RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 NKX6-2Q9C056 277 aaPredicted RBP5.28□□□□□ -1.56
VPS50-220ENST00000544910 S1PR5Q9H228 398 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 CYSLTR2Q9NS75 346 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 SLC22A11Q9NSA0 550 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 FBXO34Q9NWN3 711 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 LUZP4Q9P127 313 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 SUSD2Q9UGT4 822 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 RNF215Q9Y6U7 377 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 ANKRD12Q6UB98 2062 aa5.28□□□□□ -1.56
VPS50-220ENST00000544910 SCN5AQ14524 2016 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 RPS10-NUDT3A0A1W2PQS6 291 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 PRAMEF25A6NGN4 478 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 GJE1A6NN92 205 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 BCAT2O15382 392 aaPredicted RBP5.27□□□□□ -1.57
VPS50-220ENST00000544910 IGHG1P01857 330 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 SNRNP70P08621 437 aaKnown RBP5.27□□□□□ -1.57
VPS50-220ENST00000544910 EPXP11678 715 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 KIR2DL1P43626 348 aaPredicted RBP5.27□□□□□ -1.57
VPS50-220ENST00000544910 RPS10P46783 165 aaKnown RBP5.27□□□□□ -1.57
VPS50-220ENST00000544910 LSSP48449 732 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 GALK2Q01415 458 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 SQSTM1Q13501 440 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 DOC2BQ14184 412 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 ZNF141Q15928 474 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 SGCBQ16585 318 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 MEP1BQ16820 701 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 C1QTNF12Q5T7M4 302 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 SLC22A25Q6T423 547 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 GRINAQ7Z429 371 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 TMEM200AQ86VY9 491 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 OR5H2Q8NGV7 314 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 DUSP19Q8WTR2 217 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 RNF141Q8WVD5 230 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 ANKRD9Q96BM1 317 aaPredicted RBP5.27□□□□□ -1.57
VPS50-220ENST00000544910 SDHAF2Q9NX18 166 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 HIF3AQ9Y2N7 669 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 TANC1Q9C0D5 1861 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 CIB4A0PJX0 185 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 C2CD4DB7Z1M9 353 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 TOR1AO14656 332 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 TRAPPC6AO75865 159 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 CBX7O95931 251 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 BDKRB2P30411 391 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 EPHA4P54764 986 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 ZNF85Q03923 595 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 HTR4Q13639 388 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 IL10RAQ13651 578 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 BATFQ16520 125 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 OR5M10Q6IEU7 315 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 HIST2H3AQ71DI3 136 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 ADGRE4PQ86SQ3 457 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 TRAPPC6BQ86SZ2 158 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 OR51T1Q8NGJ9 327 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 OR52I2Q8NH67 350 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 MARC2Q969Z3 335 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 LRRC46Q96FV0 321 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 DCBLD2Q96PD2 775 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 MICU1Q9BPX6 476 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 SYT3Q9BQG1 590 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 CRB3Q9BUF7 120 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 HRASLSQ9HDD0 168 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 TUBG2Q9NRH3 451 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 ZNF701Q9NV72 531 aaPredicted RBP5.27□□□□□ -1.57
VPS50-220ENST00000544910 WBP1LQ9NX94 342 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 NDRG3Q9UGV2 375 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 LILRA5A6NI73 299 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 IFITM5A6NNB3 132 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 C4orf51C9J302 202 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 EML2O95834 649 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 RAF1P04049 648 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 AFF3P51826 1226 aaKnown RBP5.27□□□□□ -1.57
VPS50-220ENST00000544910 CRYBA2P53672 197 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 P2RX3P56373 397 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 ZNF74Q16587 644 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 GLYR1Q49A26 553 aaPredicted RBP5.27□□□□□ -1.57
VPS50-220ENST00000544910 C3orf33Q6P1S2 294 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 STAC2Q6ZMT1 411 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 FAM160A2Q8N612 972 aaPredicted RBP5.27□□□□□ -1.57
VPS50-220ENST00000544910 TAAR8Q969N4 342 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 FAM3DQ96BQ1 224 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 JAM3Q9BX67 310 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 KIF25Q9UIL4 384 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 PCOLCE2Q9UKZ9 415 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 TBXA2RP21731 343 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 TAS2R20P59543 309 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 C17orf67Q0P5P2 114 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 FZD2Q14332 565 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 ZNF79Q15937 498 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 LIPNQ5VXI9 398 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 LYSMD4Q5XG99 296 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 ALKAL2Q6UX46 152 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 TMEM92Q6UXU6 159 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 TSEN54Q7Z6J9 526 aaKnown RBP5.27□□□□□ -1.57
VPS50-220ENST00000544910 C12orf57Q99622 126 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 WFDC6Q9BQY6 131 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 CNTNAP3Q9BZ76 1288 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 AUNIPQ9H7T9 357 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 WASF3Q9UPY6 502 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 MICAL3Q7RTP6 2002 aa5.27□□□□□ -1.57
VPS50-220ENST00000544910 PRAMEF27A3QJZ7 478 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms