RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 HIST1H2ACQ93077 130 aa11.68□□□□□ -0.54
NUP188-211ENST00000550219 IL20Q9NYY1 176 aa11.68□□□□□ -0.54
NUP188-211ENST00000550219 B3GAT1Q9P2W7 334 aa11.68□□□□□ -0.54
NUP188-211ENST00000550219 RASD1Q9Y272 281 aa11.68□□□□□ -0.54
NUP188-211ENST00000550219 POFUT2Q9Y2G5 429 aa11.68□□□□□ -0.54
NUP188-211ENST00000550219 PMF1-BGLAPU3KQ54 211 aa11.68□□□□□ -0.54
NUP188-211ENST00000550219 JMJD1CQ15652 2540 aa11.67□□□□□ -0.54
NUP188-211ENST00000550219 TRAV27A0A087WT01 109 aa11.67□□□□□ -0.54
NUP188-211ENST00000550219 A0A096LPE4 126 aa11.67□□□□□ -0.54
NUP188-211ENST00000550219 IGHV1-18A0A0C4DH31 117 aa11.67□□□□□ -0.54
NUP188-211ENST00000550219 A0A1W2PPZ6 126 aa11.67□□□□□ -0.54
NUP188-211ENST00000550219 E9PQ18 207 aa11.67□□□□□ -0.54
NUP188-211ENST00000550219 MITFO75030 526 aaPredicted RBP11.67□□□□□ -0.54
NUP188-211ENST00000550219 VAMP5O95183 116 aa11.67□□□□□ -0.54
NUP188-211ENST00000550219 IFNA2P01563 188 aa11.67□□□□□ -0.54
NUP188-211ENST00000550219 OSMP13725 252 aa11.67□□□□□ -0.54
NUP188-211ENST00000550219 APOBEC3AP31941 199 aaPredicted RBP11.67□□□□□ -0.54
NUP188-211ENST00000550219 AQP2P41181 271 aa11.67□□□□□ -0.54
NUP188-211ENST00000550219 IL1RL1Q01638 556 aa11.67□□□□□ -0.54
NUP188-211ENST00000550219 RPL18Q07020 188 aaKnown RBP11.67□□□□□ -0.54
NUP188-211ENST00000550219 PUDPQ08623 228 aa11.67□□□□□ -0.54
NUP188-211ENST00000550219 RFX4Q33E94 735 aa11.67□□□□□ -0.54
NUP188-211ENST00000550219 VHLLQ6RSH7 139 aa11.67□□□□□ -0.54
NUP188-211ENST00000550219 CREB3L2Q70SY1 520 aa11.67□□□□□ -0.54
NUP188-211ENST00000550219 NANOGNBQ7Z5D8 188 aa11.67□□□□□ -0.54
NUP188-211ENST00000550219 KDM8Q8N371 416 aa11.67□□□□□ -0.54
NUP188-211ENST00000550219 OR10H5Q8NGA6 315 aa11.67□□□□□ -0.54
NUP188-211ENST00000550219 OR1K1Q8NGR3 316 aa11.67□□□□□ -0.54
NUP188-211ENST00000550219 OR51A7Q8NH64 312 aa11.67□□□□□ -0.54
NUP188-211ENST00000550219 MOSPD2Q8NHP6 518 aa11.67□□□□□ -0.54
NUP188-211ENST00000550219 MAGEE2Q8TD90 523 aaPredicted RBP11.67□□□□□ -0.54
NUP188-211ENST00000550219 GPX7Q96SL4 187 aaPredicted RBP11.67□□□□□ -0.54
NUP188-211ENST00000550219 PAPOLBQ9NRJ5 636 aaKnown RBP11.67□□□□□ -0.54
NUP188-211ENST00000550219 KRT84Q9NSB2 600 aa11.67□□□□□ -0.54
NUP188-211ENST00000550219 KIF17Q9P2E2 1029 aa11.67□□□□□ -0.54
NUP188-211ENST00000550219 FKBP7Q9Y680 259 aa11.67□□□□□ -0.54
NUP188-211ENST00000550219 CDH10Q9Y6N8 788 aa11.67□□□□□ -0.54
NUP188-211ENST00000550219 CADP27708 2225 aa11.67□□□□□ -0.54
NUP188-211ENST00000550219 NPIPB13A6NJU9 1138 aa11.66□□□□□ -0.54
NUP188-211ENST00000550219 NPIPB4C9JG80 1138 aa11.66□□□□□ -0.54
NUP188-211ENST00000550219 BLOC1S5-TXNDC5H3BN57 136 aa11.66□□□□□ -0.54
NUP188-211ENST00000550219 DLGAP1O14490 977 aa11.66□□□□□ -0.54
NUP188-211ENST00000550219 UPK3AO75631 287 aa11.66□□□□□ -0.54
NUP188-211ENST00000550219 NDUFB2O95178 105 aa11.66□□□□□ -0.54
NUP188-211ENST00000550219 ADORA3P0DMS8 318 aa11.66□□□□□ -0.54
NUP188-211ENST00000550219 IGFBP5P24593 272 aa11.66□□□□□ -0.54
NUP188-211ENST00000550219 PTDSS1P48651 473 aaKnown RBP11.66□□□□□ -0.54
NUP188-211ENST00000550219 EFNA4P52798 201 aa11.66□□□□□ -0.54
NUP188-211ENST00000550219 CLDN17P56750 224 aa11.66□□□□□ -0.54
NUP188-211ENST00000550219 SNRPD2P62316 118 aaKnown RBP11.66□□□□□ -0.54
NUP188-211ENST00000550219 ESRRGP62508 458 aa11.66□□□□□ -0.54
NUP188-211ENST00000550219 LOXL1Q08397 574 aaPredicted RBP11.66□□□□□ -0.54
NUP188-211ENST00000550219 GGTLC2Q14390 218 aa11.66□□□□□ -0.54
NUP188-211ENST00000550219 LRRC36Q1X8D7 754 aa11.66□□□□□ -0.54
NUP188-211ENST00000550219 RPL13AP3Q6NVV1 102 aa11.66□□□□□ -0.54
NUP188-211ENST00000550219 SMARCD3Q6STE5 483 aa11.66□□□□□ -0.54
NUP188-211ENST00000550219 THSD4Q6ZMP0 1018 aa11.66□□□□□ -0.54
NUP188-211ENST00000550219 LINGO2Q7L985 606 aa11.66□□□□□ -0.54
NUP188-211ENST00000550219 PXKQ7Z7A4 578 aa11.66□□□□□ -0.54
NUP188-211ENST00000550219 C10orf105Q8TEF2 133 aa11.66□□□□□ -0.54
NUP188-211ENST00000550219 NANOS1Q8WY41 292 aaKnown RBP11.66□□□□□ -0.54
NUP188-211ENST00000550219 RDH12Q96NR8 316 aa11.66□□□□□ -0.54
NUP188-211ENST00000550219 OXGR1Q96P68 337 aa11.66□□□□□ -0.54
NUP188-211ENST00000550219 SORCS2Q96PQ0 1159 aa11.66□□□□□ -0.54
NUP188-211ENST00000550219 SLC38A2Q96QD8 506 aa11.66□□□□□ -0.54
NUP188-211ENST00000550219 KCNK17Q96T54 332 aa11.66□□□□□ -0.54
NUP188-211ENST00000550219 GABARAPL3Q9BY60 117 aa11.66□□□□□ -0.54
NUP188-211ENST00000550219 OR52D1Q9H346 318 aa11.66□□□□□ -0.54
NUP188-211ENST00000550219 ENOPH1Q9UHY7 261 aa11.66□□□□□ -0.54
NUP188-211ENST00000550219 ANK3Q12955 4377 aaKnown RBP11.65□□□□□ -0.54
NUP188-211ENST00000550219 H0YJX3 145 aa11.65□□□□□ -0.54
NUP188-211ENST00000550219 OR6A2O95222 327 aa11.65□□□□□ -0.54
NUP188-211ENST00000550219 IGFBP1P08833 259 aaPredicted RBP11.65□□□□□ -0.54
NUP188-211ENST00000550219 CSF3P09919 207 aa11.65□□□□□ -0.54
NUP188-211ENST00000550219 CRISP1P54107 249 aa11.65□□□□□ -0.54
NUP188-211ENST00000550219 ROR2Q01974 943 aaKnown RBP11.65□□□□□ -0.54
NUP188-211ENST00000550219 ALG10Q5BKT4 473 aa11.65□□□□□ -0.54
NUP188-211ENST00000550219 DPY19L2P2Q6ZN68 376 aa11.65□□□□□ -0.54
NUP188-211ENST00000550219 GALNT4Q8N4A0 578 aa11.65□□□□□ -0.54
NUP188-211ENST00000550219 ANKK1Q8NFD2 765 aa11.65□□□□□ -0.54
NUP188-211ENST00000550219 OR8D4Q8NGM9 314 aa11.65□□□□□ -0.54
NUP188-211ENST00000550219 SPATA3Q8NHX4 192 aa11.65□□□□□ -0.54
NUP188-211ENST00000550219 FANK1Q8TC84 345 aa11.65□□□□□ -0.54
NUP188-211ENST00000550219 SAMD8Q96LT4 415 aa11.65□□□□□ -0.54
NUP188-211ENST00000550219 VRK1Q99986 396 aaPredicted RBP11.65□□□□□ -0.54
NUP188-211ENST00000550219 PLA2G12AQ9BZM1 189 aa11.65□□□□□ -0.54
NUP188-211ENST00000550219 EGLN3Q9H6Z9 239 aa11.65□□□□□ -0.54
NUP188-211ENST00000550219 CHODLQ9H9P2 273 aa11.65□□□□□ -0.54
NUP188-211ENST00000550219 SEC61A2Q9H9S3 476 aa11.65□□□□□ -0.54
NUP188-211ENST00000550219 OBP2BQ9NPH6 170 aa11.65□□□□□ -0.54
NUP188-211ENST00000550219 NOX1Q9Y5S8 564 aa11.65□□□□□ -0.54
NUP188-211ENST00000550219 MCIDASD6RGH6 385 aa11.64□□□□□ -0.55
NUP188-211ENST00000550219 BHLHE40O14503 412 aa11.64□□□□□ -0.55
NUP188-211ENST00000550219 SEC14L2O76054 403 aa11.64□□□□□ -0.55
NUP188-211ENST00000550219 SOX14O95416 240 aa11.64□□□□□ -0.55
NUP188-211ENST00000550219 IGHMP01871 453 aa11.64□□□□□ -0.55
NUP188-211ENST00000550219 CRYAAP02489 173 aa11.64□□□□□ -0.55
NUP188-211ENST00000550219 CD14P08571 375 aa11.64□□□□□ -0.55
NUP188-211ENST00000550219 CECR9P0C854 216 aa11.64□□□□□ -0.55
NUP188-211ENST00000550219 IGHV4-31P0DP07 118 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms