RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, human

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN6-219	ENST00000542848	THY1	P04216	161 aa		10.13	□□□□□ -0.79
PTPN6-219	ENST00000542848	QDPR	P09417	244 aa		10.13	□□□□□ -0.79
PTPN6-219	ENST00000542848	ASAH2B	P0C7U1	165 aa		10.13	□□□□□ -0.79
PTPN6-219	ENST00000542848	FAM157B	P0CG42	384 aa		10.13	□□□□□ -0.79
PTPN6-219	ENST00000542848	PGA4	P0DJD7	388 aa		10.13	□□□□□ -0.79
PTPN6-219	ENST00000542848	PGA3	P0DJD8	388 aa		10.13	□□□□□ -0.79
PTPN6-219	ENST00000542848	CFP	P27918	469 aa		10.13	□□□□□ -0.79
PTPN6-219	ENST00000542848	CRYBB2	P43320	205 aa		10.13	□□□□□ -0.79
PTPN6-219	ENST00000542848	MAGEB1	P43366	347 aa		10.13	□□□□□ -0.79
PTPN6-219	ENST00000542848	UCP2	P55851	309 aa		10.13	□□□□□ -0.79
PTPN6-219	ENST00000542848	TEK	Q02763	1124 aa		10.13	□□□□□ -0.79
PTPN6-219	ENST00000542848	NFYC	Q13952	458 aa		10.13	□□□□□ -0.79
PTPN6-219	ENST00000542848	NPTX1	Q15818	432 aa		10.13	□□□□□ -0.79
PTPN6-219	ENST00000542848	MOG	Q16653	247 aa		10.13	□□□□□ -0.79
PTPN6-219	ENST00000542848	HIST3H3	Q16695	136 aa		10.13	□□□□□ -0.79
PTPN6-219	ENST00000542848	TBC1D28	Q2M2D7	210 aa		10.13	□□□□□ -0.79
PTPN6-219	ENST00000542848	ACSM5	Q6NUN0	579 aa		10.13	□□□□□ -0.79
PTPN6-219	ENST00000542848	SHQ1	Q6PI26	577 aa	Known RBP	10.13	□□□□□ -0.79
PTPN6-219	ENST00000542848	USP43	Q70EL4	1123 aa		10.13	□□□□□ -0.79
PTPN6-219	ENST00000542848	SLC16A14	Q7RTX9	510 aa		10.13	□□□□□ -0.79
PTPN6-219	ENST00000542848	SLC30A8	Q8IWU4	369 aa		10.13	□□□□□ -0.79
PTPN6-219	ENST00000542848	DEFB107A	Q8IZN7	70 aa		10.13	□□□□□ -0.79
PTPN6-219	ENST00000542848	PAQR4	Q8N4S7	273 aa	Predicted RBP	10.13	□□□□□ -0.79
PTPN6-219	ENST00000542848	LRRC17	Q8N6Y2	441 aa		10.13	□□□□□ -0.79
PTPN6-219	ENST00000542848	GPR32P1	Q8NGA4	272 aa		10.13	□□□□□ -0.79
PTPN6-219	ENST00000542848	OR4K5	Q8NGD3	323 aa		10.13	□□□□□ -0.79
PTPN6-219	ENST00000542848	ADAMTS16	Q8TE57	1224 aa		10.13	□□□□□ -0.79
PTPN6-219	ENST00000542848	ZNF418	Q8TF45	676 aa	Predicted RBP	10.13	□□□□□ -0.79
PTPN6-219	ENST00000542848	SNX33	Q8WV41	574 aa		10.13	□□□□□ -0.79
PTPN6-219	ENST00000542848	C11orf40	Q8WZ69	217 aa		10.13	□□□□□ -0.79
PTPN6-219	ENST00000542848	SH3GL1	Q99961	368 aa		10.13	□□□□□ -0.79
PTPN6-219	ENST00000542848	ZNF426	Q9BUY5	554 aa		10.13	□□□□□ -0.79
PTPN6-219	ENST00000542848	CADM1	Q9BY67	442 aa	Known RBP	10.13	□□□□□ -0.79
PTPN6-219	ENST00000542848	BCL2L14	Q9BZR8	327 aa		10.13	□□□□□ -0.79
PTPN6-219	ENST00000542848	PCDHAC1	Q9H158	963 aa		10.13	□□□□□ -0.79
PTPN6-219	ENST00000542848	LPAR2	Q9HBW0	351 aa		10.13	□□□□□ -0.79
PTPN6-219	ENST00000542848	SLC7A7	Q9UM01	511 aa		10.13	□□□□□ -0.79
PTPN6-219	ENST00000542848	IQCM	A0A1B0GVH7	501 aa		10.12	□□□□□ -0.79
PTPN6-219	ENST00000542848	CENPBD1	B2RD01	187 aa		10.12	□□□□□ -0.79
PTPN6-219	ENST00000542848	FBP2	O00757	339 aa		10.12	□□□□□ -0.79
PTPN6-219	ENST00000542848	PNP	P00491	289 aa		10.12	□□□□□ -0.79
PTPN6-219	ENST00000542848	IGHG1	P01857	330 aa		10.12	□□□□□ -0.79
PTPN6-219	ENST00000542848	OPN1SW	P03999	348 aa		10.12	□□□□□ -0.79
PTPN6-219	ENST00000542848	LCK	P06239	509 aa		10.12	□□□□□ -0.79
PTPN6-219	ENST00000542848	CCL2	P13500	99 aa		10.12	□□□□□ -0.79
PTPN6-219	ENST00000542848	COMP	P49747	757 aa	Predicted RBP	10.12	□□□□□ -0.79
PTPN6-219	ENST00000542848	ZNF84	P51523	738 aa		10.12	□□□□□ -0.79
PTPN6-219	ENST00000542848	CLRN1	P58418	232 aa		10.12	□□□□□ -0.79
PTPN6-219	ENST00000542848	CCL8	P80075	99 aa		10.12	□□□□□ -0.79
PTPN6-219	ENST00000542848	PLP2	Q04941	152 aa		10.12	□□□□□ -0.79
PTPN6-219	ENST00000542848	RUNX1T1	Q06455	604 aa		10.12	□□□□□ -0.79
PTPN6-219	ENST00000542848	MELK	Q14680	651 aa		10.12	□□□□□ -0.79
PTPN6-219	ENST00000542848	CYP51A1	Q16850	503 aa		10.12	□□□□□ -0.79
PTPN6-219	ENST00000542848	ALKBH6	Q3KRA9	238 aa		10.12	□□□□□ -0.79
PTPN6-219	ENST00000542848	SAMD4B	Q5PRF9	694 aa	Known RBP	10.12	□□□□□ -0.79
PTPN6-219	ENST00000542848	FAHD2B	Q6P2I3	314 aa	Predicted RBP	10.12	□□□□□ -0.79
PTPN6-219	ENST00000542848	DHDDS	Q86SQ9	333 aa		10.12	□□□□□ -0.79
PTPN6-219	ENST00000542848	PATL1	Q86TB9	770 aa	Known RBP	10.12	□□□□□ -0.79
PTPN6-219	ENST00000542848	RBM45	Q8IUH3	476 aa	Known RBP	10.12	□□□□□ -0.79
PTPN6-219	ENST00000542848	C10orf67	Q8IYJ2	551 aa		10.12	□□□□□ -0.79
PTPN6-219	ENST00000542848	RASSF5	Q8WWW0	418 aa		10.12	□□□□□ -0.79
PTPN6-219	ENST00000542848	MCHR2	Q969V1	340 aa		10.12	□□□□□ -0.79
PTPN6-219	ENST00000542848	FAHD2A	Q96GK7	314 aa		10.12	□□□□□ -0.79
PTPN6-219	ENST00000542848	CGREF1	Q99674	301 aa		10.12	□□□□□ -0.79
PTPN6-219	ENST00000542848	THTPA	Q9BU02	230 aa		10.12	□□□□□ -0.79
PTPN6-219	ENST00000542848	MRPL13	Q9BYD1	178 aa	Known RBP	10.12	□□□□□ -0.79
PTPN6-219	ENST00000542848	ZNF665	Q9H7R5	613 aa		10.12	□□□□□ -0.79
PTPN6-219	ENST00000542848	G6PC2	Q9NQR9	355 aa		10.12	□□□□□ -0.79
PTPN6-219	ENST00000542848	PCDHB10	Q9UN67	800 aa		10.12	□□□□□ -0.79
PTPN6-219	ENST00000542848	IGHV1-69-2	A0A0G2JMI3	117 aa		10.11	□□□□□ -0.79
PTPN6-219	ENST00000542848		A0A1W2PRG6	482 aa		10.11	□□□□□ -0.79
PTPN6-219	ENST00000542848	ANKRD65	E5RJM6	399 aa		10.11	□□□□□ -0.79
PTPN6-219	ENST00000542848	BLOC1S5-TXNDC5	H3BN57	136 aa		10.11	□□□□□ -0.79
PTPN6-219	ENST00000542848	CDC14B	O60729	498 aa		10.11	□□□□□ -0.79
PTPN6-219	ENST00000542848	IGHV3-13	P01766	116 aa		10.11	□□□□□ -0.79
PTPN6-219	ENST00000542848	MT-ND5	P03915	603 aa		10.11	□□□□□ -0.79
PTPN6-219	ENST00000542848	MMP7	P09237	267 aa	Predicted RBP	10.11	□□□□□ -0.79
PTPN6-219	ENST00000542848	UMPS	P11172	480 aa		10.11	□□□□□ -0.79
PTPN6-219	ENST00000542848	CD247	P20963	164 aa		10.11	□□□□□ -0.79
PTPN6-219	ENST00000542848	ZNF133	P52736	654 aa	Predicted RBP	10.11	□□□□□ -0.79
PTPN6-219	ENST00000542848	PSME3	P61289	254 aa		10.11	□□□□□ -0.79
PTPN6-219	ENST00000542848	INTS11	Q5TA45	600 aa	Known RBP	10.11	□□□□□ -0.79
PTPN6-219	ENST00000542848	C8orf82	Q6P1X6	216 aa	Predicted RBP	10.11	□□□□□ -0.79
PTPN6-219	ENST00000542848	HDDC2	Q7Z4H3	204 aa		10.11	□□□□□ -0.79
PTPN6-219	ENST00000542848	NANOGNB	Q7Z5D8	188 aa		10.11	□□□□□ -0.79
PTPN6-219	ENST00000542848	OR8J3	Q8NGG0	315 aa		10.11	□□□□□ -0.79
PTPN6-219	ENST00000542848	OR4D11	Q8NGI4	311 aa		10.11	□□□□□ -0.79
PTPN6-219	ENST00000542848	VANGL1	Q8TAA9	524 aa	Predicted RBP	10.11	□□□□□ -0.79
PTPN6-219	ENST00000542848	SLC26A7	Q8TE54	656 aa		10.11	□□□□□ -0.79
PTPN6-219	ENST00000542848	FAM216A	Q8WUB2	273 aa		10.11	□□□□□ -0.79
PTPN6-219	ENST00000542848	RAB39B	Q96DA2	213 aa		10.11	□□□□□ -0.79
PTPN6-219	ENST00000542848	TSPAN32	Q96QS1	320 aa		10.11	□□□□□ -0.79
PTPN6-219	ENST00000542848	JMJD8	Q96S16	334 aa		10.11	□□□□□ -0.79
PTPN6-219	ENST00000542848	SEPHS2	Q99611	448 aa		10.11	□□□□□ -0.79
PTPN6-219	ENST00000542848	PRSS27	Q9BQR3	290 aa		10.11	□□□□□ -0.79
PTPN6-219	ENST00000542848	PLA2G12A	Q9BZM1	189 aa		10.11	□□□□□ -0.79
PTPN6-219	ENST00000542848	RASSF4	Q9H2L5	321 aa		10.11	□□□□□ -0.79
PTPN6-219	ENST00000542848	MUC13	Q9H3R2	512 aa		10.11	□□□□□ -0.79
PTPN6-219	ENST00000542848	KAT8	Q9H7Z6	458 aa	Known RBP	10.11	□□□□□ -0.79
PTPN6-219	ENST00000542848	DECR2	Q9NUI1	292 aa		10.11	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms