RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 MED11Q9P086 117 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 RPS6KB2Q9UBS0 482 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 WNT16Q9UBV4 365 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 FBXW2Q9UKT8 454 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 RASD1Q9Y272 281 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 ENPP4Q9Y6X5 453 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 TRDV1A0A1B0GX56 115 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 DISC1C4P0D8 188 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 GPR31O00270 319 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 PF4P02776 101 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 CRYBA1P05813 215 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 GIMD1P0DJR0 217 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 PVRP15151 417 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 CD27P26842 260 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 PTGER1P34995 402 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 LIMS1P48059 325 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 NCBP2P52298 156 aaKnown RBP eCLIP7.27□□□□□ -1.252e-10■□□□□ 8.4
PDLIM5-221ENST00000542407 AKR1C2P52895 323 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 PSMA6P60900 246 aaKnown RBP7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 RAB5BP61020 215 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 BTN3A2P78410 334 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 AKR1C1Q04828 323 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 FUT5Q11128 374 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 BIKQ13323 160 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 HNF4GQ14541 408 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 GINS1Q14691 196 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 ADIPOQQ15848 244 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 SLC36A2Q495M3 483 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 GXYLT1Q4G148 440 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 DCST1Q5T197 706 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 REEP3Q6NUK4 255 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 ESPNLQ6ZVH7 1005 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 Q7L0L9 218 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 LINGO2Q7L985 606 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 PRSS45Q7RTY3 260 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 HSD17B13Q7Z5P4 300 aaPredicted RBP7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 IZUMO1Q8IYV9 350 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 BPIFCQ8NFQ6 507 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 SFXN5Q8TD22 340 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 TCTEX1D2Q8WW35 142 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 WNT2BQ93097 391 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 CPNE2Q96FN4 548 aaPredicted RBP7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 TMEM19Q96HH6 336 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 ZNF582Q96NG8 517 aaPredicted RBP7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 TSNAXQ99598 290 aaKnown RBP7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 FUZQ9BT04 418 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 SUCNR1Q9BXA5 334 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 PRDM13Q9H4Q3 707 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 CA10Q9NS85 328 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 ING1Q9UK53 422 aaPredicted RBP7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 ANGPT4Q9Y264 503 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 CHST2Q9Y4C5 530 aa7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 ARHGEF17Q96PE2 2063 aaPredicted RBP7.27□□□□□ -1.25
PDLIM5-221ENST00000542407 A0A0J9YY10 115 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 MCRIP1C9JLW8 97 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 HCRTR1O43613 425 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 BCHEP06276 602 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 OR12D1P0DN82 309 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 NME1P15531 152 aaKnown RBP7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 PSMB6P28072 239 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 ADH6P28332 368 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 NTSP30990 170 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 FGF9P31371 208 aaPredicted RBP7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 S100A11P31949 105 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 FGF8P55075 233 aaPredicted RBP7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 OR10A3P58181 314 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 PKIAP61925 76 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 RUNX2Q13950 521 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 SLC9A3R2Q15599 337 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 LINC01559Q495D7 138 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 C14orf28Q4W4Y0 310 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 HIKESHIQ53FT3 197 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 NHLRC1Q6VVB1 395 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 TMUB2Q71RG4 321 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 PXKQ7Z7A4 578 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 NR2C2APQ86WQ0 139 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 LRRC28Q86X40 367 aaPredicted RBP7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 ZNF761Q86XN6 746 aaPredicted RBP7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 DEFB119Q8N690 84 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 CADM4Q8NFZ8 388 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 GPR32P1Q8NGA4 272 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 RAB8BQ92930 207 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 RAB24Q969Q5 203 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 RCC1LQ96I51 464 aaKnown RBP7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 C20orf85Q9H1P6 137 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 PCED1AQ9H1Q7 454 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 BCO1Q9HAY6 547 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 CYSLTR2Q9NS75 346 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 RXFP3Q9NSD7 469 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 NTMQ9P121 344 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 SLC5A6Q9Y289 635 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 CBY3A6NI87 242 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 TSTD3H0UI37 97 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 SOX15O60248 233 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 SEMA7AO75326 666 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 ERAL1O75616 437 aaKnown RBP7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 IGF2P01344 180 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 SLC35G6P0C7Q6 338 aa7.26□□□□□ -1.25
PDLIM5-221ENST00000542407 LUMP51884 338 aaPredicted RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms