RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 ESX1Q8N693 406 aa12.41□□□□□ -0.42
VPS33A-208ENST00000543633 OR4D10Q8NGI6 311 aa12.41□□□□□ -0.42
VPS33A-208ENST00000543633 PHYHIPLQ96FC7 376 aa12.41□□□□□ -0.42
VPS33A-208ENST00000543633 EDEM2Q9BV94 578 aa12.41□□□□□ -0.42
VPS33A-208ENST00000543633 C1QTNF6Q9BXI9 259 aa12.41□□□□□ -0.42
VPS33A-208ENST00000543633 ADAM19Q9H013 955 aa12.41□□□□□ -0.42
VPS33A-208ENST00000543633 STARD5Q9NSY2 213 aa12.41□□□□□ -0.42
VPS33A-208ENST00000543633 RASL12Q9NYN1 266 aa12.41□□□□□ -0.42
VPS33A-208ENST00000543633 TP53BP1Q12888 1972 aaPredicted RBP12.41□□□□□ -0.42
VPS33A-208ENST00000543633 A0A0A6YYC8 382 aaPredicted RBP12.4□□□□□ -0.42
VPS33A-208ENST00000543633 MEGF11A6BM72 1044 aa12.4□□□□□ -0.42
VPS33A-208ENST00000543633 TVP23AA6NH52 213 aa12.4□□□□□ -0.42
VPS33A-208ENST00000543633 TMEM200CA6NKL6 621 aa12.4□□□□□ -0.42
VPS33A-208ENST00000543633 C4orf47A7E2U8 309 aa12.4□□□□□ -0.42
VPS33A-208ENST00000543633 H0YC42 278 aa12.4□□□□□ -0.42
VPS33A-208ENST00000543633 I3L1I5 382 aaPredicted RBP12.4□□□□□ -0.42
VPS33A-208ENST00000543633 ZNF264O43296 627 aa12.4□□□□□ -0.42
VPS33A-208ENST00000543633 OR2F2O95006 317 aa12.4□□□□□ -0.42
VPS33A-208ENST00000543633 CD74P04233 296 aa12.4□□□□□ -0.42
VPS33A-208ENST00000543633 ITGA5P08648 1049 aa12.4□□□□□ -0.42
VPS33A-208ENST00000543633 OR4E1P0C645 316 aa12.4□□□□□ -0.42
VPS33A-208ENST00000543633 HPGDP15428 266 aa12.4□□□□□ -0.42
VPS33A-208ENST00000543633 PGDP52209 483 aa12.4□□□□□ -0.42
VPS33A-208ENST00000543633 OR2F1Q13607 317 aa12.4□□□□□ -0.42
VPS33A-208ENST00000543633 C2orf76Q3KRA6 126 aa12.4□□□□□ -0.42
VPS33A-208ENST00000543633 MCATQ8IVS2 390 aaKnown RBP12.4□□□□□ -0.42
VPS33A-208ENST00000543633 KCNRGQ8N5I3 272 aa12.4□□□□□ -0.42
VPS33A-208ENST00000543633 PXT1Q8NFP0 134 aa12.4□□□□□ -0.42
VPS33A-208ENST00000543633 OR52H1Q8NGJ2 320 aa12.4□□□□□ -0.42
VPS33A-208ENST00000543633 OR5M8Q8NGP6 311 aa12.4□□□□□ -0.42
VPS33A-208ENST00000543633 SLC37A2Q8TED4 501 aa12.4□□□□□ -0.42
VPS33A-208ENST00000543633 PTX4Q96A99 478 aa12.4□□□□□ -0.42
VPS33A-208ENST00000543633 LAT2Q9GZY6 243 aa12.4□□□□□ -0.42
VPS33A-208ENST00000543633 FAM60AQ9NP50 221 aa12.4□□□□□ -0.42
VPS33A-208ENST00000543633 CKLFQ9UBR5 152 aa12.4□□□□□ -0.42
VPS33A-208ENST00000543633 ZNF346Q9UL40 294 aaKnown RBP12.4□□□□□ -0.42
VPS33A-208ENST00000543633 TMEM131Q92545 1883 aa12.4□□□□□ -0.42
VPS33A-208ENST00000543633 ARHGEF17Q96PE2 2063 aaPredicted RBP12.4□□□□□ -0.42
VPS33A-208ENST00000543633 MPDZO75970 2070 aa12.4□□□□□ -0.42
VPS33A-208ENST00000543633 TRAV14DV4A0A0A6YYC5 116 aa12.4□□□□□ -0.42
VPS33A-208ENST00000543633 NUDT21O43809 227 aaKnown RBP12.4□□□□□ -0.42
VPS33A-208ENST00000543633 KLF8O95600 359 aaPredicted RBP12.4□□□□□ -0.42
VPS33A-208ENST00000543633 RAB3DO95716 219 aa12.4□□□□□ -0.42
VPS33A-208ENST00000543633 BGLAPP02818 100 aa12.4□□□□□ -0.42
VPS33A-208ENST00000543633 F13BP05160 661 aa12.4□□□□□ -0.42
VPS33A-208ENST00000543633 CD2P06729 351 aa12.4□□□□□ -0.42
VPS33A-208ENST00000543633 ST6GAL1P15907 406 aa12.4□□□□□ -0.42
VPS33A-208ENST00000543633 MPZP25189 248 aa12.4□□□□□ -0.42
VPS33A-208ENST00000543633 RABIFP47224 123 aa12.4□□□□□ -0.42
VPS33A-208ENST00000543633 SORDQ00796 357 aa12.4□□□□□ -0.42
VPS33A-208ENST00000543633 GUCA2AQ02747 115 aa12.4□□□□□ -0.42
VPS33A-208ENST00000543633 CD226Q15762 336 aa12.4□□□□□ -0.42
VPS33A-208ENST00000543633 CHRDL2Q6WN34 429 aa12.4□□□□□ -0.42
VPS33A-208ENST00000543633 ZSCAN1Q8NBB4 408 aa12.4□□□□□ -0.42
VPS33A-208ENST00000543633 OR51A4Q8NGJ6 313 aa12.4□□□□□ -0.42
VPS33A-208ENST00000543633 PHOSPHO1Q8TCT1 267 aa12.4□□□□□ -0.42
VPS33A-208ENST00000543633 ST8SIA2Q92186 375 aa12.4□□□□□ -0.42
VPS33A-208ENST00000543633 SLC25A28Q96A46 364 aa12.4□□□□□ -0.42
VPS33A-208ENST00000543633 MRPS24Q96EL2 167 aaKnown RBP12.4□□□□□ -0.42
VPS33A-208ENST00000543633 ZNF587Q96SQ5 575 aaPredicted RBP12.4□□□□□ -0.42
VPS33A-208ENST00000543633 POFUT1Q9H488 388 aa12.4□□□□□ -0.42
VPS33A-208ENST00000543633 SLC2A8Q9NY64 477 aa12.4□□□□□ -0.42
VPS33A-208ENST00000543633 MRTO4Q9UKD2 239 aaKnown RBP12.4□□□□□ -0.42
VPS33A-208ENST00000543633 COL5A1P20908 1838 aaPredicted RBP12.4□□□□□ -0.43
VPS33A-208ENST00000543633 SPTBN5Q9NRC6 3674 aaKnown RBP12.39□□□□□ -0.43
VPS33A-208ENST00000543633 A0A1B0GTH9 108 aa12.39□□□□□ -0.43
VPS33A-208ENST00000543633 HCRTR1O43613 425 aa12.39□□□□□ -0.43
VPS33A-208ENST00000543633 EIF4E2O60573 245 aaKnown RBP12.39□□□□□ -0.43
VPS33A-208ENST00000543633 KDM4BO94953 1096 aa12.39□□□□□ -0.43
VPS33A-208ENST00000543633 MT-ATP6P00846 226 aa12.39□□□□□ -0.43
VPS33A-208ENST00000543633 HLA-GP17693 338 aa12.39□□□□□ -0.43
VPS33A-208ENST00000543633 IGFBP3P17936 291 aaPredicted RBP12.39□□□□□ -0.43
VPS33A-208ENST00000543633 MST1P26927 711 aa12.39□□□□□ -0.43
VPS33A-208ENST00000543633 PPICP45877 212 aa12.39□□□□□ -0.43
VPS33A-208ENST00000543633 NNATQ16517 81 aa12.39□□□□□ -0.43
VPS33A-208ENST00000543633 LY6G6FQ5SQ64 297 aa12.39□□□□□ -0.43
VPS33A-208ENST00000543633 PHF19Q5T6S3 580 aa12.39□□□□□ -0.43
VPS33A-208ENST00000543633 SLC18B1Q6NT16 456 aa12.39□□□□□ -0.43
VPS33A-208ENST00000543633 KCTD18Q6PI47 426 aaPredicted RBP12.39□□□□□ -0.43
VPS33A-208ENST00000543633 MED25Q71SY5 747 aa12.39□□□□□ -0.43
VPS33A-208ENST00000543633 BIVMQ86UB2 503 aa12.39□□□□□ -0.43
VPS33A-208ENST00000543633 TMEM17Q86X19 198 aa12.39□□□□□ -0.43
VPS33A-208ENST00000543633 PATE1Q8WXA2 126 aa12.39□□□□□ -0.43
VPS33A-208ENST00000543633 SEH1LQ96EE3 360 aa12.39□□□□□ -0.43
VPS33A-208ENST00000543633 SLC41A2Q96JW4 573 aa12.39□□□□□ -0.43
VPS33A-208ENST00000543633 GPN3Q9UHW5 284 aaPredicted RBP12.39□□□□□ -0.43
VPS33A-208ENST00000543633 PRUNE2Q8WUY3 3088 aa12.39□□□□□ -0.43
VPS33A-208ENST00000543633 TRAV36DV7A0A075B6V5 113 aa12.38□□□□□ -0.43
VPS33A-208ENST00000543633 POM121CA8CG34 1229 aa12.38□□□□□ -0.43
VPS33A-208ENST00000543633 MPTX1A8MV57 137 aa12.38□□□□□ -0.43
VPS33A-208ENST00000543633 ATP6V1G2-DDX39BF2Z307 99 aa12.38□□□□□ -0.43
VPS33A-208ENST00000543633 XKRYO14609 159 aa12.38□□□□□ -0.43
VPS33A-208ENST00000543633 OIP5O43482 229 aa12.38□□□□□ -0.43
VPS33A-208ENST00000543633 IGHMP01871 453 aa12.38□□□□□ -0.43
VPS33A-208ENST00000543633 CCKBRP32239 447 aa12.38□□□□□ -0.43
VPS33A-208ENST00000543633 LTBRP36941 435 aa12.38□□□□□ -0.43
VPS33A-208ENST00000543633 MEF2DQ14814 521 aa12.38□□□□□ -0.43
VPS33A-208ENST00000543633 COL19A1Q14993 1142 aa12.38□□□□□ -0.43
VPS33A-208ENST00000543633 TMEM225Q6GV28 225 aa12.38□□□□□ -0.43
VPS33A-208ENST00000543633 ADGRE4PQ86SQ3 457 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms