RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 ZNF735P0CB33 412 aa12.85□□□□□ -0.35
SRP54-202ENST00000546080 ALOX5APP20292 161 aa12.85□□□□□ -0.35
SRP54-202ENST00000546080 PGDP52209 483 aa12.85□□□□□ -0.35
SRP54-202ENST00000546080 FIGLAQ6QHK4 219 aa12.85□□□□□ -0.35
SRP54-202ENST00000546080 ZNF813Q6ZN06 617 aa12.85□□□□□ -0.35
SRP54-202ENST00000546080 NDUFAF7Q7L592 441 aa12.85□□□□□ -0.35
SRP54-202ENST00000546080 HOXB13Q92826 284 aaPredicted RBP12.85□□□□□ -0.35
SRP54-202ENST00000546080 RERGQ96A58 199 aaPredicted RBP12.85□□□□□ -0.35
SRP54-202ENST00000546080 SLCO5A1Q9H2Y9 848 aa12.85□□□□□ -0.35
SRP54-202ENST00000546080 ZFP57Q9NU63 452 aa12.85□□□□□ -0.35
SRP54-202ENST00000546080 GRHPRQ9UBQ7 328 aa12.85□□□□□ -0.35
SRP54-202ENST00000546080 EPHA6Q9UF33 1036 aa12.85□□□□□ -0.35
SRP54-202ENST00000546080 TBC1D29Q9UFV1 150 aa12.85□□□□□ -0.35
SRP54-202ENST00000546080 MSRAQ9UJ68 235 aa12.85□□□□□ -0.35
SRP54-202ENST00000546080 HIF3AQ9Y2N7 669 aa12.85□□□□□ -0.35
SRP54-202ENST00000546080 CARHSP1Q9Y2V2 147 aaKnown RBP12.85□□□□□ -0.35
SRP54-202ENST00000546080 TMEM14AQ9Y6G1 99 aa12.85□□□□□ -0.35
SRP54-202ENST00000546080 IGKV1D-42A0A075B6H8 117 aa12.84□□□□□ -0.35
SRP54-202ENST00000546080 HSPB2A8KAH6 182 aa12.84□□□□□ -0.35
SRP54-202ENST00000546080 FGF16O43320 207 aa12.84□□□□□ -0.35
SRP54-202ENST00000546080 EML2O95834 649 aa12.84□□□□□ -0.35
SRP54-202ENST00000546080 ACTL6AO96019 429 aa12.84□□□□□ -0.35
SRP54-202ENST00000546080 F13BP05160 661 aa12.84□□□□□ -0.35
SRP54-202ENST00000546080 DCNP07585 359 aaKnown RBP12.84□□□□□ -0.35
SRP54-202ENST00000546080 SPP1P10451 314 aa12.84□□□□□ -0.35
SRP54-202ENST00000546080 APEHP13798 732 aaKnown RBP12.84□□□□□ -0.35
SRP54-202ENST00000546080 ZNF28P17035 718 aa12.84□□□□□ -0.35
SRP54-202ENST00000546080 WASP42768 502 aa12.84□□□□□ -0.35
SRP54-202ENST00000546080 DCDP81605 110 aaKnown RBP12.84□□□□□ -0.35
SRP54-202ENST00000546080 HSPB2Q16082 182 aa12.84□□□□□ -0.35
SRP54-202ENST00000546080 AVPI1Q5T686 147 aa12.84□□□□□ -0.35
SRP54-202ENST00000546080 C3orf33Q6P1S2 294 aa12.84□□□□□ -0.35
SRP54-202ENST00000546080 LRRC69Q6ZNQ3 347 aa12.84□□□□□ -0.35
SRP54-202ENST00000546080 LYG2Q86SG7 212 aa12.84□□□□□ -0.35
SRP54-202ENST00000546080 OR13C8Q8NGS7 320 aa12.84□□□□□ -0.35
SRP54-202ENST00000546080 GLYATL2Q8WU03 294 aa12.84□□□□□ -0.35
SRP54-202ENST00000546080 CNTNAP3BQ96NU0 1288 aa12.84□□□□□ -0.35
SRP54-202ENST00000546080 INTS14Q96SY0 518 aa12.84□□□□□ -0.35
SRP54-202ENST00000546080 GTF2A1LQ9UNN4 478 aa12.84□□□□□ -0.35
SRP54-202ENST00000546080 VSIG4Q9Y279 399 aa12.84□□□□□ -0.35
SRP54-202ENST00000546080 TRBV23OR9-2A0A075B6M9 112 aa12.84□□□□□ -0.35
SRP54-202ENST00000546080 OR6C76A6NM76 312 aa12.84□□□□□ -0.35
SRP54-202ENST00000546080 PHYHO14832 338 aa12.84□□□□□ -0.35
SRP54-202ENST00000546080 GUSBP08236 651 aa12.84□□□□□ -0.35
SRP54-202ENST00000546080 TPT1P13693 172 aaKnown RBP12.84□□□□□ -0.35
SRP54-202ENST00000546080 KIR2DS3Q14952 304 aa12.84□□□□□ -0.35
SRP54-202ENST00000546080 ZNF74Q16587 644 aa12.84□□□□□ -0.35
SRP54-202ENST00000546080 C10orf91Q5T1B1 145 aa12.84□□□□□ -0.35
SRP54-202ENST00000546080 FAM166AQ6J272 317 aa12.84□□□□□ -0.35
SRP54-202ENST00000546080 VITQ6UXI7 678 aa12.84□□□□□ -0.35
SRP54-202ENST00000546080 CA13Q8N1Q1 262 aa12.84□□□□□ -0.35
SRP54-202ENST00000546080 LRRC75AQ8NAA5 344 aa12.84□□□□□ -0.35
SRP54-202ENST00000546080 OR10G6Q8NH81 332 aa12.84□□□□□ -0.35
SRP54-202ENST00000546080 FLVCR1-AS1Q8TAF5 88 aa12.84□□□□□ -0.35
SRP54-202ENST00000546080 C2CD4CQ8TF44 421 aa12.84□□□□□ -0.35
SRP54-202ENST00000546080 ANKRD9Q96BM1 317 aaPredicted RBP12.84□□□□□ -0.35
SRP54-202ENST00000546080 SLC41A2Q96JW4 573 aa12.84□□□□□ -0.35
SRP54-202ENST00000546080 CAPNS2Q96L46 248 aa12.84□□□□□ -0.35
SRP54-202ENST00000546080 SLC6A7Q99884 636 aa12.84□□□□□ -0.35
SRP54-202ENST00000546080 ZFYVE21Q9BQ24 234 aa12.84□□□□□ -0.35
SRP54-202ENST00000546080 CMSS1Q9BQ75 279 aaKnown RBP12.84□□□□□ -0.35
SRP54-202ENST00000546080 TREM1Q9NP99 234 aa12.84□□□□□ -0.35
SRP54-202ENST00000546080 DPP7Q9UHL4 492 aa12.84□□□□□ -0.35
SRP54-202ENST00000546080 SERINC4A6NH21 518 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 TTLL8A6PVC2 850 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 H0YGG7 62 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 LINC01387J3KSC0 135 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 RAD1O60671 282 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 F12P00748 615 aaPredicted RBP12.83□□□□□ -0.36
SRP54-202ENST00000546080 RENP00797 406 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 CD74P04233 296 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 IFNA4P05014 189 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 ZBTB25P24278 435 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 HTR2CP28335 458 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 IGFALSP35858 605 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 ADPRHP54922 357 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 ARF3P61204 181 aaPredicted RBP12.83□□□□□ -0.36
SRP54-202ENST00000546080 NNATQ16517 81 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 NKPD1Q17RQ9 610 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 PRRT3Q5FWE3 981 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 PAPD4Q6PIY7 484 aaKnown RBP12.83□□□□□ -0.36
SRP54-202ENST00000546080 ZNF584Q8IVC4 421 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 MRPL43Q8N983 215 aaKnown RBP12.83□□□□□ -0.36
SRP54-202ENST00000546080 OR5AP2Q8NGF4 316 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 MOGAT1Q96PD6 335 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 OR2M4Q96R27 311 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 PHB2Q99623 299 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 APOOQ9BUR5 198 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 TLNRD1Q9H1K6 362 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 ZMAT3Q9HA38 289 aaKnown RBP12.83□□□□□ -0.36
SRP54-202ENST00000546080 THAP10Q9P2Z0 257 aaPredicted RBP12.83□□□□□ -0.36
SRP54-202ENST00000546080 LTBP2Q14767 1821 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 LOC100509620A0A075B734 347 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 ARPC4-TTLL3A0A0A6YYG9 625 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 NUDT19A8MXV4 375 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 NPIPB9F8W1W9 429 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 TNFSF14O43557 240 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 RDH16O75452 317 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 GPANK1O95872 356 aa12.83□□□□□ -0.36
SRP54-202ENST00000546080 SLC35E2P0CK97 266 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms