH1Q92858 354 aaPredicted RBP15.85■□□□□ 0.13
SYNE3-202ENST00000553340 PHYHIPLQ96FC7 376 aa15.85■□□□□ 0.13
SYNE3-202ENST00000553340 WDR13Q9H1Z4 485 aa15.85■□□□□ 0.13
SYNE3-202ENST00000553340 FAM60AQ9NP50 221 aa15.85■□□□□ 0.13
SYNE3-202ENST00000553340 CKLFQ9UBR5 152 aa15.85■□□□□ 0.13
SYNE3-202ENST00000553340 DHDHQ9UQ10 334 aa15.85■□□□□ 0.13
SYNE3-202ENST00000553340 CACNA1CQ13936 2221 aa15.85■□□□□ 0.13
SYNE3-202ENST00000553340 C5orf67F2Z3F1 127 aa15.84■□□□□ 0.13
SYNE3-202ENST00000553340 OIP5O43482 229 aa15.84■□□□□ 0.13
SYNE3-202ENST00000553340 RAD1O60671 282 aa15.84■□□□□ 0.13
SYNE3-202ENST00000553340 SLC25A4P12235 298 aa15.84■□□□□ 0.13
SYNE3-202ENST00000553340 HTR2CP28335 458 aa15.84■□□□□ 0.13
SYNE3-202ENST00000553340 NTSR1P30989 418 aa15.84■□□□□ 0.13
SYNE3-202ENST00000553340 FLI1Q01543 452 aaPredicted RBP15.84■□□□□ 0.13
SYNE3-202ENST00000553340 SRSF4Q08170 494 aaKnown RBP15.84■□□□□ 0.13
SYNE3-202ENST00000553340 SKP2Q13309 424 aa15.84■□□□□ 0.13
SYNE3-202ENST00000553340 NARS2Q96I59 477 aaKnown RBP15.84■□□□□ 0.13
SYNE3-202ENST00000553340 VRK1Q99986 396 aaPredicted RBP15.84■□□□□ 0.13
SYNE3-202ENST00000553340 UBQLN4Q9NRR5 601 aa15.84■□□□□ 0.13
SYNE3-202ENST00000553340 SLC22A13Q9Y226 551 aa15.84■□□□□ 0.13
SYNE3-202ENST00000553340 NOP16Q9Y3C1 178 aaKnown RBP15.84■□□□□ 0.13
SYNE3-202ENST00000553340 ZNF736B4DX44 427 aaPredicted RBP15.84■□□□□ 0.13
SYNE3-202ENST00000553340 CLDN4O14493 209 aa15.84■□□□□ 0.13
SYNE3-202ENST00000553340 IGLV3-21P80748 117 aaPredicted RBP15.84■□□□□ 0.13
SYNE3-202ENST00000553340 FUT7Q11130 342 aa15.84■□□□□ 0.13
SYNE3-202ENST00000553340 ERV3-1Q14264 604 aa15.84■□□□□ 0.13
SYNE3-202ENST00000553340 NR0B2Q15466 257 aa15.84■□□□□ 0.13
SYNE3-202ENST00000553340 TAF13Q15543 124 aa15.84■□□□□ 0.13
SYNE3-202ENST00000553340 ALG11Q2TAA5 492 aa15.84■□□□□ 0.13
SYNE3-202ENST00000553340 FNDC7Q5VTL7 733 aa15.84■□□□□ 0.13
SYNE3-202ENST00000553340 TMEM225Q6GV28 225 aa15.84■□□□□ 0.13
SYNE3-202ENST00000553340 MED25Q71SY5 747 aa15.84■□□□□ 0.13
SYNE3-202ENST00000553340 ASB17Q8WXJ9 295 aa15.84■□□□□ 0.13
SYNE3-202ENST00000553340 SLC25A28Q96A46 364 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms