RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 LGALS8O00214 317 aa14.25□□□□□ -0.13
LDLR-204ENST00000545707 XKRYO14609 159 aa14.25□□□□□ -0.13
LDLR-204ENST00000545707 CAPZBP47756 277 aa14.25□□□□□ -0.13
LDLR-204ENST00000545707 DLX5P56178 289 aa14.25□□□□□ -0.13
LDLR-204ENST00000545707 FOXL2P58012 376 aa14.25□□□□□ -0.13
LDLR-204ENST00000545707 EGR3Q06889 387 aa14.25□□□□□ -0.13
LDLR-204ENST00000545707 SLC17A1Q14916 467 aa14.25□□□□□ -0.13
LDLR-204ENST00000545707 ACKR1Q16570 336 aa14.25□□□□□ -0.13
LDLR-204ENST00000545707 KIAA0895LQ68EN5 471 aa14.25□□□□□ -0.13
LDLR-204ENST00000545707 OR10K2Q6IF99 312 aa14.25□□□□□ -0.13
LDLR-204ENST00000545707 TMUB2Q71RG4 321 aa14.25□□□□□ -0.13
LDLR-204ENST00000545707 MRPL38Q96DV4 380 aaKnown RBP14.25□□□□□ -0.13
LDLR-204ENST00000545707 ZNF578Q96N58 590 aaPredicted RBP14.25□□□□□ -0.13
LDLR-204ENST00000545707 SLC38A3Q99624 504 aa14.25□□□□□ -0.13
LDLR-204ENST00000545707 REG4Q9BYZ8 158 aa14.25□□□□□ -0.13
LDLR-204ENST00000545707 MRPL22Q9NWU5 206 aaKnown RBP14.25□□□□□ -0.13
LDLR-204ENST00000545707 SDHAF2Q9NX18 166 aa14.25□□□□□ -0.13
LDLR-204ENST00000545707 CGGBP1Q9UFW8 167 aaPredicted RBP14.25□□□□□ -0.13
LDLR-204ENST00000545707 COL4A2P08572 1712 aa14.25□□□□□ -0.13
LDLR-204ENST00000545707 hCG_1807616A0A1W2PRN6 198 aa14.25□□□□□ -0.13
LDLR-204ENST00000545707 BGLAPP02818 100 aa14.25□□□□□ -0.13
LDLR-204ENST00000545707 S100A11P31949 105 aa14.25□□□□□ -0.13
LDLR-204ENST00000545707 MECP2P51608 486 aaKnown RBP14.25□□□□□ -0.13
LDLR-204ENST00000545707 NR0B1P51843 470 aaKnown RBP14.25□□□□□ -0.13
LDLR-204ENST00000545707 INSM1Q01101 510 aaPredicted RBP14.25□□□□□ -0.13
LDLR-204ENST00000545707 RASGEF1BQ0VAM2 473 aa14.25□□□□□ -0.13
LDLR-204ENST00000545707 BIKQ13323 160 aa14.25□□□□□ -0.13
LDLR-204ENST00000545707 C4orf46Q504U0 113 aa14.25□□□□□ -0.13
LDLR-204ENST00000545707 EMC4Q5J8M3 183 aa14.25□□□□□ -0.13
LDLR-204ENST00000545707 NDUFAF7Q7L592 441 aa14.25□□□□□ -0.13
LDLR-204ENST00000545707 ADGRG3Q86Y34 549 aa14.25□□□□□ -0.13
LDLR-204ENST00000545707 OR2AK2Q8NG84 335 aa14.25□□□□□ -0.13
LDLR-204ENST00000545707 TNFAIP8L1Q8WVP5 186 aa14.25□□□□□ -0.13
LDLR-204ENST00000545707 PNPLA2Q96AD5 504 aa14.25□□□□□ -0.13
LDLR-204ENST00000545707 KLHDC7BQ96G42 594 aa14.25□□□□□ -0.13
LDLR-204ENST00000545707 OR11A1Q9GZK7 315 aa14.25□□□□□ -0.13
LDLR-204ENST00000545707 MMP17Q9ULZ9 603 aa14.25□□□□□ -0.13
LDLR-204ENST00000545707 KCNMB2Q9Y691 235 aa14.25□□□□□ -0.13
LDLR-204ENST00000545707 TMEM14AQ9Y6G1 99 aa14.25□□□□□ -0.13
LDLR-204ENST00000545707 PCNX3Q9H6A9 2034 aa14.24□□□□□ -0.13
LDLR-204ENST00000545707 M0QYG6 137 aa14.24□□□□□ -0.13
LDLR-204ENST00000545707 OR6A2O95222 327 aa14.24□□□□□ -0.13
LDLR-204ENST00000545707 NMBP08949 121 aa14.24□□□□□ -0.13
LDLR-204ENST00000545707 CTLA4P16410 223 aa14.24□□□□□ -0.13
LDLR-204ENST00000545707 PRSS3P35030 304 aa14.24□□□□□ -0.13
LDLR-204ENST00000545707 FAUP35544 74 aaKnown RBP14.24□□□□□ -0.13
LDLR-204ENST00000545707 RAB11BQ15907 218 aa14.24□□□□□ -0.13
LDLR-204ENST00000545707 C11orf88Q6PI97 169 aa14.24□□□□□ -0.13
LDLR-204ENST00000545707 ZNF627Q7L945 461 aa14.24□□□□□ -0.13
LDLR-204ENST00000545707 GPAT4Q86UL3 456 aa14.24□□□□□ -0.13
LDLR-204ENST00000545707 OR1J4Q8NGS1 313 aa14.24□□□□□ -0.13
LDLR-204ENST00000545707 DUSP19Q8WTR2 217 aa14.24□□□□□ -0.13
LDLR-204ENST00000545707 OR8B4Q96RC9 309 aa14.24□□□□□ -0.13
LDLR-204ENST00000545707 NUDT9Q9BW91 350 aa14.24□□□□□ -0.13
LDLR-204ENST00000545707 EXO5Q9H790 373 aa14.24□□□□□ -0.13
LDLR-204ENST00000545707 EXOSC3Q9NQT5 275 aaKnown RBP14.24□□□□□ -0.13
LDLR-204ENST00000545707 PLCL2Q9UPR0 1127 aa14.24□□□□□ -0.13
LDLR-204ENST00000545707 PCDH15Q96QU1 1955 aa14.24□□□□□ -0.13
LDLR-204ENST00000545707 DCDC2BA2VCK2 349 aa14.24□□□□□ -0.13
LDLR-204ENST00000545707 LPLP06858 475 aa14.24□□□□□ -0.13
LDLR-204ENST00000545707 CSF1P09603 554 aa14.24□□□□□ -0.13
LDLR-204ENST00000545707 PRKACBP22694 351 aa14.24□□□□□ -0.13
LDLR-204ENST00000545707 RORAP35398 523 aa14.24□□□□□ -0.13
LDLR-204ENST00000545707 SERTAD2Q14140 314 aa14.24□□□□□ -0.13
LDLR-204ENST00000545707 B3GNTL1Q67FW5 361 aaPredicted RBP14.24□□□□□ -0.13
LDLR-204ENST00000545707 OR51A2Q8NGJ7 313 aa14.24□□□□□ -0.13
LDLR-204ENST00000545707 LMX1AQ8TE12 382 aa14.24□□□□□ -0.13
LDLR-204ENST00000545707 C15orf40Q8WUR7 153 aa14.24□□□□□ -0.13
LDLR-204ENST00000545707 ADIPOR1Q96A54 375 aa14.24□□□□□ -0.13
LDLR-204ENST00000545707 CCNL2Q96S94 520 aaPredicted RBP14.24□□□□□ -0.13
LDLR-204ENST00000545707 TCRBV16S1A1N1A0A5B0 115 aa14.23□□□□□ -0.13
LDLR-204ENST00000545707 F5H5P2 479 aa14.23□□□□□ -0.13
LDLR-204ENST00000545707 ZNF432O94892 652 aa14.23□□□□□ -0.13
LDLR-204ENST00000545707 AKAIN1P0CW23 69 aa14.23□□□□□ -0.13
LDLR-204ENST00000545707 ADAM8P78325 824 aa14.23□□□□□ -0.13
LDLR-204ENST00000545707 SORDQ00796 357 aa14.23□□□□□ -0.13
LDLR-204ENST00000545707 TUSC1Q2TAM9 212 aa14.23□□□□□ -0.13
LDLR-204ENST00000545707 VWA2Q5GFL6 755 aa14.23□□□□□ -0.13
LDLR-204ENST00000545707 GLYATL3Q5SZD4 288 aa14.23□□□□□ -0.13
LDLR-204ENST00000545707 STEAP1BQ6NZ63 245 aa14.23□□□□□ -0.13
LDLR-204ENST00000545707 TMED4Q7Z7H5 227 aa14.23□□□□□ -0.13
LDLR-204ENST00000545707 SPERTQ8NA61 448 aa14.23□□□□□ -0.13
LDLR-204ENST00000545707 OR6N1Q8NGY5 312 aa14.23□□□□□ -0.13
LDLR-204ENST00000545707 SLC46A1Q96NT5 459 aa14.23□□□□□ -0.13
LDLR-204ENST00000545707 TPSD1Q9BZJ3 242 aa14.23□□□□□ -0.13
LDLR-204ENST00000545707 MS4A7Q9GZW8 240 aaPredicted RBP14.23□□□□□ -0.13
LDLR-204ENST00000545707 TAS2R4Q9NYW5 299 aa14.23□□□□□ -0.13
LDLR-204ENST00000545707 ZNF230Q9UIE0 474 aaPredicted RBP14.23□□□□□ -0.13
LDLR-204ENST00000545707 RP1P56715 2156 aa14.23□□□□□ -0.13
LDLR-204ENST00000545707 PRSS37A4D1T9 235 aa14.23□□□□□ -0.13
LDLR-204ENST00000545707 LMX1BO60663 402 aa14.23□□□□□ -0.13
LDLR-204ENST00000545707 TMEM127O75204 238 aa14.23□□□□□ -0.13
LDLR-204ENST00000545707 DDAH2O95865 285 aa14.23□□□□□ -0.13
LDLR-204ENST00000545707 IGF2P01344 180 aa14.23□□□□□ -0.13
LDLR-204ENST00000545707 HLA-DOBP13765 273 aa14.23□□□□□ -0.13
LDLR-204ENST00000545707 IL12BP29460 328 aa14.23□□□□□ -0.13
LDLR-204ENST00000545707 CSF2RBP32927 897 aa14.23□□□□□ -0.13
LDLR-204ENST00000545707 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.23□□□□□ -0.13
LDLR-204ENST00000545707 RGS7BPQ6MZT1 257 aaPredicted RBP14.23□□□□□ -0.13
LDLR-204ENST00000545707 KRT77Q7Z794 578 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms