RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 HOXA3O43365 443 aaPredicted RBP12.36□□□□□ -0.43
RTN3-214ENST00000545432 CLPXO76031 633 aa12.36□□□□□ -0.43
RTN3-214ENST00000545432 QDPRP09417 244 aa12.36□□□□□ -0.43
RTN3-214ENST00000545432 WNT2P09544 360 aa12.36□□□□□ -0.43
RTN3-214ENST00000545432 SELEP16581 610 aa12.36□□□□□ -0.43
RTN3-214ENST00000545432 HOXB9P17482 250 aaPredicted RBP12.36□□□□□ -0.43
RTN3-214ENST00000545432 AHCYP23526 432 aa12.36□□□□□ -0.43
RTN3-214ENST00000545432 RAG2P55895 527 aa12.36□□□□□ -0.43
RTN3-214ENST00000545432 GLO1Q04760 184 aa12.36□□□□□ -0.43
RTN3-214ENST00000545432 OR1Q1Q15612 314 aa12.36□□□□□ -0.43
RTN3-214ENST00000545432 GTDC1Q4AE62 458 aa12.36□□□□□ -0.43
RTN3-214ENST00000545432 THEM4Q5T1C6 240 aa12.36□□□□□ -0.43
RTN3-214ENST00000545432 ZNF774Q6NX45 483 aa12.36□□□□□ -0.43
RTN3-214ENST00000545432 LRRN1Q6UXK5 716 aa12.36□□□□□ -0.43
RTN3-214ENST00000545432 KLHL36Q8N4N3 616 aa12.36□□□□□ -0.43
RTN3-214ENST00000545432 TMEM86BQ8N661 226 aa12.36□□□□□ -0.43
RTN3-214ENST00000545432 RBM15BQ8NDT2 890 aaKnown RBP12.36□□□□□ -0.43
RTN3-214ENST00000545432 ANP32BQ92688 251 aaKnown RBP12.36□□□□□ -0.43
RTN3-214ENST00000545432 CCT8L2Q96SF2 557 aa12.36□□□□□ -0.43
RTN3-214ENST00000545432 EVA1AQ9H8M9 152 aa12.36□□□□□ -0.43
RTN3-214ENST00000545432 CACYBPQ9HB71 228 aaKnown RBP12.36□□□□□ -0.43
RTN3-214ENST00000545432 NBEAL2Q6ZNJ1 2754 aa12.36□□□□□ -0.43
RTN3-214ENST00000545432 LOC100509620A0A075B734 347 aa12.35□□□□□ -0.43
RTN3-214ENST00000545432 PLSCR5A0PG75 271 aa12.35□□□□□ -0.43
RTN3-214ENST00000545432 CENPBD1B2RD01 187 aa12.35□□□□□ -0.43
RTN3-214ENST00000545432 TPST1O60507 370 aa12.35□□□□□ -0.43
RTN3-214ENST00000545432 ADORA3P0DMS8 318 aa12.35□□□□□ -0.43
RTN3-214ENST00000545432 PCGF2P35227 344 aa12.35□□□□□ -0.43
RTN3-214ENST00000545432 APLNRP35414 380 aa12.35□□□□□ -0.43
RTN3-214ENST00000545432 BPIFB3P59826 476 aa12.35□□□□□ -0.43
RTN3-214ENST00000545432 RPL15P61313 204 aaKnown RBP12.35□□□□□ -0.43
RTN3-214ENST00000545432 FADDQ13158 208 aa12.35□□□□□ -0.43
RTN3-214ENST00000545432 ZMYND11Q15326 602 aa12.35□□□□□ -0.43
RTN3-214ENST00000545432 POU5F2Q8N7G0 328 aa12.35□□□□□ -0.43
RTN3-214ENST00000545432 SLC25A40Q8TBP6 338 aa12.35□□□□□ -0.43
RTN3-214ENST00000545432 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.35□□□□□ -0.43
RTN3-214ENST00000545432 MAL2Q969L2 176 aa12.35□□□□□ -0.43
RTN3-214ENST00000545432 MCHR2Q969V1 340 aa12.35□□□□□ -0.43
RTN3-214ENST00000545432 WFDC6Q9BQY6 131 aa12.35□□□□□ -0.43
RTN3-214ENST00000545432 SIAEQ9HAT2 523 aa12.35□□□□□ -0.43
RTN3-214ENST00000545432 TMEM27Q9HBJ8 222 aa12.35□□□□□ -0.43
RTN3-214ENST00000545432 NOX4Q9NPH5 578 aa12.35□□□□□ -0.43
RTN3-214ENST00000545432 LRCH1Q9Y2L9 728 aa12.35□□□□□ -0.43
RTN3-214ENST00000545432 GMEB1Q9Y692 573 aa12.35□□□□□ -0.43
RTN3-214ENST00000545432 RYR3Q15413 4870 aa12.35□□□□□ -0.43
RTN3-214ENST00000545432 KIR2DS1A0A191URI9 304 aa12.34□□□□□ -0.43
RTN3-214ENST00000545432 FSTL3O95633 263 aa12.34□□□□□ -0.43
RTN3-214ENST00000545432 GPANK1O95872 356 aa12.34□□□□□ -0.43
RTN3-214ENST00000545432 STOMP27105 288 aa12.34□□□□□ -0.43
RTN3-214ENST00000545432 SLC1A6P48664 564 aa12.34□□□□□ -0.43
RTN3-214ENST00000545432 CDH12P55289 794 aa12.34□□□□□ -0.43
RTN3-214ENST00000545432 HLXQ14774 488 aaPredicted RBP12.34□□□□□ -0.43
RTN3-214ENST00000545432 ZNF74Q16587 644 aa12.34□□□□□ -0.43
RTN3-214ENST00000545432 DEFB112Q30KQ8 113 aa12.34□□□□□ -0.43
RTN3-214ENST00000545432 ZMAT1Q5H9K5 638 aa12.34□□□□□ -0.43
RTN3-214ENST00000545432 PABPC1L2AQ5JQF8 200 aa12.34□□□□□ -0.43
RTN3-214ENST00000545432 C10orf128Q5T292 105 aa12.34□□□□□ -0.43
RTN3-214ENST00000545432 UNQ6126/PRO20091Q6UXV3 157 aa12.34□□□□□ -0.43
RTN3-214ENST00000545432 Q6YL49 198 aa12.34□□□□□ -0.43
RTN3-214ENST00000545432 ZNF771Q7L3S4 317 aaPredicted RBP12.34□□□□□ -0.43
RTN3-214ENST00000545432 GEMIN6Q8WXD5 167 aaKnown RBP12.34□□□□□ -0.43
RTN3-214ENST00000545432 ZBTB18Q99592 522 aa12.34□□□□□ -0.43
RTN3-214ENST00000545432 ROPN1BQ9BZX4 212 aaPredicted RBP12.34□□□□□ -0.43
RTN3-214ENST00000545432 OR2J1Q9GZK6 312 aa12.34□□□□□ -0.43
RTN3-214ENST00000545432 ROPN1Q9HAT0 212 aaPredicted RBP12.34□□□□□ -0.43
RTN3-214ENST00000545432 MDFIC2A0A1B0GVS7 189 aa12.33□□□□□ -0.44
RTN3-214ENST00000545432 SLC22A31A6NKX4 558 aa12.33□□□□□ -0.44
RTN3-214ENST00000545432 C11orf98E9PRG8 122 aa12.33□□□□□ -0.44
RTN3-214ENST00000545432 SLC22A3O75751 556 aa12.33□□□□□ -0.44
RTN3-214ENST00000545432 PROK1P58294 105 aa12.33□□□□□ -0.44
RTN3-214ENST00000545432 BTG1P62324 171 aa12.33□□□□□ -0.44
RTN3-214ENST00000545432 MRPS34P82930 218 aaKnown RBP12.33□□□□□ -0.44
RTN3-214ENST00000545432 TNFAIP6P98066 277 aaPredicted RBP12.33□□□□□ -0.44
RTN3-214ENST00000545432 HNRNPA0Q13151 305 aaKnown RBP12.33□□□□□ -0.44
RTN3-214ENST00000545432 TAF9Q16594 264 aa12.33□□□□□ -0.44
RTN3-214ENST00000545432 ESCO2Q56NI9 601 aa12.33□□□□□ -0.44
RTN3-214ENST00000545432 MTX3Q5HYI7 312 aa12.33□□□□□ -0.44
RTN3-214ENST00000545432 KPRPQ5T749 579 aaPredicted RBP12.33□□□□□ -0.44
RTN3-214ENST00000545432 BRICD5Q6PL45 260 aa12.33□□□□□ -0.44
RTN3-214ENST00000545432 JAZF1Q86VZ6 243 aa12.33□□□□□ -0.44
RTN3-214ENST00000545432 ICA1LQ8NDH6 482 aa12.33□□□□□ -0.44
RTN3-214ENST00000545432 C10orf82Q8WW14 230 aa12.33□□□□□ -0.44
RTN3-214ENST00000545432 RAB40AQ8WXH6 277 aa12.33□□□□□ -0.44
RTN3-214ENST00000545432 GTF2H4Q92759 462 aa12.33□□□□□ -0.44
RTN3-214ENST00000545432 NABP1Q96AH0 204 aa12.33□□□□□ -0.44
RTN3-214ENST00000545432 NMD3Q96D46 503 aaKnown RBP12.33□□□□□ -0.44
RTN3-214ENST00000545432 ITCHQ96J02 903 aa12.33□□□□□ -0.44
RTN3-214ENST00000545432 PKNOX2Q96KN3 472 aa12.33□□□□□ -0.44
RTN3-214ENST00000545432 DCLRE1CQ96SD1 692 aaKnown RBP12.33□□□□□ -0.44
RTN3-214ENST00000545432 ARHGDIGQ99819 225 aa12.33□□□□□ -0.44
RTN3-214ENST00000545432 SLC19A3Q9BZV2 496 aa12.33□□□□□ -0.44
RTN3-214ENST00000545432 PAIP1Q9H074 479 aaKnown RBP12.33□□□□□ -0.44
RTN3-214ENST00000545432 SLCO1B3Q9NPD5 702 aa12.33□□□□□ -0.44
RTN3-214ENST00000545432 PNPOQ9NVS9 261 aa12.33□□□□□ -0.44
RTN3-214ENST00000545432 SELENONQ9NZV5 590 aa12.33□□□□□ -0.44
RTN3-214ENST00000545432 EIF3KQ9UBQ5 218 aaKnown RBP12.33□□□□□ -0.44
RTN3-214ENST00000545432 OR5V1Q9UGF6 321 aa12.33□□□□□ -0.44
RTN3-214ENST00000545432 IGHV2-70DA0A0C4DH43 119 aa12.32□□□□□ -0.44
RTN3-214ENST00000545432 CLIC1O00299 241 aa12.32□□□□□ -0.44
RTN3-214ENST00000545432 FMO6PO60774 539 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms