RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 VPS33AQ96AX1 596 aa10.79□□□□□ -0.68
VPS29-211ENST00000553128 POM121L2Q96KW2 1035 aa10.79□□□□□ -0.68
VPS29-211ENST00000553128 OR52E6Q96RD3 313 aa10.79□□□□□ -0.68
VPS29-211ENST00000553128 WFDC6Q9BQY6 131 aa10.79□□□□□ -0.68
VPS29-211ENST00000553128 SSBP3Q9BWW4 388 aaPredicted RBP10.79□□□□□ -0.68
VPS29-211ENST00000553128 MKS1Q9NXB0 559 aa10.79□□□□□ -0.68
VPS29-211ENST00000553128 CALML5Q9NZT1 146 aa10.79□□□□□ -0.68
VPS29-211ENST00000553128 IL20RAQ9UHF4 553 aa10.79□□□□□ -0.68
VPS29-211ENST00000553128 C5orf49A4QMS7 147 aa10.78□□□□□ -0.68
VPS29-211ENST00000553128 KRT75O95678 551 aa10.78□□□□□ -0.68
VPS29-211ENST00000553128 PTHP01270 115 aa10.78□□□□□ -0.68
VPS29-211ENST00000553128 PGA4P0DJD7 388 aa10.78□□□□□ -0.68
VPS29-211ENST00000553128 PGA3P0DJD8 388 aa10.78□□□□□ -0.68
VPS29-211ENST00000553128 ADORA3P0DMS8 318 aa10.78□□□□□ -0.68
VPS29-211ENST00000553128 STOMP27105 288 aa10.78□□□□□ -0.68
VPS29-211ENST00000553128 FGF12P61328 243 aa10.78□□□□□ -0.68
VPS29-211ENST00000553128 HSF2Q03933 536 aa10.78□□□□□ -0.68
VPS29-211ENST00000553128 PLP2Q04941 152 aa10.78□□□□□ -0.68
VPS29-211ENST00000553128 FAM205BPQ63HN1 556 aa10.78□□□□□ -0.68
VPS29-211ENST00000553128 BTNL3Q6UXE8 466 aa10.78□□□□□ -0.68
VPS29-211ENST00000553128 ZNF620Q6ZNG0 422 aa10.78□□□□□ -0.68
VPS29-211ENST00000553128 Q6ZR03 302 aa10.78□□□□□ -0.68
VPS29-211ENST00000553128 C10orf53Q8N6V4 93 aa10.78□□□□□ -0.68
VPS29-211ENST00000553128 AKR7LQ8NHP1 331 aa10.78□□□□□ -0.68
VPS29-211ENST00000553128 MRAPQ8TCY5 172 aa10.78□□□□□ -0.68
VPS29-211ENST00000553128 TCP10LQ8TDR4 215 aa10.78□□□□□ -0.68
VPS29-211ENST00000553128 ZNF566Q969W8 418 aa10.78□□□□□ -0.68
VPS29-211ENST00000553128 SLC30A2Q9BRI3 323 aa10.78□□□□□ -0.68
VPS29-211ENST00000553128 C20orf27Q9GZN8 174 aa10.78□□□□□ -0.68
VPS29-211ENST00000553128 LRMDAQ9H2I8 198 aa10.78□□□□□ -0.68
VPS29-211ENST00000553128 ARMC7Q9H6L4 198 aa10.78□□□□□ -0.68
VPS29-211ENST00000553128 GRPEL1Q9HAV7 217 aa10.78□□□□□ -0.68
VPS29-211ENST00000553128 NOX4Q9NPH5 578 aa10.78□□□□□ -0.68
VPS29-211ENST00000553128 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.78□□□□□ -0.68
VPS29-211ENST00000553128 CYSLTR2Q9NS75 346 aa10.78□□□□□ -0.68
VPS29-211ENST00000553128 ZDHHC8Q9ULC8 765 aa10.78□□□□□ -0.68
VPS29-211ENST00000553128 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.78□□□□□ -0.68
VPS29-211ENST00000553128 LRCH1Q9Y2L9 728 aa10.78□□□□□ -0.68
VPS29-211ENST00000553128 IFT52Q9Y366 437 aa10.78□□□□□ -0.68
VPS29-211ENST00000553128 KIR2DS1A0A191URI9 304 aa10.77□□□□□ -0.69
VPS29-211ENST00000553128 RFXANKO14593 260 aa10.77□□□□□ -0.69
VPS29-211ENST00000553128 MGRN1O60291 552 aa10.77□□□□□ -0.69
VPS29-211ENST00000553128 GPR137BO60478 399 aa10.77□□□□□ -0.69
VPS29-211ENST00000553128 TPST1O60507 370 aa10.77□□□□□ -0.69
VPS29-211ENST00000553128 TPST2O60704 377 aa10.77□□□□□ -0.69
VPS29-211ENST00000553128 ERLIN1O75477 346 aa10.77□□□□□ -0.69
VPS29-211ENST00000553128 IGHV4-59P01825 116 aa10.77□□□□□ -0.69
VPS29-211ENST00000553128 CSF1P09603 554 aa10.77□□□□□ -0.69
VPS29-211ENST00000553128 MYZAPP0CAP1 466 aa10.77□□□□□ -0.69
VPS29-211ENST00000553128 MDH2P40926 338 aaKnown RBP10.77□□□□□ -0.69
VPS29-211ENST00000553128 CDK5R2Q13319 367 aa10.77□□□□□ -0.69
VPS29-211ENST00000553128 C2orf68Q2NKX9 166 aa10.77□□□□□ -0.69
VPS29-211ENST00000553128 ULK3Q6PHR2 472 aa10.77□□□□□ -0.69
VPS29-211ENST00000553128 Q6ZSV7 163 aa10.77□□□□□ -0.69
VPS29-211ENST00000553128 KLBQ86Z14 1044 aa10.77□□□□□ -0.69
VPS29-211ENST00000553128 C1orf174Q8IYL3 243 aa10.77□□□□□ -0.69
VPS29-211ENST00000553128 TMEM86BQ8N661 226 aa10.77□□□□□ -0.69
VPS29-211ENST00000553128 OR5J2Q8NH18 312 aa10.77□□□□□ -0.69
VPS29-211ENST00000553128 ABHD4Q8TB40 342 aa10.77□□□□□ -0.69
VPS29-211ENST00000553128 DNAJA4Q8WW22 397 aaPredicted RBP10.77□□□□□ -0.69
VPS29-211ENST00000553128 ITLN1Q8WWA0 313 aa10.77□□□□□ -0.69
VPS29-211ENST00000553128 SLC35B4Q969S0 331 aa10.77□□□□□ -0.69
VPS29-211ENST00000553128 MCHR2Q969V1 340 aa10.77□□□□□ -0.69
VPS29-211ENST00000553128 SLC25A44Q96H78 314 aaPredicted RBP10.77□□□□□ -0.69
VPS29-211ENST00000553128 SAMD8Q96LT4 415 aa10.77□□□□□ -0.69
VPS29-211ENST00000553128 ZIM3Q96PE6 472 aa10.77□□□□□ -0.69
VPS29-211ENST00000553128 ZNF347Q96SE7 839 aa10.77□□□□□ -0.69
VPS29-211ENST00000553128 POFUT1Q9H488 388 aa10.77□□□□□ -0.69
VPS29-211ENST00000553128 NANOGQ9H9S0 305 aa10.77□□□□□ -0.69
VPS29-211ENST00000553128 TAS2R5Q9NYW4 299 aa10.77□□□□□ -0.69
VPS29-211ENST00000553128 A0A0B4J2E0 115 aa10.76□□□□□ -0.69
VPS29-211ENST00000553128 A0A1B0GX12 115 aa10.76□□□□□ -0.69
VPS29-211ENST00000553128 C5orf63A6NC05 138 aa10.76□□□□□ -0.69
VPS29-211ENST00000553128 TMEM178BH3BS89 294 aa10.76□□□□□ -0.69
VPS29-211ENST00000553128 BPGMP07738 259 aa10.76□□□□□ -0.69
VPS29-211ENST00000553128 SFTPBP07988 381 aa10.76□□□□□ -0.69
VPS29-211ENST00000553128 RPS2P15880 293 aaKnown RBP10.76□□□□□ -0.69
VPS29-211ENST00000553128 ZNF32P17041 273 aa10.76□□□□□ -0.69
VPS29-211ENST00000553128 LBPP18428 481 aa10.76□□□□□ -0.69
VPS29-211ENST00000553128 CDAP32320 146 aa10.76□□□□□ -0.69
VPS29-211ENST00000553128 PPP1CBP62140 327 aa10.76□□□□□ -0.69
VPS29-211ENST00000553128 PSG7Q13046 419 aa10.76□□□□□ -0.69
VPS29-211ENST00000553128 MTX3Q5HYI7 312 aa10.76□□□□□ -0.69
VPS29-211ENST00000553128 VAX1Q5SQQ9 334 aa10.76□□□□□ -0.69
VPS29-211ENST00000553128 DPPA2Q7Z7J5 298 aa10.76□□□□□ -0.69
VPS29-211ENST00000553128 FITM2Q8N6M3 262 aa10.76□□□□□ -0.69
VPS29-211ENST00000553128 HIPK4Q8NE63 616 aa10.76□□□□□ -0.69
VPS29-211ENST00000553128 OR2Z1Q8NG97 314 aa10.76□□□□□ -0.69
VPS29-211ENST00000553128 UBLCP1Q8WVY7 318 aaPredicted RBP10.76□□□□□ -0.69
VPS29-211ENST00000553128 DYRK2Q92630 601 aa10.76□□□□□ -0.69
VPS29-211ENST00000553128 SLC47A1Q96FL8 570 aa10.76□□□□□ -0.69
VPS29-211ENST00000553128 PKNOX2Q96KN3 472 aa10.76□□□□□ -0.69
VPS29-211ENST00000553128 EPYCQ99645 322 aa10.76□□□□□ -0.69
VPS29-211ENST00000553128 NUDT16L1Q9BRJ7 211 aaKnown RBP10.76□□□□□ -0.69
VPS29-211ENST00000553128 CDADC1Q9BWV3 514 aa10.76□□□□□ -0.69
VPS29-211ENST00000553128 NUF2Q9BZD4 464 aa10.76□□□□□ -0.69
VPS29-211ENST00000553128 TPT1P8Q9HAU6 139 aa10.76□□□□□ -0.69
VPS29-211ENST00000553128 TMEM165Q9HC07 324 aa10.76□□□□□ -0.69
VPS29-211ENST00000553128 BCL2L10Q9HD36 194 aa10.76□□□□□ -0.69
VPS29-211ENST00000553128 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms