RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 M0QX08 132 aa10.95□□□□□ -0.66
PTCH1-218ENST00000548945 PLPP2O43688 288 aa10.95□□□□□ -0.66
PTCH1-218ENST00000548945 CDC14BO60729 498 aa10.95□□□□□ -0.66
PTCH1-218ENST00000548945 MPZL1O95297 269 aa10.95□□□□□ -0.66
PTCH1-218ENST00000548945 IGF2P01344 180 aa10.95□□□□□ -0.66
PTCH1-218ENST00000548945 IGHV2-5P01817 119 aa10.95□□□□□ -0.66
PTCH1-218ENST00000548945 THY1P04216 161 aa10.95□□□□□ -0.66
PTCH1-218ENST00000548945 MMP7P09237 267 aaPredicted RBP10.95□□□□□ -0.66
PTCH1-218ENST00000548945 CCL2P13500 99 aa10.95□□□□□ -0.66
PTCH1-218ENST00000548945 CLRN1P58418 232 aa10.95□□□□□ -0.66
PTCH1-218ENST00000548945 MELKQ14680 651 aa10.95□□□□□ -0.66
PTCH1-218ENST00000548945 CYP51A1Q16850 503 aa10.95□□□□□ -0.66
PTCH1-218ENST00000548945 ALKBH6Q3KRA9 238 aa10.95□□□□□ -0.66
PTCH1-218ENST00000548945 C10orf128Q5T292 105 aa10.95□□□□□ -0.66
PTCH1-218ENST00000548945 UNQ6126/PRO20091Q6UXV3 157 aa10.95□□□□□ -0.66
PTCH1-218ENST00000548945 NANOGNBQ7Z5D8 188 aa10.95□□□□□ -0.66
PTCH1-218ENST00000548945 LRRC17Q8N6Y2 441 aa10.95□□□□□ -0.66
PTCH1-218ENST00000548945 C3orf56Q8N813 242 aa10.95□□□□□ -0.66
PTCH1-218ENST00000548945 RASSF5Q8WWW0 418 aa10.95□□□□□ -0.66
PTCH1-218ENST00000548945 STON2Q8WXE9 905 aa10.95□□□□□ -0.66
PTCH1-218ENST00000548945 RAB1CQ92928 201 aa10.95□□□□□ -0.66
PTCH1-218ENST00000548945 MCHR2Q969V1 340 aa10.95□□□□□ -0.66
PTCH1-218ENST00000548945 THOC1Q96FV9 657 aaKnown RBP10.95□□□□□ -0.66
PTCH1-218ENST00000548945 TIMD4Q96H15 378 aa10.95□□□□□ -0.66
PTCH1-218ENST00000548945 TSPAN32Q96QS1 320 aa10.95□□□□□ -0.66
PTCH1-218ENST00000548945 SUCNR1Q9BXA5 334 aa10.95□□□□□ -0.66
PTCH1-218ENST00000548945 TMPRSS13Q9BYE2 586 aa10.95□□□□□ -0.66
PTCH1-218ENST00000548945 SAP30LQ9HAJ7 183 aa10.95□□□□□ -0.66
PTCH1-218ENST00000548945 DECR2Q9NUI1 292 aa10.95□□□□□ -0.66
PTCH1-218ENST00000548945 STX18Q9P2W9 335 aaKnown RBP10.95□□□□□ -0.66
PTCH1-218ENST00000548945 SLC7A7Q9UM01 511 aa10.95□□□□□ -0.66
PTCH1-218ENST00000548945 LOC105371242A0A075B767 164 aa10.94□□□□□ -0.66
PTCH1-218ENST00000548945 A0A1W2PRG6 482 aa10.94□□□□□ -0.66
PTCH1-218ENST00000548945 NPIPB13A6NJU9 1138 aa10.94□□□□□ -0.66
PTCH1-218ENST00000548945 NPIPB4C9JG80 1138 aa10.94□□□□□ -0.66
PTCH1-218ENST00000548945 AVPP01185 164 aa10.94□□□□□ -0.66
PTCH1-218ENST00000548945 UMPSP11172 480 aa10.94□□□□□ -0.66
PTCH1-218ENST00000548945 CD247P20963 164 aa10.94□□□□□ -0.66
PTCH1-218ENST00000548945 PCGF2P35227 344 aa10.94□□□□□ -0.66
PTCH1-218ENST00000548945 APLNRP35414 380 aa10.94□□□□□ -0.66
PTCH1-218ENST00000548945 DAP3P51398 398 aaKnown RBP10.94□□□□□ -0.66
PTCH1-218ENST00000548945 ERVS71-1P61550 626 aa10.94□□□□□ -0.66
PTCH1-218ENST00000548945 MRPS34P82930 218 aaKnown RBP10.94□□□□□ -0.66
PTCH1-218ENST00000548945 MVKQ03426 396 aa10.94□□□□□ -0.66
PTCH1-218ENST00000548945 SF3A3Q12874 501 aaKnown RBP eCLIP10.94□□□□□ -0.66
PTCH1-218ENST00000548945 HFEQ30201 348 aa10.94□□□□□ -0.66
PTCH1-218ENST00000548945 INTS11Q5TA45 600 aaKnown RBP10.94□□□□□ -0.66
PTCH1-218ENST00000548945 THSD4Q6ZMP0 1018 aa10.94□□□□□ -0.66
PTCH1-218ENST00000548945 USP51Q70EK9 711 aa10.94□□□□□ -0.66
PTCH1-218ENST00000548945 DHDDSQ86SQ9 333 aa10.94□□□□□ -0.66
PTCH1-218ENST00000548945 CPEB3Q8NE35 698 aaKnown RBP10.94□□□□□ -0.66
PTCH1-218ENST00000548945 NOXO1Q8NFA2 376 aa10.94□□□□□ -0.66
PTCH1-218ENST00000548945 NANPQ8TBE9 248 aa10.94□□□□□ -0.66
PTCH1-218ENST00000548945 TSPEARQ8WU66 669 aa10.94□□□□□ -0.66
PTCH1-218ENST00000548945 ELMOD3Q96FG2 381 aa10.94□□□□□ -0.66
PTCH1-218ENST00000548945 ZNF347Q96SE7 839 aa10.94□□□□□ -0.66
PTCH1-218ENST00000548945 CGREF1Q99674 301 aa10.94□□□□□ -0.66
PTCH1-218ENST00000548945 TMEM120AQ9BXJ8 343 aa10.94□□□□□ -0.66
PTCH1-218ENST00000548945 KCNN2Q9H2S1 579 aa10.94□□□□□ -0.66
PTCH1-218ENST00000548945 KAT8Q9H7Z6 458 aaKnown RBP10.94□□□□□ -0.66
PTCH1-218ENST00000548945 SIAEQ9HAT2 523 aa10.94□□□□□ -0.66
PTCH1-218ENST00000548945 SMURF2Q9HAU4 748 aa10.94□□□□□ -0.66
PTCH1-218ENST00000548945 MEPEQ9NQ76 525 aaPredicted RBP10.94□□□□□ -0.66
PTCH1-218ENST00000548945 WIPI2Q9Y4P8 454 aa10.94□□□□□ -0.66
PTCH1-218ENST00000548945 TGP01266 2768 aa10.94□□□□□ -0.66
PTCH1-218ENST00000548945 DOCK11Q5JSL3 2073 aa10.93□□□□□ -0.66
PTCH1-218ENST00000548945 MCIDASD6RGH6 385 aa10.93□□□□□ -0.66
PTCH1-218ENST00000548945 BLOC1S5-TXNDC5H3BN57 136 aa10.93□□□□□ -0.66
PTCH1-218ENST00000548945 H3BSA7 217 aa10.93□□□□□ -0.66
PTCH1-218ENST00000548945 EBAG9O00559 213 aa10.93□□□□□ -0.66
PTCH1-218ENST00000548945 KPNA4O00629 521 aaPredicted RBP10.93□□□□□ -0.66
PTCH1-218ENST00000548945 TPD52L2O43399 206 aaKnown RBP10.93□□□□□ -0.66
PTCH1-218ENST00000548945 DCTN3O75935 186 aa10.93□□□□□ -0.66
PTCH1-218ENST00000548945 MT-ND1P03886 318 aa10.93□□□□□ -0.66
PTCH1-218ENST00000548945 OPN1SWP03999 348 aa10.93□□□□□ -0.66
PTCH1-218ENST00000548945 ADH4P08319 380 aa10.93□□□□□ -0.66
PTCH1-218ENST00000548945 TSPAN19P0C672 248 aa10.93□□□□□ -0.66
PTCH1-218ENST00000548945 NR2C1P13056 603 aa10.93□□□□□ -0.66
PTCH1-218ENST00000548945 LIPAP38571 399 aa10.93□□□□□ -0.66
PTCH1-218ENST00000548945 RBM34P42696 430 aaKnown RBP10.93□□□□□ -0.66
PTCH1-218ENST00000548945 ZNF81P51508 661 aa10.93□□□□□ -0.66
PTCH1-218ENST00000548945 UGT2B15P54855 530 aa10.93□□□□□ -0.66
PTCH1-218ENST00000548945 HSF2Q03933 536 aa10.93□□□□□ -0.66
PTCH1-218ENST00000548945 SLC3A1Q07837 685 aa10.93□□□□□ -0.66
PTCH1-218ENST00000548945 ZNF718Q3SXZ3 478 aa10.93□□□□□ -0.66
PTCH1-218ENST00000548945 AVPI1Q5T686 147 aa10.93□□□□□ -0.66
PTCH1-218ENST00000548945 DCAF12L2Q5VW00 463 aa10.93□□□□□ -0.66
PTCH1-218ENST00000548945 TSPYL5Q86VY4 417 aaPredicted RBP10.93□□□□□ -0.66
PTCH1-218ENST00000548945 RBM45Q8IUH3 476 aaKnown RBP10.93□□□□□ -0.66
PTCH1-218ENST00000548945 OR4D11Q8NGI4 311 aa10.93□□□□□ -0.66
PTCH1-218ENST00000548945 OR1J1Q8NGS3 322 aa10.93□□□□□ -0.66
PTCH1-218ENST00000548945 SLC26A7Q8TE54 656 aa10.93□□□□□ -0.66
PTCH1-218ENST00000548945 ASB10Q8WXI3 467 aa10.93□□□□□ -0.66
PTCH1-218ENST00000548945 PRSS27Q9BQR3 290 aa10.93□□□□□ -0.66
PTCH1-218ENST00000548945 POLR2J2Q9GZM3 115 aaKnown RBP10.93□□□□□ -0.66
PTCH1-218ENST00000548945 POLR2J3Q9H1A7 115 aaKnown RBP10.93□□□□□ -0.66
PTCH1-218ENST00000548945 OR51B6Q9H340 312 aa10.93□□□□□ -0.66
PTCH1-218ENST00000548945 CYSLTR2Q9NS75 346 aa10.93□□□□□ -0.66
PTCH1-218ENST00000548945 CGGBP1Q9UFW8 167 aaPredicted RBP10.93□□□□□ -0.66
PTCH1-218ENST00000548945 NDUFAF1Q9Y375 327 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms