RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 KIR2DS4P43632 304 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 ZNF81P51508 661 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 SLC35A2P78381 396 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 ROR2Q01974 943 aaKnown RBP4.3□□□□□ -1.72
CKAP4-203ENST00000553039 PIGFQ07326 219 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 ACSM2AQ08AH3 577 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 CAMK2DQ13557 499 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 NFYCQ13952 458 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 GSG1Q2KHT4 349 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 FAM83EQ2M2I3 478 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 ALKBH6Q3KRA9 238 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 FAM153CQ494X1 144 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 SPIN4Q56A73 249 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 FAM69AQ5T7M9 428 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 ACSM2BQ68CK6 577 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 CDC73Q6P1J9 531 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 TRMT10BQ6PF06 316 aaKnown RBP4.3□□□□□ -1.72
CKAP4-203ENST00000553039 RAPH1Q70E73 1250 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 GOLGA7Q7Z5G4 137 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 CCDC91Q7Z6B0 441 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 GPAT4Q86UL3 456 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 MDP1Q86V88 176 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 NDUFA11Q86Y39 141 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 DDIASQ8IXT1 998 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 MUC20Q8N307 709 aaPredicted RBP4.3□□□□□ -1.72
CKAP4-203ENST00000553039 GPR137CQ8N3F9 429 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 POU5F2Q8N7G0 328 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 PTGR2Q8N8N7 351 aaPredicted RBP4.3□□□□□ -1.72
CKAP4-203ENST00000553039 C11orf44Q8N8P7 122 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 ZIC4Q8N9L1 334 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 NUDT10Q8NFP7 164 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 OR9K2Q8NGE7 335 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 ZFP28Q8NHY6 868 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 ZNF519Q8TB69 540 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 FBXO25Q8TCJ0 367 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 UBLCP1Q8WVY7 318 aaPredicted RBP4.3□□□□□ -1.72
CKAP4-203ENST00000553039 CDKL2Q92772 493 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 CFAP36Q96G28 342 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 NUDT11Q96G61 164 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 ZNF385AQ96PM9 386 aaKnown RBP4.3□□□□□ -1.72
CKAP4-203ENST00000553039 GPHA2Q96T91 129 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 KLHDC3Q9BQ90 382 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 SSBP3Q9BWW4 388 aaPredicted RBP4.3□□□□□ -1.72
CKAP4-203ENST00000553039 SLC19A3Q9BZV2 496 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 LRMDAQ9H2I8 198 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 GLIPR2Q9H4G4 154 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 SEC61A2Q9H9S3 476 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 PLEKHA2Q9HB19 425 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 ZDHHC18Q9NUE0 388 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 ACOXLQ9NUZ1 547 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 MRGBPQ9NV56 204 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 MRPS18AQ9NVS2 196 aaKnown RBP4.3□□□□□ -1.72
CKAP4-203ENST00000553039 GAR1Q9NY12 217 aaKnown RBP4.3□□□□□ -1.72
CKAP4-203ENST00000553039 MIOXQ9UGB7 285 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 BAG5Q9UL15 447 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 FZR1Q9UM11 496 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 ARHGAP32A7KAX9 2087 aa4.3□□□□□ -1.72
CKAP4-203ENST00000553039 IGLV3-9A0A075B6K5 115 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 IGHV2-70DA0A0C4DH43 119 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 CDHR4A6H8M9 788 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 PTGES3LE9PB15 166 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 DNALI1O14645 258 aaPredicted RBP4.29□□□□□ -1.72
CKAP4-203ENST00000553039 ZNF208O43345 1280 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 PCDH7O60245 1069 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 ENTPD5O75356 428 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 RSL1D1O76021 490 aaKnown RBP4.29□□□□□ -1.72
CKAP4-203ENST00000553039 WISP3O95389 354 aaPredicted RBP4.29□□□□□ -1.72
CKAP4-203ENST00000553039 OTCP00480 354 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 PDYNP01213 254 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 PTHP01270 115 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 IGHV4-59P01825 116 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 KRT6AP02538 564 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 KRT6BP04259 564 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 LCKP06239 509 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 GPIP06744 558 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 KRT16P08779 473 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 QDPRP09417 244 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 ANXA4P09525 319 aaPredicted RBP4.29□□□□□ -1.72
CKAP4-203ENST00000553039 UROSP10746 265 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 HSD17B3P37058 310 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 MDH2P40926 338 aaKnown RBP4.29□□□□□ -1.72
CKAP4-203ENST00000553039 ELK3P41970 407 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 KRT6CP48668 564 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 IFFO1Q0D2I5 559 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 ARHGAP11BQ3KRB8 267 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 GGTA1PQ4G0N0 100 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 ZMAT1Q5H9K5 638 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 STEAP4Q687X5 459 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 GPR139Q6DWJ6 353 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 NIPAL3Q6P499 406 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 KLC3Q6P597 504 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 UNQ6126/PRO20091Q6UXV3 157 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 TRMT10CQ7L0Y3 403 aaKnown RBP4.29□□□□□ -1.72
CKAP4-203ENST00000553039 EIF3MQ7L2H7 374 aaKnown RBP4.29□□□□□ -1.72
CKAP4-203ENST00000553039 GRINAQ7Z429 371 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 CROCCP2Q86T23 111 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 COMTD1Q86VU5 262 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 SPARTQ8N0X7 666 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 ZNF614Q8N883 585 aa4.29□□□□□ -1.72
CKAP4-203ENST00000553039 SCCPDHQ8NBX0 429 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms