RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 FARS2O95363 451 aaKnown RBP13.1□□□□□ -0.31
CLSTN3-213ENST00000541953 UMPSP11172 480 aa13.1□□□□□ -0.31
CLSTN3-213ENST00000541953 ZNF32P17041 273 aa13.1□□□□□ -0.31
CLSTN3-213ENST00000541953 FUT1P19526 365 aa13.1□□□□□ -0.31
CLSTN3-213ENST00000541953 FUT4P22083 530 aa13.1□□□□□ -0.31
CLSTN3-213ENST00000541953 CCNOP22674 350 aa13.1□□□□□ -0.31
CLSTN3-213ENST00000541953 CLRN1P58418 232 aa13.1□□□□□ -0.31
CLSTN3-213ENST00000541953 TUSC1Q2TAM9 212 aa13.1□□□□□ -0.31
CLSTN3-213ENST00000541953 PCGF3Q3KNV8 242 aa13.1□□□□□ -0.31
CLSTN3-213ENST00000541953 SLC36A2Q495M3 483 aa13.1□□□□□ -0.31
CLSTN3-213ENST00000541953 THEM4Q5T1C6 240 aa13.1□□□□□ -0.31
CLSTN3-213ENST00000541953 TTC33Q6PID6 262 aaPredicted RBP13.1□□□□□ -0.31
CLSTN3-213ENST00000541953 NANOGNBQ7Z5D8 188 aa13.1□□□□□ -0.31
CLSTN3-213ENST00000541953 NKAIN4Q8IVV8 208 aa13.1□□□□□ -0.31
CLSTN3-213ENST00000541953 C11orf65Q8NCR3 313 aa13.1□□□□□ -0.31
CLSTN3-213ENST00000541953 AKR7LQ8NHP1 331 aa13.1□□□□□ -0.31
CLSTN3-213ENST00000541953 C11orf40Q8WZ69 217 aa13.1□□□□□ -0.31
CLSTN3-213ENST00000541953 HDAC2Q92769 488 aaKnown RBP13.1□□□□□ -0.31
CLSTN3-213ENST00000541953 RAB39BQ96DA2 213 aa13.1□□□□□ -0.31
CLSTN3-213ENST00000541953 ZMYND19Q96E35 227 aaPredicted RBP13.1□□□□□ -0.31
CLSTN3-213ENST00000541953 MARS2Q96GW9 593 aaKnown RBP13.1□□□□□ -0.31
CLSTN3-213ENST00000541953 C1orf147Q96MC9 270 aaPredicted RBP13.1□□□□□ -0.31
CLSTN3-213ENST00000541953 C7orf26Q96N11 449 aa13.1□□□□□ -0.31
CLSTN3-213ENST00000541953 SLCO1C1Q9NYB5 712 aa13.1□□□□□ -0.31
CLSTN3-213ENST00000541953 SLC22A23A1A5C7 686 aa13.09□□□□□ -0.31
CLSTN3-213ENST00000541953 TRAPPC13A5PLN9 417 aa13.09□□□□□ -0.31
CLSTN3-213ENST00000541953 EVPLLA8MZ36 301 aa13.09□□□□□ -0.31
CLSTN3-213ENST00000541953 TPD52L2O43399 206 aaKnown RBP13.09□□□□□ -0.31
CLSTN3-213ENST00000541953 SHOX2O60902 331 aaPredicted RBP13.09□□□□□ -0.31
CLSTN3-213ENST00000541953 BCL10O95999 233 aa13.09□□□□□ -0.31
CLSTN3-213ENST00000541953 IGHG1P01857 330 aa13.09□□□□□ -0.31
CLSTN3-213ENST00000541953 AQP2P41181 271 aa13.09□□□□□ -0.31
CLSTN3-213ENST00000541953 RAD52P43351 418 aa13.09□□□□□ -0.31
CLSTN3-213ENST00000541953 ZNF81P51508 661 aa13.09□□□□□ -0.31
CLSTN3-213ENST00000541953 ZNF133P52736 654 aaPredicted RBP13.09□□□□□ -0.31
CLSTN3-213ENST00000541953 SEC61A1P61619 476 aaKnown RBP13.09□□□□□ -0.31
CLSTN3-213ENST00000541953 CYP51A1Q16850 503 aa13.09□□□□□ -0.31
CLSTN3-213ENST00000541953 C10orf128Q5T292 105 aa13.09□□□□□ -0.31
CLSTN3-213ENST00000541953 DHDDSQ86SQ9 333 aa13.09□□□□□ -0.31
CLSTN3-213ENST00000541953 DEFB108BQ8NET1 73 aa13.09□□□□□ -0.31
CLSTN3-213ENST00000541953 SGMS2Q8NHU3 365 aa13.09□□□□□ -0.31
CLSTN3-213ENST00000541953 SLC25A40Q8TBP6 338 aa13.09□□□□□ -0.31
CLSTN3-213ENST00000541953 TMEM255BQ8WV15 326 aa13.09□□□□□ -0.31
CLSTN3-213ENST00000541953 CCL17Q92583 94 aa13.09□□□□□ -0.31
CLSTN3-213ENST00000541953 POM121L2Q96KW2 1035 aa13.09□□□□□ -0.31
CLSTN3-213ENST00000541953 CCDC28BQ9BUN5 200 aa13.09□□□□□ -0.31
CLSTN3-213ENST00000541953 SUCNR1Q9BXA5 334 aa13.09□□□□□ -0.31
CLSTN3-213ENST00000541953 BCL2L14Q9BZR8 327 aa13.09□□□□□ -0.31
CLSTN3-213ENST00000541953 OR2J1Q9GZK6 312 aa13.09□□□□□ -0.31
CLSTN3-213ENST00000541953 PCDHAC1Q9H158 963 aa13.09□□□□□ -0.31
CLSTN3-213ENST00000541953 POFUT1Q9H488 388 aa13.09□□□□□ -0.31
CLSTN3-213ENST00000541953 C7orf69Q9H7B7 122 aa13.09□□□□□ -0.31
CLSTN3-213ENST00000541953 NPHS2Q9NP85 383 aa13.09□□□□□ -0.31
CLSTN3-213ENST00000541953 MMP26Q9NRE1 261 aa13.09□□□□□ -0.31
CLSTN3-213ENST00000541953 DECR2Q9NUI1 292 aa13.09□□□□□ -0.31
CLSTN3-213ENST00000541953 UBAP1Q9NZ09 502 aa13.09□□□□□ -0.31
CLSTN3-213ENST00000541953 LEF1Q9UJU2 399 aaPredicted RBP13.09□□□□□ -0.31
CLSTN3-213ENST00000541953 TMPRSS2O15393 492 aa13.08□□□□□ -0.32
CLSTN3-213ENST00000541953 PIP5K1CO60331 668 aa13.08□□□□□ -0.32
CLSTN3-213ENST00000541953 NGFP01138 241 aa13.08□□□□□ -0.32
CLSTN3-213ENST00000541953 ACADSP16219 412 aa13.08□□□□□ -0.32
CLSTN3-213ENST00000541953 STOMP27105 288 aa13.08□□□□□ -0.32
CLSTN3-213ENST00000541953 GZMMP51124 257 aa13.08□□□□□ -0.32
CLSTN3-213ENST00000541953 ERVK-25P63136 954 aa13.08□□□□□ -0.32
CLSTN3-213ENST00000541953 PSG4Q00888 419 aa13.08□□□□□ -0.32
CLSTN3-213ENST00000541953 HSF2Q03933 536 aa13.08□□□□□ -0.32
CLSTN3-213ENST00000541953 SCGB2A2Q13296 93 aa13.08□□□□□ -0.32
CLSTN3-213ENST00000541953 HFEQ30201 348 aa13.08□□□□□ -0.32
CLSTN3-213ENST00000541953 KLF17Q5JT82 389 aaPredicted RBP13.08□□□□□ -0.32
CLSTN3-213ENST00000541953 ARMC4Q5T2S8 1044 aa13.08□□□□□ -0.32
CLSTN3-213ENST00000541953 CROCCP2Q86T23 111 aa13.08□□□□□ -0.32
CLSTN3-213ENST00000541953 BCL6BQ8N143 479 aaPredicted RBP13.08□□□□□ -0.32
CLSTN3-213ENST00000541953 BPIFB2Q8N4F0 458 aa13.08□□□□□ -0.32
CLSTN3-213ENST00000541953 SIGLECL1Q8N7X8 197 aa13.08□□□□□ -0.32
CLSTN3-213ENST00000541953 THOC1Q96FV9 657 aaKnown RBP13.08□□□□□ -0.32
CLSTN3-213ENST00000541953 ZNF48Q96MX3 618 aaPredicted RBP13.08□□□□□ -0.32
CLSTN3-213ENST00000541953 CGREF1Q99674 301 aa13.08□□□□□ -0.32
CLSTN3-213ENST00000541953 GAL3ST1Q99999 423 aa13.08□□□□□ -0.32
CLSTN3-213ENST00000541953 C1orf198Q9H425 327 aa13.08□□□□□ -0.32
CLSTN3-213ENST00000541953 KAT8Q9H7Z6 458 aaKnown RBP13.08□□□□□ -0.32
CLSTN3-213ENST00000541953 MSL2Q9HCI7 577 aa13.08□□□□□ -0.32
CLSTN3-213ENST00000541953 CORO2BQ9UQ03 480 aa13.08□□□□□ -0.32
CLSTN3-213ENST00000541953 SOX21Q9Y651 276 aaPredicted RBP13.08□□□□□ -0.32
CLSTN3-213ENST00000541953 VWFP04275 2813 aa13.07□□□□□ -0.32
CLSTN3-213ENST00000541953 IQCMA0A1B0GVH7 501 aa13.07□□□□□ -0.32
CLSTN3-213ENST00000541953 ISPDA4D126 451 aa13.07□□□□□ -0.32
CLSTN3-213ENST00000541953 C5orf49A4QMS7 147 aa13.07□□□□□ -0.32
CLSTN3-213ENST00000541953 J3QLI3 93 aa13.07□□□□□ -0.32
CLSTN3-213ENST00000541953 TGDSO95455 350 aa13.07□□□□□ -0.32
CLSTN3-213ENST00000541953 ANPEPP15144 967 aa13.07□□□□□ -0.32
CLSTN3-213ENST00000541953 DRD4P21917 467 aa13.07□□□□□ -0.32
CLSTN3-213ENST00000541953 APLNRP35414 380 aa13.07□□□□□ -0.32
CLSTN3-213ENST00000541953 ATP4BP51164 291 aa13.07□□□□□ -0.32
CLSTN3-213ENST00000541953 SELENOVP59797 346 aa13.07□□□□□ -0.32
CLSTN3-213ENST00000541953 NRN1LQ496H8 165 aa13.07□□□□□ -0.32
CLSTN3-213ENST00000541953 NANPQ8TBE9 248 aa13.07□□□□□ -0.32
CLSTN3-213ENST00000541953 KLF14Q8TD94 323 aaPredicted RBP13.07□□□□□ -0.32
CLSTN3-213ENST00000541953 NSMAFQ92636 917 aa13.07□□□□□ -0.32
CLSTN3-213ENST00000541953 LRRC58Q96CX6 371 aa13.07□□□□□ -0.32
CLSTN3-213ENST00000541953 ELMOD3Q96FG2 381 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms