RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 MEMO1Q9Y316 297 aa2.9□□□□□ -1.95
PTCH1-216ENST00000548379 TIMM10BQ9Y5J6 103 aa2.9□□□□□ -1.95
PTCH1-216ENST00000548379 TRIOO75962 3097 aa2.9□□□□□ -1.95
PTCH1-216ENST00000548379 EP300Q09472 2414 aaPredicted RBP2.9□□□□□ -1.95
PTCH1-216ENST00000548379 RIF1Q5UIP0 2472 aaKnown RBP2.9□□□□□ -1.95
PTCH1-216ENST00000548379 MYH7BA7E2Y1 1941 aa2.89□□□□□ -1.95
PTCH1-216ENST00000548379 ATG2AQ2TAZ0 1938 aa2.89□□□□□ -1.95
PTCH1-216ENST00000548379 FAM186AA6NE01 2351 aa2.89□□□□□ -1.95
PTCH1-216ENST00000548379 VPS37CA5D8V6 355 aaPredicted RBP2.89□□□□□ -1.95
PTCH1-216ENST00000548379 TUBAL3A6NHL2 446 aa2.89□□□□□ -1.95
PTCH1-216ENST00000548379 VSTM2BA6NLU5 285 aa2.89□□□□□ -1.95
PTCH1-216ENST00000548379 PRAMEF26H0Y7S4 382 aa2.89□□□□□ -1.95
PTCH1-216ENST00000548379 K7N7A8 449 aa2.89□□□□□ -1.95
PTCH1-216ENST00000548379 ACACBO00763 2458 aa2.89□□□□□ -1.95
PTCH1-216ENST00000548379 TBL1XO60907 577 aa2.89□□□□□ -1.95
PTCH1-216ENST00000548379 IL1BP01584 269 aa2.89□□□□□ -1.95
PTCH1-216ENST00000548379 OR8U8P0C7N1 319 aa2.89□□□□□ -1.95
PTCH1-216ENST00000548379 CCDC130P13994 396 aa2.89□□□□□ -1.95
PTCH1-216ENST00000548379 KLK2P20151 261 aa2.89□□□□□ -1.95
PTCH1-216ENST00000548379 PCMT1P22061 227 aa2.89□□□□□ -1.95
PTCH1-216ENST00000548379 AQP1P29972 269 aa2.89□□□□□ -1.95
PTCH1-216ENST00000548379 FGF9P31371 208 aaPredicted RBP2.89□□□□□ -1.95
PTCH1-216ENST00000548379 LEPP41159 167 aa2.89□□□□□ -1.95
PTCH1-216ENST00000548379 DAP3P51398 398 aaKnown RBP2.89□□□□□ -1.95
PTCH1-216ENST00000548379 DIO3P55073 304 aa2.89□□□□□ -1.95
PTCH1-216ENST00000548379 YWHAGP61981 247 aaKnown RBP eCLIP2.89□□□□□ -1.95
PTCH1-216ENST00000548379 CYP24A1Q07973 514 aa2.89□□□□□ -1.95
PTCH1-216ENST00000548379 MYO9BQ13459 2157 aa2.89□□□□□ -1.95
PTCH1-216ENST00000548379 CUL2Q13617 745 aa2.89□□□□□ -1.95
PTCH1-216ENST00000548379 CST6Q15828 149 aa2.89□□□□□ -1.95
PTCH1-216ENST00000548379 OTOGLQ3ZCN5 2332 aa2.89□□□□□ -1.95
PTCH1-216ENST00000548379 FILIP1LQ4L180 1135 aa2.89□□□□□ -1.95
PTCH1-216ENST00000548379 KLF17Q5JT82 389 aaPredicted RBP2.89□□□□□ -1.95
PTCH1-216ENST00000548379 CROCCQ5TZA2 2017 aa2.89□□□□□ -1.95
PTCH1-216ENST00000548379 CCDC137Q6PK04 289 aaKnown RBP2.89□□□□□ -1.95
PTCH1-216ENST00000548379 UNQ9370/PRO34162Q6UXP9 181 aa2.89□□□□□ -1.95
PTCH1-216ENST00000548379 Q6ZPB1 254 aaPredicted RBP2.89□□□□□ -1.95
PTCH1-216ENST00000548379 CLEC20AQ6ZU45 233 aa2.89□□□□□ -1.95
PTCH1-216ENST00000548379 CCDC80Q76M96 950 aa2.89□□□□□ -1.95
PTCH1-216ENST00000548379 ZNF584Q8IVC4 421 aa2.89□□□□□ -1.95
PTCH1-216ENST00000548379 MMAAQ8IVH4 418 aaKnown RBP2.89□□□□□ -1.95
PTCH1-216ENST00000548379 NELFCDQ8IXH7 590 aa2.89□□□□□ -1.95
PTCH1-216ENST00000548379 LRRC75A-AS1Q8N1F1 130 aa2.89□□□□□ -1.95
PTCH1-216ENST00000548379 TBX15Q96SF7 602 aa2.89□□□□□ -1.95
PTCH1-216ENST00000548379 PARD6BQ9BYG5 372 aa2.89□□□□□ -1.95
PTCH1-216ENST00000548379 MAGT1Q9H0U3 335 aa2.89□□□□□ -1.95
PTCH1-216ENST00000548379 VCX2Q9H322 139 aa2.89□□□□□ -1.95
PTCH1-216ENST00000548379 CYP3A43Q9HB55 503 aa2.89□□□□□ -1.95
PTCH1-216ENST00000548379 PRSS16Q9NQE7 514 aa2.89□□□□□ -1.95
PTCH1-216ENST00000548379 DYRK4Q9NR20 520 aa2.89□□□□□ -1.95
PTCH1-216ENST00000548379 B4GALT7Q9UBV7 327 aa2.89□□□□□ -1.95
PTCH1-216ENST00000548379 LCMT1Q9UIC8 334 aa2.89□□□□□ -1.95
PTCH1-216ENST00000548379 PTBP2Q9UKA9 531 aaKnown RBP2.89□□□□□ -1.95
PTCH1-216ENST00000548379 PLLPQ9Y342 182 aa2.89□□□□□ -1.95
PTCH1-216ENST00000548379 MYO7AQ13402 2215 aa2.89□□□□□ -1.95
PTCH1-216ENST00000548379 DMXL1Q9Y485 3027 aa2.89□□□□□ -1.95
PTCH1-216ENST00000548379 A0A0G2JRQ6 117 aa2.88□□□□□ -1.95
PTCH1-216ENST00000548379 CTAGE15A4D2H0 777 aa2.88□□□□□ -1.95
PTCH1-216ENST00000548379 LRRIQ3A6PVS8 624 aaPredicted RBP2.88□□□□□ -1.95
PTCH1-216ENST00000548379 TRDCB7Z8K6 153 aa2.88□□□□□ -1.95
PTCH1-216ENST00000548379 TMX2-CTNND1H3BSU7 103 aa2.88□□□□□ -1.95
PTCH1-216ENST00000548379 CALUO43852 315 aaPredicted RBP2.88□□□□□ -1.95
PTCH1-216ENST00000548379 STX10O60499 249 aa2.88□□□□□ -1.95
PTCH1-216ENST00000548379 LY6G6DO95868 133 aa2.88□□□□□ -1.95
PTCH1-216ENST00000548379 IGHV4-34P06331 123 aa2.88□□□□□ -1.95
PTCH1-216ENST00000548379 GP1BAP07359 652 aa2.88□□□□□ -1.95
PTCH1-216ENST00000548379 POU2F1P14859 743 aa2.88□□□□□ -1.95
PTCH1-216ENST00000548379 PSMB1P20618 241 aaKnown RBP2.88□□□□□ -1.95
PTCH1-216ENST00000548379 COX5AP20674 150 aa2.88□□□□□ -1.95
PTCH1-216ENST00000548379 UGT1A5P35504 534 aa2.88□□□□□ -1.95
PTCH1-216ENST00000548379 PSMD8P48556 350 aa2.88□□□□□ -1.95
PTCH1-216ENST00000548379 PLK1P53350 603 aa2.88□□□□□ -1.95
PTCH1-216ENST00000548379 CLDN6P56747 220 aa2.88□□□□□ -1.95
PTCH1-216ENST00000548379 YWHAEP62258 255 aaKnown RBP2.88□□□□□ -1.95
PTCH1-216ENST00000548379 TNFRSF17Q02223 184 aa2.88□□□□□ -1.95
PTCH1-216ENST00000548379 ZNF45Q02386 682 aa2.88□□□□□ -1.95
PTCH1-216ENST00000548379 GBE1Q04446 702 aa2.88□□□□□ -1.95
PTCH1-216ENST00000548379 SLC10A7Q0GE19 358 aa2.88□□□□□ -1.95
PTCH1-216ENST00000548379 KLRB1Q12918 225 aa2.88□□□□□ -1.95
PTCH1-216ENST00000548379 ZMYND11Q15326 602 aa2.88□□□□□ -1.95
PTCH1-216ENST00000548379 HNRNPA1L2Q32P51 320 aaKnown RBP2.88□□□□□ -1.95
PTCH1-216ENST00000548379 FHL5Q5TD97 284 aa2.88□□□□□ -1.95
PTCH1-216ENST00000548379 ZNF544Q6NX49 715 aa2.88□□□□□ -1.95
PTCH1-216ENST00000548379 HSD17B13Q7Z5P4 300 aaPredicted RBP2.88□□□□□ -1.95
PTCH1-216ENST00000548379 CTAGE6Q86UF2 777 aa2.88□□□□□ -1.95
PTCH1-216ENST00000548379 C12orf56Q8IXR9 622 aa2.88□□□□□ -1.95
PTCH1-216ENST00000548379 C14orf178Q8N769 122 aaPredicted RBP2.88□□□□□ -1.95
PTCH1-216ENST00000548379 C12orf29Q8N999 325 aa2.88□□□□□ -1.95
PTCH1-216ENST00000548379 OR10H4Q8NGA5 316 aa2.88□□□□□ -1.95
PTCH1-216ENST00000548379 OR5D13Q8NGL4 314 aa2.88□□□□□ -1.95
PTCH1-216ENST00000548379 EFHD2Q96C19 240 aaPredicted RBP2.88□□□□□ -1.95
PTCH1-216ENST00000548379 DNAJC19Q96DA6 116 aa2.88□□□□□ -1.95
PTCH1-216ENST00000548379 MS4A14Q96JA4 679 aa2.88□□□□□ -1.95
PTCH1-216ENST00000548379 SMIM14Q96QK8 99 aa2.88□□□□□ -1.95
PTCH1-216ENST00000548379 TMEM43Q9BTV4 400 aa2.88□□□□□ -1.95
PTCH1-216ENST00000548379 TRIM62Q9BVG3 475 aa2.88□□□□□ -1.95
PTCH1-216ENST00000548379 CALN1Q9BXU9 219 aa2.88□□□□□ -1.95
PTCH1-216ENST00000548379 YTHDF1Q9BYJ9 559 aaKnown RBP2.88□□□□□ -1.95
PTCH1-216ENST00000548379 NMUR2Q9GZQ4 415 aa2.88□□□□□ -1.95
PTCH1-216ENST00000548379 NEUROG2Q9H2A3 272 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms