RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 ARMC7Q9H6L4 198 aa7.79□□□□□ -1.16
YBX3-211ENST00000541351 MID1IP1Q9NPA3 183 aa7.79□□□□□ -1.16
YBX3-211ENST00000541351 SLC17A7Q9P2U7 560 aa7.79□□□□□ -1.16
YBX3-211ENST00000541351 B3GAT1Q9P2W7 334 aa7.79□□□□□ -1.16
YBX3-211ENST00000541351 KPTNQ9Y664 436 aa7.79□□□□□ -1.16
YBX3-211ENST00000541351 NPHS1O60500 1241 aa7.78□□□□□ -1.16
YBX3-211ENST00000541351 ECDO95905 644 aaPredicted RBP7.78□□□□□ -1.16
YBX3-211ENST00000541351 SDC1P18827 310 aa7.78□□□□□ -1.16
YBX3-211ENST00000541351 NCF2P19878 526 aaPredicted RBP7.78□□□□□ -1.16
YBX3-211ENST00000541351 IMPDH1P20839 514 aa7.78□□□□□ -1.16
YBX3-211ENST00000541351 SLC6A2P23975 617 aa7.78□□□□□ -1.16
YBX3-211ENST00000541351 STOMP27105 288 aa7.78□□□□□ -1.16
YBX3-211ENST00000541351 CHATP28329 748 aa7.78□□□□□ -1.16
YBX3-211ENST00000541351 MPV17P39210 176 aa7.78□□□□□ -1.16
YBX3-211ENST00000541351 SRP9P49458 86 aaKnown RBP7.78□□□□□ -1.16
YBX3-211ENST00000541351 GDI2P50395 445 aaKnown RBP7.78□□□□□ -1.16
YBX3-211ENST00000541351 ZNF181Q2M3W8 571 aa7.78□□□□□ -1.16
YBX3-211ENST00000541351 GPAT3Q53EU6 434 aa7.78□□□□□ -1.16
YBX3-211ENST00000541351 UNC50Q53HI1 259 aa7.78□□□□□ -1.16
YBX3-211ENST00000541351 ARSJQ5FYB0 599 aaPredicted RBP7.78□□□□□ -1.16
YBX3-211ENST00000541351 SPATA46Q5T0L3 261 aa7.78□□□□□ -1.16
YBX3-211ENST00000541351 FAM69AQ5T7M9 428 aa7.78□□□□□ -1.16
YBX3-211ENST00000541351 METAP1DQ6UB28 335 aaPredicted RBP7.78□□□□□ -1.16
YBX3-211ENST00000541351 IGFN1Q86VF2 1251 aa7.78□□□□□ -1.16
YBX3-211ENST00000541351 SLC25A40Q8TBP6 338 aa7.78□□□□□ -1.16
YBX3-211ENST00000541351 SLC7A13Q8TCU3 470 aa7.78□□□□□ -1.16
YBX3-211ENST00000541351 ITLN1Q8WWA0 313 aa7.78□□□□□ -1.16
YBX3-211ENST00000541351 XAGE5Q8WWM1 108 aa7.78□□□□□ -1.16
YBX3-211ENST00000541351 ROPN1LQ96C74 230 aa7.78□□□□□ -1.16
YBX3-211ENST00000541351 TUBGCP3Q96CW5 907 aa7.78□□□□□ -1.16
YBX3-211ENST00000541351 RCHY1Q96PM5 261 aa7.78□□□□□ -1.16
YBX3-211ENST00000541351 OR2V2Q96R30 315 aa7.78□□□□□ -1.16
YBX3-211ENST00000541351 CDADC1Q9BWV3 514 aa7.78□□□□□ -1.16
YBX3-211ENST00000541351 TRIM31Q9BZY9 425 aa7.78□□□□□ -1.16
YBX3-211ENST00000541351 ZMAT4Q9H898 229 aa7.78□□□□□ -1.16
YBX3-211ENST00000541351 CACYBPQ9HB71 228 aaKnown RBP7.78□□□□□ -1.16
YBX3-211ENST00000541351 GCM1Q9NP62 436 aa7.78□□□□□ -1.16
YBX3-211ENST00000541351 TRIM36Q9NQ86 728 aa7.78□□□□□ -1.16
YBX3-211ENST00000541351 C22orf46C9J442 243 aa7.77□□□□□ -1.17
YBX3-211ENST00000541351 FTCDNL1E5RQL4 147 aa7.77□□□□□ -1.17
YBX3-211ENST00000541351 M0R082 166 aa7.77□□□□□ -1.17
YBX3-211ENST00000541351 FZD7O75084 574 aa7.77□□□□□ -1.17
YBX3-211ENST00000541351 NPIPB7O75200 414 aa7.77□□□□□ -1.17
YBX3-211ENST00000541351 BCAS1O75363 584 aaPredicted RBP7.77□□□□□ -1.17
YBX3-211ENST00000541351 LYPLA1O75608 230 aaPredicted RBP7.77□□□□□ -1.17
YBX3-211ENST00000541351 C6orf47O95873 294 aa7.77□□□□□ -1.17
YBX3-211ENST00000541351 OPN1SWP03999 348 aa7.77□□□□□ -1.17
YBX3-211ENST00000541351 CHRM2P08172 466 aa7.77□□□□□ -1.17
YBX3-211ENST00000541351 PATE4P0C8F1 98 aa7.77□□□□□ -1.17
YBX3-211ENST00000541351 RPS5P46782 204 aaKnown RBP7.77□□□□□ -1.17
YBX3-211ENST00000541351 PPP1CBP62140 327 aa7.77□□□□□ -1.17
YBX3-211ENST00000541351 BNIP2Q12982 314 aa7.77□□□□□ -1.17
YBX3-211ENST00000541351 KIAA0040Q15053 153 aa7.77□□□□□ -1.17
YBX3-211ENST00000541351 TAF11Q15544 211 aa7.77□□□□□ -1.17
YBX3-211ENST00000541351 PHYHD1Q5SRE7 291 aa7.77□□□□□ -1.17
YBX3-211ENST00000541351 ZFAND6Q6FIF0 208 aa7.77□□□□□ -1.17
YBX3-211ENST00000541351 KCTD18Q6PI47 426 aaPredicted RBP7.77□□□□□ -1.17
YBX3-211ENST00000541351 C6orf120Q7Z4R8 191 aa7.77□□□□□ -1.17
YBX3-211ENST00000541351 ALDH16A1Q8IZ83 802 aa7.77□□□□□ -1.17
YBX3-211ENST00000541351 SCAIQ8N9R8 606 aa7.77□□□□□ -1.17
YBX3-211ENST00000541351 NPEPL1Q8NDH3 523 aa7.77□□□□□ -1.17
YBX3-211ENST00000541351 OR5AK3PQ8NH89 298 aa7.77□□□□□ -1.17
YBX3-211ENST00000541351 ZNF417Q8TAU3 575 aa7.77□□□□□ -1.17
YBX3-211ENST00000541351 ABHD4Q8TB40 342 aa7.77□□□□□ -1.17
YBX3-211ENST00000541351 MIPOL1Q8TD10 442 aa7.77□□□□□ -1.17
YBX3-211ENST00000541351 SLC38A4Q969I6 547 aa7.77□□□□□ -1.17
YBX3-211ENST00000541351 ISOC1Q96CN7 298 aa7.77□□□□□ -1.17
YBX3-211ENST00000541351 DMRTB1Q96MA1 342 aa7.77□□□□□ -1.17
YBX3-211ENST00000541351 KCNA7Q96RP8 456 aa7.77□□□□□ -1.17
YBX3-211ENST00000541351 ZNF587Q96SQ5 575 aaPredicted RBP7.77□□□□□ -1.17
YBX3-211ENST00000541351 OSBPL9Q96SU4 736 aa7.77□□□□□ -1.17
YBX3-211ENST00000541351 SIRPDQ9H106 197 aa7.77□□□□□ -1.17
YBX3-211ENST00000541351 CCNB1IP1Q9NPC3 277 aa7.77□□□□□ -1.17
YBX3-211ENST00000541351 TMEM38BQ9NVV0 291 aa7.77□□□□□ -1.17
YBX3-211ENST00000541351 C5orf49A4QMS7 147 aa7.76□□□□□ -1.17
YBX3-211ENST00000541351 ADARB2-AS1A8MUL3 147 aa7.76□□□□□ -1.17
YBX3-211ENST00000541351 H3BUX3 64 aa7.76□□□□□ -1.17
YBX3-211ENST00000541351 F2RL2O00254 374 aa7.76□□□□□ -1.17
YBX3-211ENST00000541351 LSM1O15116 133 aaKnown RBP7.76□□□□□ -1.17
YBX3-211ENST00000541351 NDUFA2O43678 99 aa7.76□□□□□ -1.17
YBX3-211ENST00000541351 CHEK2O96017 543 aa7.76□□□□□ -1.17
YBX3-211ENST00000541351 DBIP07108 87 aaKnown RBP7.76□□□□□ -1.17
YBX3-211ENST00000541351 ZNF26P17031 533 aaPredicted RBP7.76□□□□□ -1.17
YBX3-211ENST00000541351 ATP5F1P24539 256 aaPredicted RBP7.76□□□□□ -1.17
YBX3-211ENST00000541351 ZNF84P51523 738 aa7.76□□□□□ -1.17
YBX3-211ENST00000541351 GP2P55259 537 aaKnown RBP7.76□□□□□ -1.17
YBX3-211ENST00000541351 ARF6P62330 175 aa7.76□□□□□ -1.17
YBX3-211ENST00000541351 RPS26P62854 115 aaKnown RBP7.76□□□□□ -1.17
YBX3-211ENST00000541351 TXNL4AP83876 142 aaKnown RBP7.76□□□□□ -1.17
YBX3-211ENST00000541351 AANATQ16613 207 aa7.76□□□□□ -1.17
YBX3-211ENST00000541351 SMU1Q2TAY7 513 aa7.76□□□□□ -1.17
YBX3-211ENST00000541351 CDONQ4KMG0 1287 aa7.76□□□□□ -1.17
YBX3-211ENST00000541351 PDCD4Q53EL6 469 aaKnown RBP7.76□□□□□ -1.17
YBX3-211ENST00000541351 TCTEX1D4Q5JR98 221 aa7.76□□□□□ -1.17
YBX3-211ENST00000541351 NKAPLQ5M9Q1 402 aa7.76□□□□□ -1.17
YBX3-211ENST00000541351 ATG16L1Q676U5 607 aa7.76□□□□□ -1.17
YBX3-211ENST00000541351 PEX5LQ8IYB4 626 aa7.76□□□□□ -1.17
YBX3-211ENST00000541351 CLHC1Q8NHS4 586 aa7.76□□□□□ -1.17
YBX3-211ENST00000541351 C10orf82Q8WW14 230 aa7.76□□□□□ -1.17
YBX3-211ENST00000541351 MRRFQ96E11 262 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms