RNA–Protein interactions for RNA: ENST00000542663.1

CLSTN3-214, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-214ENST00000542663 BHLHE22Q8NFJ8 381 aaPredicted RBP15.04■□□□□ -0
CLSTN3-214ENST00000542663 GEMIN6Q8WXD5 167 aaKnown RBP15.04■□□□□ -0
CLSTN3-214ENST00000542663 ZBTB9Q96C00 473 aa15.04■□□□□ -0
CLSTN3-214ENST00000542663 TRIM44Q96DX7 344 aaPredicted RBP15.04■□□□□ -0
CLSTN3-214ENST00000542663 MCHR1Q99705 422 aa15.04■□□□□ -0
CLSTN3-214ENST00000542663 GPA33Q99795 319 aa15.04■□□□□ -0
CLSTN3-214ENST00000542663 SLITRK2Q9H156 845 aa15.04■□□□□ -0
CLSTN3-214ENST00000542663 LRMDAQ9H2I8 198 aa15.04■□□□□ -0
CLSTN3-214ENST00000542663 AUP1Q9Y679 476 aa15.04■□□□□ -0
CLSTN3-214ENST00000542663 NOTCH1P46531 2555 aa15.04■□□□□ -0
CLSTN3-214ENST00000542663 LOC100509620A0A075B734 347 aa15.03■□□□□ -0
CLSTN3-214ENST00000542663 PRORSD1PA6NEY8 169 aa15.03■□□□□ -0
CLSTN3-214ENST00000542663 M0R3H8 397 aa15.03■□□□□ -0
CLSTN3-214ENST00000542663 MGRN1O60291 552 aa15.03■□□□□ -0
CLSTN3-214ENST00000542663 ASAH2BP0C7U1 165 aa15.03■□□□□ -0
CLSTN3-214ENST00000542663 ZNF12P17014 697 aa15.03■□□□□ -0
CLSTN3-214ENST00000542663 MDKP21741 143 aaPredicted RBP15.03■□□□□ -0
CLSTN3-214ENST00000542663 CCNOP22674 350 aa15.03■□□□□ -0
CLSTN3-214ENST00000542663 STOMP27105 288 aa15.03■□□□□ -0
CLSTN3-214ENST00000542663 APLNRP35414 380 aa15.03■□□□□ -0
CLSTN3-214ENST00000542663 SLC3A1Q07837 685 aa15.03■□□□□ -0
CLSTN3-214ENST00000542663 NPTX1Q15818 432 aa15.03■□□□□ -0
CLSTN3-214ENST00000542663 ZNF718Q3SXZ3 478 aa15.03■□□□□ -0
CLSTN3-214ENST00000542663 CEP85LQ5SZL2 805 aa15.03■□□□□ -0
CLSTN3-214ENST00000542663 MBNL2Q5VZF2 373 aaKnown RBP15.03■□□□□ -0
CLSTN3-214ENST00000542663 ZNF613Q6PF04 617 aa15.03■□□□□ -0
CLSTN3-214ENST00000542663 TSPYL5Q86VY4 417 aaPredicted RBP15.03■□□□□ -0
CLSTN3-214ENST00000542663 ARMC8Q8IUR7 673 aa15.03■□□□□ -0
CLSTN3-214ENST00000542663 MREGQ8N565 214 aa15.03■□□□□ -0
CLSTN3-214ENST00000542663 SLC25A40Q8TBP6 338 aa15.03■□□□□ -0
CLSTN3-214ENST00000542663 KLF14Q8TD94 323 aaPredicted RBP15.03■□□□□ -0
CLSTN3-214ENST00000542663 POM121L2Q96KW2 1035 aa15.03■□□□□ -0
CLSTN3-214ENST00000542663 SEPHS2Q99611 448 aa15.03■□□□□ -0
CLSTN3-214ENST00000542663 MRPL13Q9BYD1 178 aaKnown RBP15.03■□□□□ -0
CLSTN3-214ENST00000542663 TMEM38AQ9H6F2 299 aa15.03■□□□□ -0
CLSTN3-214ENST00000542663 SLCO1B3Q9NPD5 702 aa15.03■□□□□ -0
CLSTN3-214ENST00000542663 NANSQ9NR45 359 aa15.03■□□□□ -0
CLSTN3-214ENST00000542663 VAPAQ9P0L0 249 aa15.03■□□□□ -0
CLSTN3-214ENST00000542663 KLHL21Q9UJP4 597 aa15.03■□□□□ -0
CLSTN3-214ENST00000542663 INSIG2Q9Y5U4 225 aa15.03■□□□□ -0
CLSTN3-214ENST00000542663 NPTNQ9Y639 398 aa15.03■□□□□ -0
CLSTN3-214ENST00000542663 GMEB1Q9Y692 573 aa15.03■□□□□ -0
CLSTN3-214ENST00000542663 TRBV5-3A0A0A0MS03 114 aa15.02■□□□□ -0
CLSTN3-214ENST00000542663 PLSCR5A0PG75 271 aa15.02■□□□□ -0
CLSTN3-214ENST00000542663 CLDN34H7C241 214 aa15.02■□□□□ -0
CLSTN3-214ENST00000542663 IGHG1P01857 330 aa15.02■□□□□ -0
CLSTN3-214ENST00000542663 IGHMP01871 453 aa15.02■□□□□ -0
CLSTN3-214ENST00000542663 GCH1P30793 250 aa15.02■□□□□ -0
CLSTN3-214ENST00000542663 ZNF133P52736 654 aaPredicted RBP15.02■□□□□ -0
CLSTN3-214ENST00000542663 CLRN1P58418 232 aa15.02■□□□□ -0
CLSTN3-214ENST00000542663 HSF2Q03933 536 aa15.02■□□□□ -0
CLSTN3-214ENST00000542663 SLC9A3R2Q15599 337 aa15.02■□□□□ -0
CLSTN3-214ENST00000542663 FUNDC1Q8IVP5 155 aa15.02■□□□□ -0
CLSTN3-214ENST00000542663 ANKRD42Q8N9B4 389 aa15.02■□□□□ -0
CLSTN3-214ENST00000542663 SMYD1Q8NB12 490 aa15.02■□□□□ -0
CLSTN3-214ENST00000542663 NOXO1Q8NFA2 376 aa15.02■□□□□ -0
CLSTN3-214ENST00000542663 SLC25A28Q96A46 364 aa15.02■□□□□ -0
CLSTN3-214ENST00000542663 ZNF607Q96SK3 696 aa15.02■□□□□ -0
CLSTN3-214ENST00000542663 ARHGDIGQ99819 225 aa15.02■□□□□ -0
CLSTN3-214ENST00000542663 OR2J1Q9GZK6 312 aa15.02■□□□□ -0
CLSTN3-214ENST00000542663 ZNF229Q9UJW7 825 aa15.02■□□□□ -0
CLSTN3-214ENST00000542663 SOX21Q9Y651 276 aaPredicted RBP15.02■□□□□ -0
CLSTN3-214ENST00000542663 WNK1Q9H4A3 2382 aa15.02□□□□□ -0.01
CLSTN3-214ENST00000542663 CPSF4LA6NMK7 179 aaKnown RBP15.01□□□□□ -0.01
CLSTN3-214ENST00000542663 KPNA4O00629 521 aaPredicted RBP15.01□□□□□ -0.01
CLSTN3-214ENST00000542663 FMO6PO60774 539 aa15.01□□□□□ -0.01
CLSTN3-214ENST00000542663 CD55P08174 381 aa15.01□□□□□ -0.01
CLSTN3-214ENST00000542663 SBK2P0C263 348 aa15.01□□□□□ -0.01
CLSTN3-214ENST00000542663 ZNF32P17041 273 aa15.01□□□□□ -0.01
CLSTN3-214ENST00000542663 GPX2P18283 190 aa15.01□□□□□ -0.01
CLSTN3-214ENST00000542663 SLC6A9P48067 706 aa15.01□□□□□ -0.01
CLSTN3-214ENST00000542663 ZNF84P51523 738 aa15.01□□□□□ -0.01
CLSTN3-214ENST00000542663 DUSP7Q16829 419 aa15.01□□□□□ -0.01
CLSTN3-214ENST00000542663 PAGE3Q5JUK9 113 aa15.01□□□□□ -0.01
CLSTN3-214ENST00000542663 ENTPD8Q5MY95 495 aa15.01□□□□□ -0.01
CLSTN3-214ENST00000542663 C10orf128Q5T292 105 aa15.01□□□□□ -0.01
CLSTN3-214ENST00000542663 LEG1Q6P5S2 330 aa15.01□□□□□ -0.01
CLSTN3-214ENST00000542663 RFPL4BQ6ZWI9 263 aa15.01□□□□□ -0.01
CLSTN3-214ENST00000542663 OR4D11Q8NGI4 311 aa15.01□□□□□ -0.01
CLSTN3-214ENST00000542663 OR6T1Q8NGN1 323 aa15.01□□□□□ -0.01
CLSTN3-214ENST00000542663 NABP1Q96AH0 204 aa15.01□□□□□ -0.01
CLSTN3-214ENST00000542663 DCLRE1CQ96SD1 692 aaKnown RBP15.01□□□□□ -0.01
CLSTN3-214ENST00000542663 ZNF426Q9BUY5 554 aa15.01□□□□□ -0.01
CLSTN3-214ENST00000542663 EGLN1Q9GZT9 426 aa15.01□□□□□ -0.01
CLSTN3-214ENST00000542663 EVA1AQ9H8M9 152 aa15.01□□□□□ -0.01
CLSTN3-214ENST00000542663 PATZ1Q9HBE1 687 aaKnown RBP15.01□□□□□ -0.01
CLSTN3-214ENST00000542663 EGFL7Q9UHF1 273 aa15.01□□□□□ -0.01
CLSTN3-214ENST00000542663 SLC13A4Q9UKG4 626 aa15.01□□□□□ -0.01
CLSTN3-214ENST00000542663 UGT2A1Q9Y4X1 527 aa15.01□□□□□ -0.01
CLSTN3-214ENST00000542663 C5orf49A4QMS7 147 aa15□□□□□ -0.01
CLSTN3-214ENST00000542663 A8MXK9 166 aa15□□□□□ -0.01
CLSTN3-214ENST00000542663 SERPINB7O75635 380 aa15□□□□□ -0.01
CLSTN3-214ENST00000542663 SLC6A2P23975 617 aa15□□□□□ -0.01
CLSTN3-214ENST00000542663 CDAP32320 146 aa15□□□□□ -0.01
CLSTN3-214ENST00000542663 SRSF4Q08170 494 aaKnown RBP15□□□□□ -0.01
CLSTN3-214ENST00000542663 OCLNQ16625 522 aa15□□□□□ -0.01
CLSTN3-214ENST00000542663 TTC33Q6PID6 262 aaPredicted RBP15□□□□□ -0.01
CLSTN3-214ENST00000542663 RBM45Q8IUH3 476 aaKnown RBP15□□□□□ -0.01
CLSTN3-214ENST00000542663 GPR32P1Q8NGA4 272 aa15□□□□□ -0.01
CLSTN3-214ENST00000542663 AKR7LQ8NHP1 331 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms